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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24434_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_regulator_1,_partial_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
Transcript
Level		FPKM:23.29 TPM:14.86
ORF EntryO_SariMSG11217_complete:A_SariMSG_c24434_g1_i2
Sequence
(Nucleotide)
GGGGGTCCGGGTCCCGCGAACGCCGGCTACGGATCCTGGGGTGGCTGGGGGGGCGGGTGG
CCTCCGCAGATGGTCTCCCAGCCCCCACCGAACATGGCATCCCAGCAAATGGGAGAAAAC
GGCGGGCAATCCCAGATGAATACTTTGCCGAACGATATGCAACAGCAGCCACAACAGCCA
CTGCTGGGCAACAACGGCAACCAGATGCCGAGCCAGAGCCAACAGCAGCACCAGCCGACC
CACAACCTGGGACCGTTTCCGATGAAGCCGCTCAAGCAGGGCAAACATACTACGATATCT
CCGGAATTGTATGCGAAGGCGTCGGAGTGGACCTCTCACAAATCACCAGATGGTAGATTC
TATTATTACAACTCGGCAAGGAAGGAGAGCGTCTGGGAGAAGCCGAAGGTCCTCAAGGAA
TATGAAGATTTGGAATTGAAAATCGCAATAGAGAACGGGGAGAGAAAGATCGAGACAATC
GTAATAGACGATAAGCCGGACGAAGTAGATCTAATGGAAGCGGAGGAGGCCGCCAAGGCG
GAGATAGAACGGCAGGCGGCCGCTGAGCTGGCGGAGGAGAAGGCGAGAGAGGCGGCCGCC
GAGCAGGAGAGGCTAGAGAGGGAGAAAGCGGAGAAAGAGAAACAGGAGAAGGAAGCCAGC
CAGAAGGAGAAGGCGAAGCCGGACAAGCGTCTGCCTGTATCGACGATCGCCATATCCGGC
ACACCTTGGTGTGTGGTTTGGACTGGCGACGGTCGCGTGTTCTTCCACAACCCTACCGCG
TTGTCGTCCGTGTGGGAGCGGCCGGCTCAGCTGATCGGCCGAGCCGATGTCGATAAGGCT
GTCTCGACACCGCCGGCTATGCTCGCGGAAGCTATGCGTAAAGAGAACAAGGCGACAGTA
GGAACAACGGCGACCGGCGATGGTGGAAACGATTCAAAGTCTAATGGAGACCTTAAACGT
TCAGTCGATCCGTCCGAGTCCGATTCAGATGCTGAACCACCGAAGAAAGCGAAACCTGAT
GACAGTAAGAAGCTAGGTGGCACCATAGATGCTGGTAAGGAGGCCGCGATCGAAGCGGAA
GTGCGCGCGGCGCGGGAGCGCGGCGTCGTGCCGCACGAGCAGCGCCTCAAGAGTTTCCAG
CAGATGCTGCACGAGAAGGAGGTGTCCGCCTTCAGCACGTGGGAGAAGGAGCTGCACAAG
ATCGTCTTCGATCCTAGATACCTCATGCTCAACTCGAAGGAACGACGCCAGGTGTTCGAT
CAGTACGTAAGAGAACGCGCTGAAGAGGAGAGGAAAGAGAAGAAGAGCAGACTCCAGCAG
AAGAAGATCGCCTTCAAACATTTACTGGACGAAGCCAAACTGCATTCCAAGTCATCGTAT
ACGGAGTTCTCTGCTAAGCACGGGCGAGACGAACGCTTCAAGGCGATAGAGAAGCCACGC
GACAGGGAGAACTACTTCAACGAGCACATCGCCGACGTCAGGAAACGTGAGAAGGAGGAG
AAAGAGAAGAAGAGAGAACAGGCTAAAATGGACTTCATAGCACTGCTAAGGGAGAAAGCC
ATCGATAGGCATACGAGGTGGGTGGAAGTGAAAAAGAAGATTGACAGTGACCCTAGGTAC
AAAGCCGTCGAGGCTAGCAGTCTGAAAGAAGACTATTTTAGAGAGTATTGCAAGATGGTC
AAAGAGGGGAAGAAGAAAGATAAAGAAGGAAAAGAGAAAGATCGCAGTAAAAAGGAGAAA
AAGGACAAGGATCGCGACAAGGAGAGCAAACGGGAGAAGAAGAAGGAGAAAGCTGAGAAG
GAGACGCAGCCGGAGGCGACGCGTGAGGGTGCAGAGGTGACGGAGCCGACAGTAGAGGAA
ATCGCCGCCGCGAAGGAGAGAGAGGCACGGGCGCAGGCGTCGATCAAGGAGAGAGAAAGA
GAGGTGCAGCGAGCGCTCGCGACCAGCCTTAGAGACAGGGATAAGGAGCGGGAGTATCAT
AAAAGAGATGAAGCTGTCCAGCACTTCAACGCGCTACTGGCCGACCTGGTGAGGAATCCG
GACCTCGCGTGGCGCGATGCGAAGAAGCAACTGAAGAAGGACCATAGATACAGTTTGGCG
GAGTTGCTCAGCAAGGATGACAAGGAGCGATTGTTCAGTCAGCATACGTCCGCCCTCGGA
ACTAAACGGAGGGACAAACTGCGCGCTCTGCTTAACGACTTAGCCGTGAGCTGCACGTCT
CAGTGGCGCGACGTGAAGGAGCAACTCGGCCAGGACCCGGCAGCGCCGACGTACACCAGC
TCATCACAGATGGAACGCGAATTCCGCGAGTACCAACGCGACAAACAGAGCACAGCTAAG
ACAGCGCTGCGGCAACTGTTGCTAGAGACTAGGGCCATCAGCCACAAGACCTTCGCCTCG
GTGAAGGACAACGCTAACGCGATGCAGCAACTACACGACGGTCTGAAGCAAGACGCTAGG
TATTTAGCCTTAGATCATATAACCGAGGAACGGGATCAGATAATCATGAGTTACTTGGAG
GAGATGGAGAAGAAGGGTCCTCCGCCCCCTCCCACCGCCACCGAGCCCACGCGCCGCACG
AAGCAATGACAGTTACTACATAAGGAACGGGAGAAACCTCCAGACATGTCTGGAAAGGGT
TCGTTTATGGCCGGCGGCGTTCTTCGCTATGAAACTAAACATTGACTTAGAGTGTAATTT
TTAATGAAATGATAATGATAAAAATCTAGTTACTGGGAAAAAAAAAAA
(2748 bp)

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