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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24326_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_abstrakt_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006915 P apoptotic process
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0009653 P anatomical structure morphogenesis
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0030010 P establishment of cell polarity
GO:0046872 F metal ion binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:5.24 TPM:3.35
ORF EntryO_SariMSG11046_complete:A_SariMSG_c24326_g1_i1
Sequence
(Nucleotide)
TTTATCAATACGTCTCATGTTTTGAAGACAGTTTTTATTCCTTTTTTATATATTTATTCC
TATAAGAAATTAAAACAATGTCTGACAAACACAGTGAACCGCCGCCTCCTAAAAAACGAT
ACAGACGTAAAGAGAAATCTTCAGAATCAGAGGAAGATATTGATTCATACGAACCTTACA
TCCCTGTGAAAGAACGAAAGAAGCAGCAATTATTGAAGCTGGGTAGACTCGGTCAGCTTG
CAGCTGAGGCTGCAGCTGAGACTAAAAGCTCTAGCGAAAATGATCCTGATGATGAAACAT
CTCAAGAAGAATGGGGACGTAGATACAATATATCACTACTGGACCAACACAGTGAATTGA
AGAGGTTAGCAGAAGCAAGGGCGCTCTCTGCAGCTGAAAAGCAGGCGCGTGAAGAAGAAC
ATATACTAGAGAGCGTTGCACAGAGCAAAGCACTTATGGGAGTTGCTGAGTTAGCTAAAG
GAATCCAATATGAAGAACCTATAAAAACATCTTGGACGCCACCGCGGTGCATTCTCCACC
TGCCTGAAGAAAGACATGATCGGATACGAAGAGAATTACGAGTTCTTGTTGAAGGTGAAA
ATGTACCGCCACCAGTTCGAACATTCCAGCATATGAAGTTTCCCAAAGGTATTCTACGAG
GACTTGAAGCCAAGGGTATAAAGAAACCGACCCCTATTCAAGTCCAAGGTATACCGGCAG
TGCTCAGCGGTAGAGACATGATCGGTATTGCTTTCACTGGCTCGGGGAAGACTCTAGTCT
TCACGTTGCCCATAATCATGTTCTGTTTGGAGCAAGAGATCAAGATGCCTTTTATCAGGA
ACGAGGGTCCATACGGGCTGATCATTTGTCCCTCGCGAGAACTGGCGAAGCAAACCCATG
ACATAATCCAGCATTTCATCAAGCATCTCAAAATGACTGGCAGCCCCGAGATAAGAAGCT
GTTTGGCTATCGGAGGTGTTGCCGTGTCTGAATCTATGGAGGTGATACAGCGCGGTGTAC
ACATTATGGTCGCGACTCCTGGTCGGCTCATGGATATGTTGGACAAGAAAATGGTGAGAT
TGAACGTTTGCCGCTATCTCTGTATGGACGAGGCGGATCGTATGATTGATATGGGCTTTG
AAGAGGACGTCAGAACAATATTCTCATATTTCGCTGGACAGCGTCAGACTTTGCTGTTCA
GTGCCACTATGCCAAAGAAAATACAAAACTTTGCCAGGTCGGCGCTGGTCGCTCCGGTGA
CAGTGAACGTGGGTCGAGCTGGCGCCGCTTCCCTGAACGTCCGCCAGGAGTTGGAGGCGG
TCCAGGCGGAGGCCCGCACCGTCCACCTGCTCCACTGTCTCCAGAAGACTCCGCCCCCGG
CGCTGGTCTTCGCCGAGAGGAAACAAGACGTCGACGCGATACATGAATACCTACTCCTCA
AAGGCGTGGAAGCTGTGGCGATACACGGCGGTAAGGACCAGGAGGAGAGGTCTCGCGCCG
TGGAGGCTTTCCGGCGCGGGGAGAAGGACGTACTGGTCGCCACTGACGTCGCTAGTAAAG
GTCTGGACTTTGCGAACATCCAGCACGTGATCAACTACGACATGCCGGAGGATATCGAGA
ACTACGTGCACCGGATAGGGAGGACGGGTCGCGCGGGGGGCGAG
(1664 bp)

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