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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24265_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_206863_[Danaus_plexippus_plexippus]
Ontology
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000395 P mRNA 5'-splice site recognition
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:3.21 TPM:2.05
ORF EntryO_SariMSG10908_complete:A_SariMSG_c24265_g1_i2
Sequence
(Nucleotide)
GTGCTGCAACAGCCACCGGTGAAGCACCAACCGAAACCAGTGAAGAAGGCCCAACCGCCA
ACGTCACTCAAGTCTACGGGACTTAGTCTCATGAAGAATTATAACACTGACTCGGATAGT
GATGCCTCCGATTCCGACGGTGTATCATCGACGGAGAGCAAAATCAATATCGTTACACCG
CCTGAGGACGTACAGACGGTTGTCGACAAGATGGCGGCGTACGTGGCGCGTAATGGCGAC
GAGTTCGCAGATATCGTCCGGGCGAAGAACGATCCTAGGTTCACGTTTTTGGAACCGGAT
AATATATATTATCCGTACTACAGACGTCTGATGCAGGAGAAAAGAGGGATCACTGTCAAC
GGGAAGAAGAAAGTGGGAGATGACAGTGAGAAATGGAACGTTTCATTTTCAATTAAGAAA
TTAAAAGAACCCGAAACAATACTACCCAAGCCCGCTCTACCATATGAGACTAGCTCAGAT
GAAGATTTAGAGAAGCAAGTGGAGAAGCAAGATGAGAAAGAGATAGAGAAGGAAGAAGTG
AAAGAGACAGAGAAGGAACAGAACAAAGAGACAAAGACAATAGATAATTCTTCGGAGCAG
CAACAAGAGGAAAGTAAACCACAGCCGTTAGTGCAACAGACATATGATTTGAATAACATA
CCTCCAATTATAGTTTATAAAATGGAGGGCCAGTTGACAAAAGATTTACCTCTCATAAGA
GCCTTTGAACCGCCGATAAAAAGTGCACCAGTAACAAAGGCTCCAGAAGTAGCAGAGTCA
CCAAAACCAGAACCCGCACCTGTCGAACAAGAGAAACCACCACCAAAGTCAATTGATGTA
GTGATAGAGAAAACTCCTATACGTGAAGAGAGAAAAGAAGAAAAAATAAGAGACTCGAGC
CCGAGTCATAGGAGAGAGAAAACTAAACACAGAGATAAGAGAAAGGATTACACGTCTAAA
TCGGAAATTAGGGAACGGCGCGTTGACAGAACTCCGGAAAGAGAGAAGCGGAGGGAGAAG
GAGAGCGACAGAGAAAGGAAGAGAGCGAAGTATAGTAAAGAGGAGTTGGAGACGGAGATT
ATCTCGTTGGTGGATAATTCAGATGAGTTTATCGATTTGACTGGAGAACAATCGGATTCA
AGAGGTGAGGGTGATGTGGAGTCGAACCCTCGCAAGCAGAAGGACAGGAGGCGCCGCGCC
GCCGAGTTCCTGAAGAAGGTCGGTGTGGACCCAGCCGCAGCCACACTACCGACCACGTCT
CTCGCTAGCGCTATGGTCGATACGTTGGAATTACTTCGGAGGAAGAAAATGGAAGAAGAG
GAGAAACGTCGTAGACGCGATAAGAGAAGACATCGGGATAGACGAGAAGACGGTTATCAT
CGAAAGAGCAGAAGGAGAAGGTACAGGTCTTCAGACGACGAGGACGATGACAGTTCGAAG
AAGAAGAAGCGGAAGCGAGACAAAAAACACAGTTCCAAGAGCAGGAAGAAGAGGAGGAGA
GATGAAGACATTGACGAGGGGGTCGACGCGAACCCTCTGAACATAGACTTGACCAGCACA
CTGAAAGAGCTACGTACTCGTTCACCCACTAAGGACCTGGTCCTGCAGGACGTCGACCGG
AACTCCCAGCACAGCCTCAGGCAGGATTCCACCGACGAAGAGAACGGCAGGGAGAGTCCA
CGAGAGATGAGGAAGAGGGAGAAGAGAACAGATCGGGAGTACAGCGAGGGAGAGTGGTCT
AGTAACAGCGATGACGACTCTAAATCTTCCCGAGACATATAGTATTTATATGGACATTGT
TAAATTCAAAAACACGAAAAAAAAAAGATTTTCGTCTCTGATACGCAAGATTACATTATA
ATTTTACGTTTTACAAAATAGCGTCGGGTGATATGGGGTCTTCCATGTATTACGCGGGTG
CTATAGTGGTCCGAATGATGATTGCGTAAACAATAATTTACTAATTACGAGAAGAGAAGG
AGGTGGGGAGGGTCAAAAAAGACTTGATAACCTTGATAACGTACCACTGGAACGAGCCCC
(2040 bp)

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