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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24124_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:16.49 TPM:10.52
ORF EntryO_SariMSG10697_complete:A_SariMSG_c24124_g1_i5
Sequence
(Nucleotide)
CGATCTCGGGCGAGTGCGCGTTTGCGCCGGCAGTCGGCATACCGCCCGGGCGGGCGCCAC
ACGACCGGGATCTGCGCGAGCGACGTGCGGTGACGCGAACTAAAATTATTTCAGTGAAAT
AAACAAGCACCCGTCGACCGCTCTACCATGCGAGCGCAAGATTCTGTGAATTAAACACGA
GTTTAGTGAACGAGTCTCGAGTGCAGAGCACAACGACGGCAGTCGCACAACGAGAGAGCG
ATTAGGGTTCATAGAACCCCCTACGACGAAACGATTCGAGTCTGGTGCTGGAGAAGCGTG
CGTAAACTTAAATCAGCATACAAAAATACAATACACATTTCTTAACACAGAGAAAACAAT
AAACGGAAAAATATCGCTAAATGCTGTAGTGCATTAACCAAAGACAAATATTTTGATAAT
CGAACGCCATTGGGAAACCGCGTACGACGGCTGTCACATAACAAAACGCGGGAAATTTCG
TGTGCGTTCAATTACCTAGTATATTGAAAAGTTTAATTGTGGCAAATCGGAAAAAAATCG
ACAAGATGCAGACACAAATTGGAGTCGGTAATGAGCTGCAGCGGAGCTACAGAATTCAAG
ATTTCGCGACGCCTGGCGTCATCATGAGAGAACGAAGTTTCGTACGACCACAGTCTCATC
ACAACATGCATCATAACCAGTTTTCAAACAATGCCAAACGTCGAAGCATGATCCTTACGA
ATTCTAAAGGGAAACCCACTCTCGAAATTTATAGACCGCCTGGTGTCCGAACAGACGGGG
TTGCTACGGTGACGGCGGGCGGCACAATGGTCACCACGAGCAACTCATCGACATCTACGA
ACAAGCTCAACGTGCATGCTAAGGAATTCACCATGGCCAAGCCTGTCGACCATAACAACA
GGCCGGCGATGGGTATGGGATATGCGAGCGTCGGGCTGCAGCACTCGCGGTCCGCAGTGC
TGCACGCGCAAGTGCCGCCGCACTACCGGCCCGTATTGCCGCCCCACGCTCTACTGAACA
GCACATCCAGCGGGAACGTGCCTCACGCACAGGTCGGGCCGCGCGTTCACTTCAAACTGC
AGCCGCAGAATTCTGTCATACACGAGAAGAAGAGGTCCCCTCCTTCGTCCCTGACTAATG
GTAATGGGAAGGGAGTCCGCCCTCAGTCGTTTACTCCGGGGTTAAAGAGGTCTAAATCGC
TGACCTCTGCGGATGCGTTGGCCAGCGGTATGGCTGCGCTGGGTCTCGCCGCCGACGCGG
GCGACCTCGGCACGTTCCCGCCTGATATTCAAGAGTGCATCGATAAAGCACTTGAAGATC
CGAACGCTGTGTGCGCTCGTACGCTGATGGACGCGGTGGGGCACCTCGTGTCGCGCGCCG
TCGAGTCGCCGCGGTACGCGCTGCCGGCCGCGCGGCGCTGCATCGCCGTCGTCGAGCGCG
AGCAGACCGAGACCTTCCTCGAGTCCTTGCTCAACACGTGCCAGCAGTGGTACCACGACA
GGGAGAAGTTGTTGGGGACAATGGTGGGCGGCGGTCGGCCGCGGCTGATGGCGTTCCTCT
CGTTCCTGTTGGAGATGTACTGTCAGTTGCGCAGACGCACGATACAGCGCCGCGGCGCGA
GCGCGCAGCCCGGGCAGGTCCTGCTCACGCTCATCTGCAAGTGCTGCGAGGACTGCATCC
GCCAACCCGTGCCCTCCGCTAGCGATACGGAGAATCTGTTCTTCGTGCTTACGTACATCG
GTCGAGATCTCGAGGCTCAGTTGCCGGGAGACCTCGAGCGGCTCCTGACGGCTGTCCGCG
ACGCATTCCTTAACACCGCCGCCGCGCCCTCCATCCGCAGGACTCTGCTCCAGCTCATAG
AGCTACACGCGTCCCGCTGGCAGCTACCCGGCTGTGCGGTACTCTATTACTATCCCTCAT
CGAAATAATGTAAGGTTTGATCGATATCGATTTGATCGACACTGGAACAATATCGATACT
GTGATTAATTGTTAAATACTTTTGAAATATCAGAAGATGTCAAAACTTACGCTGTATGGC
GCCAAAAGACTTTGGGAAGTCGACGTTGCTGTTCCCGTGTTATTGATATATCGATTCTTT
TCGAATATCGTTCATCCCTACTATACGATGCAGCTATAATATCATCTACATATGCTAAGT
CTTAATGTTAAGTCGTATCTTATGACTGACTTTGATTCATTATGGGGTCTTTATAATTAT
TTAACTTAATAATAGGTAAATGTAAAGTACATTATACTTATTTTTTTAGATTAACAAACA
AAAGGGTAGCTTTTAGTAACCAATCGGGATATGATGGTGTACTCACGTATTAAATCTAAT
TAGGATTTAAACTTATGTTCCTATTATATCAAAATCACTGATTCTTAGTTTTCACCGAAA
AGAGGGTGTTTAATATCAACATTAGAGTTTTATAACACAGAGGTTACAAAAAGCATTTGG
TTTGGTTTTCTTTCTAAGTTTCAGTACTATTGCGTTAGTCCTATTTATGTTTTGTTGGCT
CGAGGCTGCCATAAGCTCCATAATAGTGTGCCTTTATAAAATATTTTAATAGACTATTCA
TGGTTTTTAACATATATTAAAAAATACAGCAAATATGAAAGCCTGAAATGGTTAGTATAT
ATTTATTTGTAAGGTTTTAATCATTTATAGCTTAAGGTATAGATTATATACAGTAGACAT
AGAGGATTGATATACGCCTTGAAAGTATTAAAAAAAGTACGTGTAAAAAAATAATTAGTT
TTGGACAAATGTATGGTGTACATTACTGTACGACTCTCGCATAGTACATCGTGCATTGTA
TCCTTTGTCTATAATTTATTATAAAAAATCTAACTTTAGATGTTTTGCCGACTCTGTCTC
TAGCTTTGTAGCACCTACTGCTTCGTGTATTGTTTGCCTGCAAATAATTGTTGTATTTAG
TTAAGTTCCATTGCACTAAATAATGTAAACGTTGATGATGCACTATGGTATTTAGTTGTA
TTTTTTTGTCTCTTTATCAAATCATTGCAAAAAAATTACAGAAATGAATTTGACTGAATA
TTTTTTTTTATAAATGAGCTGTTTTTCAATGTTTTACGCTTGTGATATTATAAATTTTAA
GTTAAATAATCTCGATGTCTTTTCTCTGTCCCTAACCAAAGACTGTACTGATGGGAGATT
CATTTTAATTTTATTAAAAAAAAAAAGAATTAATATTGTTGAAGCTGGACCAAATTTTCT
TCGTTTCGAGGTTTTTCTTTATGGGTGTGTTTCATTAGCATGATGTAATAAGTTCGTTAT
TTACTTAGGCTATTCGACTCAATGCTTTGTCAAATGGATAGCTTAAGTTTTGTTAGTTGG
ATATTAAAGGAGAAAAAGTTAAAAAGACCATGAACTTTTTGTTACTGTGCATTCGTAGTA
ATTTAAGGTAATGATAATGTTATGTTTGTAGAAAAAAAATGAAAAAAAAAAATGGTGCTA
ACTAAAAAAAAGTATTGGTGTATTGTATAATATTCTCATAGATTACGGGCAATAACAATA
TTCTCGTTACCGCTATAAATTTTTTTTACGATTAAAACCATTTTAAAGGAATTATTATAA
CCAATAAAACTCTATAAAAA
(3620 bp)

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