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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24124_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:2.99 TPM:1.91
ORF EntryO_SariMSG10694_complete:A_SariMSG_c24124_g1_i2
Sequence
(Nucleotide)
CGATCTCGGGCGAGTGCGCGTTTGCGCCGGCAGTCGGCATACCGCCCGGGCGGGCGCCAC
ACGACCGGGATCTGCGCGAGCGACGTGCGGTGACGCGAACTAAAATTATTTCAGTGAAAT
AAACAAGCACCCGTCGACCGCTCTACCATGCGAGCGCAAGATTCTGTGAATTAAACACGA
GTTTAGTGAACGAGTCTCGAGTGCAGAGCACAACGACGGCAGTCGCACAACGAGAGAGCG
ATTAGGGTTCATAGAACCCCCTACGACGAAACGATTCGAGTCTGGTGCTGGAGAAGCGGT
ATTCTCAGCCACCCCTCGAAATATTGTAAACAATCGCTCGTGCGTAAACTTAAATCAGCA
TACAAAAATACAATACACATTTCTTAACACAGAGAAAACAATAAACGGAAAAATATCGCT
AAATGCTGTAGTGCATTAACCAAAGACAAATATTTTGATAATCGAACGCCATTGGGAAAC
CGCGTACGACGGCTGTCACATAACAAAACGCGGGAAATTTCGTGTGCGTTCAATTACCTA
GTATATTGAAAAGTTTAATTGTGGCAAATCGGAAAAAAATCGACAAGATGCAGACACAAA
TTGGAGTCGGTAATGAGCTGCAGCGGAGCTACAGAATTCAAGATTTCGCGACGCCTGGCG
TCATCATGAGAGAACGAAGTTTCGTACGACCACAGTCTCATCACAACATGCATCATAACC
AGTTTTCAAACAATGCCAAACGTCGAAGCATGATCCTTACGAATTCTAAAGGGAAACCCA
CTCTCGAAATTTATAGACCGCCTGGTGTCCGAACAGACGGGGTTGCTACGGTGACGGCGG
GCGGCACAATGGTCACCACGAGCAACTCATCGACATCTACGAACAAGCTCAACGTGCATG
CTAAGGAATTCACCATGGCCAAGCCTGTCGACCATAACAACAGGCCGGCGATGGGTATGG
GATATGCGAGCGTCGGGCTGCAGCACTCGCGGTCCGCAGTGCTGCACGCGCAAGTGCCGC
CGCACTACCGGCCCGTATTGCCGCCCCACGCTCTACTGAACAGCACATCCAGCGGGAACG
TGCCTCACGCACAGGTCGGGCCGCGCGTTCACTTCAAACTGCAGCCGCAGAATTCTGTCA
TACACGAGAAGAAGAGGTCCCCTCCTTCGTCCCTGACTAATGGTAATGGGAAGGGAGTCC
GCCCTCAGTCGTTTACTCCGGGGTTAAAGAGGTCTAAATCGCTGACCTCTGCGGATGCGT
TGGCCAGCGGTATGGCTGCGCTGGGTCTCGCCGCCGACGCGGGCGACCTCGGCACGTTCC
CGCCTGATATTCAAGAGTGCATCGATAAAGCACTTGAAGATCCGAACGCTGTGTGCGCTC
GTACGCTGATGGACGCGGTGGGGCACCTCGTGTCGCGCGCCGTCGAGTCGCCGCGGTACG
CGCTGCCGGCCGCGCGGCGCTGCATCGCCGTCGTCGAGCGCGAGCAGACCGAGACCTTCC
TCGAGTCCTTGCTCAACACGTGCCAGCAGTGGTACCACGACAGGGAGAAGTTGTTGGGGA
CAATGGTGGGCGGCGGTCGGCCGCGGCTGATGGCGTTCCTCTCGTTCCTGTTGGAGATGT
ACTGTCAGTTGCGCAGACGCACGATACAGCGCCGCGGCGCGAGCGCGCAGCCCGGGCAGG
TCCTGCTCACGCTCATCTGCAAGTGCTGCGAGGACTGCATCCGCCAACCCGTGCCCTCCG
CTAGCGATACGGAGAATCTGTTCTTCGTGCTTACGTACATCGGTCGAGATCTCGAGGCTC
AGTTGCCGGGAGACCTCGAGCGGCTCCTGACGGCTGTCCGCGACGCATTCCTTAACACCG
CCGCCGCGCCCTCCATCCGCAGGACTCTGCTCCAGCTCATAGAGCTACACGCGTCCCGCT
GGCAGCTACCCGGCTGTGCGGTACTCTATTACTATCCCTCATCGAAATAATGTAAGGTTT
GATCGATATCGATTTGATCGACACTGGAACAATATCGATACTGTGATTAATTGTTAAATA
CTTTTGAAATATCAGAAGATGTCAAAACTTACGCTGTATGGCGCCAAAAGACTTTGGGAA
GTCGACGTTGCTGTTCCCGTGTTATTGATATATCGATTCTTTTCGAATATCGTTCATCCC
TACTATACGATGCAGCTATAATATCATCTACATATGCTAAGTCTTAATGTTAAGTCGTAT
CTTATGACTGACTTTGATTCATTATGGGGTCTTTATAATTATTTAACTTAATAATAGGTA
AATGTAAAGTACATTATACTTATTTTTTTAGATTAACAAACAAAAGGGTAGCTTTTAGTA
ACCAATCGGGATATGATGGTGTACTCACGTATTAAATCTAATTAGGATTTAAACTTATGT
TCCTATTATATCAAAATCACTGATTCTTAGTTTTCACCGAAAAGAGGGTGTTTAATATCA
ACATTAGAGTTTTATAACACAGAGGTTACAAAAAGCATTTGGTTTGGTTTTCTTTCTAAG
TTTCAGTACTATTGCGTTAGTCCTATTTATGTTTTGTTGGCTCGAGGCTGCCATAAGCTC
CATAATAGTGTGCCTTTATAAAATATTTTAATAGACTATTCATGGTTTTTAACATATATT
AAAAAATACAGCAAATATGAAAGCCTGAAATGGTTAGTATATATTTATTTGTAAGGTTTT
AATCATTTATAGCTTAAGGTATAGATTATATACAGTAGACATAGAGGATTGATATACGCC
TTGAAAGTATTAAAAAAAGTACGTGTAAAAAAATAATTAGTTTTGGACAAATGTATGGTG
TACATTACTGTACGACTCTCGCATAGTACATCGTGCATTGTATCCTTTGTCTATAATTTA
TTATAAAAAATCTAACTTTAGATGTTTTGCCGACTCTGTCTCTAGCTTTGTAGCACCTAC
TGCTTCGTGTATTGTTTGCCTGCAAATAATTGTTGTATTTAGTTAAGTTCCATTGCACTA
AATAATGTAAACGTTGATGATGCACTATGGTATTTAGTTGTATTTTTTTGTCTCTTTATC
AAATCATTGCAAAAAAATTACAGAAATGAATTTGACTGAATATTTTTTTTTATAAATGAG
CTGTTTTTCAATGTTTTACGCTTGTGATATTATAAATTTTAAGTTAAATAATCTCGATGT
CTTTTCTCTGTCCCTAACCAAAGACTGTACTGATGGGAGATTCATTTTAATTTTATTAAA
AAAAAAAAGAATTAATATTGTTGAAGCTGGACCAAATTTTCTTCGTTTCGAGGTTTTTCT
TTATGGGTGTGTTTCATTAGCATGATGTAATAAGTTCGTTATTTACTTAGGCTATTCGAC
TCAATGCTTTGTCAAATGGATAGCTTAAGTTTTGTTAGTTGGATATTAAAGGAGAAAAAG
TTAAAAAGACCATGAACTTTTTGTTACTGTGCATTCGTAGTAATTTAAGGTAATGATAAT
GTTATGTTTGTAGAAAAAAAATGAAAAAAAAAAATGGTGCTAACTAAAAAAAAGTATTGG
TGTATTGTATAATATTCTCATAGATTACGGGCAATAACAATATTCTCGTTACCGCTATAA
ATTTTTTTTACGATTAAAACCATTTTAAAGGAATTATTATAACCAATAAAACTCTATAAA
AA
(3662 bp)

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