SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24099_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RNF180-like_[Bombyx_mori]
Ontology
GO:0000027 P ribosomal large subunit assembly
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0007126 P meiotic cell cycle
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019933 P cAMP-mediated signaling
GO:0030476 P ascospore wall assembly
GO:0030687 C preribosome, large subunit precursor
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:2000786 P positive regulation of autophagosome assembly
Transcript
Level		FPKM:9.25 TPM:5.90
ORF EntryO_SariMSG10649_complete:A_SariMSG_c24099_g1_i1
Sequence
(Nucleotide)
ACACAGTTTGCCATTAGCTAAGAAGAAGAAATGGAACAAATAAAATAACCTGCAAATTGT
TTTCATGACAATAAATGAATAAACAAATTATGATATGGACATGAATTCTTACAAAATTGG
TGTCATTAAGTGCCACAAATGTCGATGTATACTATTAGATGATTTATCTCTAATTGCTAA
TGGTTTAACAACATGTGGTTGCGAAAGTTATAACATACATAAATTTGTTTATATACACGA
AGAAAGACTACCTTGCTGGATGAAAATCAGAATAGAAAATGATCAGTGGACTAAAGGGAG
GTTCAATTGTGAGAAATGTGGTTGTAGAGTTGGAGCCTTTGATTATATATCAGGAAGAAA
GTGTGATTGTGGAAAGACAGTTTTACCGCCTGTACATTTTATATCAAGTCAAATAGATAG
ACCGATGTTAATGGATAACATCAACAATTAACAGAAAATGAAATCTAAATAAAACTAATT
AAAAACATCCTCGTCTAATATCCTTATTTATAAAACAGGTTATTAGTTTTAATGTCTTAA
CTTTTTAACTTTTAACATTTAGATTTAAATATATTTTTGTAAAAAGATCTCATTCCTGG
(599 bp)

- SilkBase 1999-2023 -