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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24040_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		metal-response_element-binding_transcription_factor_2_isoform_X2_[Helicoverpa_armigera]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007419 P ventral cord development
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:2.74 TPM:1.75
ORF EntryO_SariMSG10550_5prime_partial:A_SariMSG_c24040_g1_i3
Sequence
(Nucleotide)
AACCGGTCTCCACCTCAATCGTCACCGGTCTCCACCTCAACCGTTAGAAAGTCTGATGAC
GATACCAAAGCCGATGACGATTTAGACAAGATTACAGTTTTAAGTGAAACAACGAAAATC
GAATGCAAAACGATCGTTAGTGATATACCCCCGTCCGAGGATGTGCCATCGACTTTGCAT
CCGTGCTCTGTGAAACTAGATAAAATACCCAAAGACAATATCGACGTTAGTAATATAAAG
AGTGATTTGAATAACATAACAACTGTTCATATCAACAACAACAGCCACACGACCCGTATA
GCGACTATGAATTTGGAAGTATCGAAATTATCAACGAAGAACATCATAGAACATTCCAAA
ATAATGTCGCTACAGCGTATGGAGAGCGTACCGGCTTATAACGGCTTCACTCATAACGAT
GTGGAATCGTCGGGCGATGAGACGTCGAGTAGAGGAACCCTGGACGCGATAATACCGCCG
CTGAAAGACTTCCAAGGGAAAAACAACCCGTTTCTAATGCAGCAGAACACATCTTACCCG
CCATCGAAGAAATCCTTTTCACTGTCGAACGTTTATAATAAACAAAACGGGAAACTGGGT
AGTTATCCGTCGAGGTTTTCGTTGCCGGTTCAAATGAACCCCCTGATGGGGCCTCTGGTG
AGACCGTTGAAGAGGAAGCTCAGCGAGAAGGACATCGTGATAGGACCGAACGGTGAAGTG
AAACGGAGGAAGTATCGACGGCCGCGGAAGTATTTACAATTACAGCTGAACAAATCGTGC
CCGCTACCAGATGACAGCAAATCGGTTCAAACGACACCGGAAACCGTTGAACCGATCGCT
GCGAGCACCCTCCTCCCACCGCAGAGCAGCGTTCACATTAACAACGGGAAAATACACGGC
AGGAGACTTAGACAGAGGCAGGAGAAGAACTATTACGAGAATGCACGTCGAAGTACAAAT
AATAATAGTAGTAATAATACTAGTAGTAGTAGTAGTAATAGTAGTAGCAATAATAGTGTA
AAGAGTCTTCAGTTAAGCCCACACAAAACGAACAGTAGTGGTGTCGATGTGAACGCGGAA
CAACTGTCCGCCTTGAAGTCCAGTATACAGTCGTATTTCCGCGTGGGGCAGACGTTCCAC
GTGCTGGCGAGACGGCACGCGCCCGGAGCGCAACCCGCTTACCTCATACACTGGGACACG
AAGGGTTCATAGTTTTAATACACACAGATCGGAAGAGCGTCG
(1242 bp)

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