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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24038_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PDZ_and_LIM_domain_protein_3_isoform_X6_[Bombyx_mori]
Ontology
GO:0001666 P response to hypoxia
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:28.79 TPM:18.37
ORF EntryO_SariMSG10546_complete:A_SariMSG_c24038_g1_i2
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTCGTATTACCGTCGCGGTAGCACGGTGTATCATAGTGCATCGCG
TAGTGCAACGCACACCTGTCACCCCGCGCAATGGGCCGGCTGCATACGTTCGTGGTGACG
CTGCGGCGCGACTCCCGCGATGTCAACTGGGGTCTGCGGCTTGTCGGAGGCTCGGACCTA
GCCACTCCTCTCATCGTCACCAGGGTATTGCCAGGCACACCCGCCGGCAAGGACCTAGTA
CGTGGTGACATTGTTGCGAAGATTGACGACTACGACGCACGAGATTTGAGACACGAGGAC
GCACAAAACCTCTTCAAGAATGCACCAAATCAAATCAAGCTAGTTGTACAAAGGGACGTG
GATCGCGAGGGCCCACGTAGCACAGCAATGGCGCCACGTTCTCCCATATCCAACGCATCT
GCTGCACCATACAGTACACCGAGTCCTCTGCCAAGCAGCGGATGGTGTGGACCGGAGTCC
TTACCACGCAGCACGCCTGTGCCTCCAGCACACTTCACACCACTATATGAAAGCGAGTAC
CGCACATTACTGCTGTCCCCCGCGTCCGCTCGCACCGACGACACACTCGACGAGTCTATC
CAGTCTCAGCCTTATCGCACGACACCTTTGGTGCTACCAGGAGCGAAGGTCCGCCGCGAA
CCTGGCCCCACTGAGAGCTATCTGCGCCACCACCCAAACCCAGCCATGAGAGCACCACCC
AACCACGATTATCGCGACACATTAATGAAGCAAAAGGTGGTGCACAAACAGTTCAACTCA
CCAATCAATCTATATTCGGACCAAAACATCGTCAACTCGATCAGACAACAAACGTCTCCT
TTGCCTAACAAACCCGGCGAGGCCTACGACCCCGCCAAGTCGGAAACGTTCCGCGCCCTG
CACGAGGATGAACTCGCCGACTCAGCACAAGAGGTGCCCACGCCCGTACAACCCAAGCTC
TTCCAGGCACCACTCACCAAGAAGCCGGTGCCTACACCGAAACAAACGAAGCAAACCGAT
GCGACCTCTATAGGAAAACAAACGACCTTCGTAAACTCATTACACGAAGAGCATATCCAA
CAGTCGAATTCATTCAAGCGACTCATGTACAACGTACTCGGCGATACTGAGTTTTAGTGT
GACGAGAGAAACGCGCATTCACTACATGTCTATGAATACCTTATTATTTGTTTCATTATA
AATTACTCCAAACCTAATTAAAAATAATAATATATATGCTATGAAAAAAATATCAAAAAG
TTTCATATGTCCACTTTTTTATGTTATCTCATTTTATCGACTGATTCGGGGTGGGTTTTA
GTTAAGCGGTTAGTTGATTGTGATGAATTTTAGACATGTTGAAAATTATATTGACTTACT
TATTTAGCAATGCATAAGAAGAGACTAACAAAAACTAATTAATTTAATCTATATATATAT
ATATAATAGGGTGCTATTATTATACAATAAATAATATCGTTCGCAGTGTGTTATAAATTA
TTTTTCGGTCGGTTTATCGTTCTAATACTCGAGTATTAGTAATATAATTTATAATTATTT
ACAATAAGTAGAGATTATTTAACTATAATTAATAAGTGTTGATTTTCTGTTTATACAGAA
ATATAATTGTTTATATACATTGAGTGTACCGTCTAGTCATAGCGGCCAGAGCTCGGGCCC
TAAGATCGGAAGAGCGT
(1697 bp)

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