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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c23978_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_28S_ribosomal_protein_S11,_mitochondrial_[Papilio_machaon]
Ontology
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0044822 F RNA binding
GO:0048027 F mRNA 5'-UTR binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:13.48 TPM:8.60
ORF EntryO_SariMSG10443_complete:A_SariMSG_c23978_g1_i1
Sequence
(Nucleotide)
ATGTCAACTGCAGAGATGAATAAGTTAACTGTTTTAAGGTTATAACCGTAAATAATAAAT
ATCAGGAAAGGAGTGTTGCATTATTTGTCTCTGGGAAGGAGTATCATACATTCGAACAAA
ATGCTTAATGCAATCAGAAGCTCTGTACGAGCCTCAGTGACGAGTGTAGTACGTTTCATT
CAAACAACTGCTCCGCAATCCACTGAGAGATTCGATCACAAACGTATTCCAGCGGACGAC
GAAGGTGTTCAAGGCGAGAAAATAGTTGATTTAGACGCTGTTCTTAAAGCAAAGCGAAAC
ATATTCCCAACTTTAGAATCAGATTATCAACTTTATAATGGTATACCATATAAGGACTTA
CCAATATGCAATATCCGTGTTAGCCACAATAATACTATTTTCACCATTACTGATTCTGCT
GGCAAAGTAAGACTTATAAGATCCTGTGGGATTGAAGGTTTTAAGAACACTAAAAAGGGT
ACAAATATAGCAGCACAAACTACTGCAATTAGCATAGCCACTAAAGCTATAGACAAAGGT
TTCAAAACTGTAAGAGTGAGAGTTCAAGGTTTGGGGCCTGGTCGTTTGGCTGCTGTAAAA
GGTCTGCAAATGGGTGGCCTAGATATCATATCAGTTACAGACAGCACGCATGTATCATGG
AACCCACCAAGAGCAAGAAAAGCAAGACGGCTTTAAATTGATTTATTATTCAAAGTACAA
TGTTGTATATTTGTACAATTTTATATTAAGTCTTAGCAGTAAATATTTACAAATAATAAA
ATATTAGTATACATTTTAGAAACCATATTTTGATTGAGTTTGTCTCTTTGACATTCTGTT
ATTGGCAGATCGGAAGAGCGTCG
(863 bp)

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