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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c23914_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_motif_protein,_X-linked_2_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000384 F first spliceosomal transesterification activity
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005686 C U2 snRNP
GO:0006406 P mRNA export from nucleus
GO:0044822 F RNA binding
GO:0070274 C RES complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.09 TPM:3.89
ORF EntryO_SariMSG10383_complete:A_SariMSG_c23914_g1_i2
Sequence
(Nucleotide)
ATTTTTGACAAACCTGCAAAGAAACTAGAAAGATTGTTTGTAATTGTCAATTTTTAACCA
ATCACTAATTGGCGGTATAATTACTGTTATAATTTATAAGCTAATAATTGTTTACAAATC
TTCAACATGAATCCTATGACGAATATGAAAAATGTTTTGAAACTGAGCGAAAGAGAACTG
ACAAACAATTCAAAAAGCTCTTGGCATGATCAATATAGAGACAGTGCATGGATATTTGTT
GGAGGATTACCTTATGATCTTACCGAAGGAGATGTCATTTGTGTGTTTTCACAGTATGGT
GAAATAGTAAATATAAACATGGTAAGGGATAAAGCAACTGGTAAGCCAAGAGGATTTGTA
TTTATTTGCTATGAAGATCAACGCTCTACTATACTTGCTGTTGATAATTTAAATGGAATC
AAAATCCTAGGTCGTGTTTTGCGGGTTGACCATTGTGAACAGTATAAAGCTCCAAATGCA
GACACAAGTAAGATTGATGAAGAAACAGCGAAAATACGAATGGATGGATGTGCTCCTGTT
ATACCGCAGCCAGAACCAGAAATTAAAAAGGAAAAAGGAGTAAAAGAAGGTAAGGTGAAG
AAAAAGAAAAACAAAGAAAAGAAAAGCAAGAAGAAAAAGAAGAAAAGTAAAAACTCTGAT
GTTGATTCAGATTCTAGTGAACATTGATTAGAGAATTATTTTTTATTTTGAAGTTTCTTA
TACAATGACACATGGATACAGAAACATTTAATACATGAATAATTAAAATA
(770 bp)

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