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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c23903_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_25S_rRNA_(cytosine-C(5))-methyltransferase_nop2_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
Transcript
Level		FPKM:21.77 TPM:13.89
ORF EntryO_SariMSG10366_3prime_partial:A_SariMSG_c23903_g1_i1
Sequence
(Nucleotide)
ACCAAATGAAAGTAGCACGTGTGTAGAAGAAGCGTGTAAAGTTTTTTATATGTTTAAAGG
TTTGGCGTACTATACGCTATAAATAGTTACTTATATAGAAATAACATATTATACATCTAC
AATGGGTAGGAAAGCTAAATTTGATGAGACAAAGAAAGTAAAAAAAGGGCCCGGTCGAAA
AGCTCGGAAACAGCCTGCTCCAGTGTTTAAGAAAGAACTTTTGGATGATGAAACTCAGAA
TAAAAAGTTAACACACAGACAGAAACAGAGGGCCGCTAAGCGAGCAAAGAAGAAAACAGA
ACTCCTAGAAAAGAAGAAAGCACTGAAACAGGCGAAAAAGACTGTTGCAAAACAGAAAGA
AGTTACAATTACTGAAGATGATGTGAGTGAATTAGAAGAAGAAAATGTTAAAGGATTTAC
TGATGATAACAAAGAATGGTTGAAACCTAAACAAAAAGCTAAACCTAAGCAAAAAGAAGA
AAAACCTGAGAGTTCTGATGCTGAGTCTGGTGATGAATCAGATAAAGAACAGGATTCAAA
TGAAGAAGAAGATATTGAAGAGAAACTTGGATCCGGTAAAGAAAAATATAAGGTTGGAAC
ACTTGATGATTTATTCCAAGATTCTGATCAGGAAAATGGTGAAGTTTCTTCAGAAGATGA
AGAGGCTGAAAATGCAGGAAAAGTGGCCTATGATTCTGACTCTAGTGATGGAAAAGACAG
TAGTCGAACTGATGATGATAATGATGATGACATGTTACCAATAGAAAAAGCTAACATAAA
GTTGAAAAAGAAAAAAATACTAGAAAAAAAACTTGCCGATGAGGAAATGCAGTTGAATAT
ATCGAAACAAGATGTTTTTGCTTTTCCATCAGAAGAAGAATTGCAGAATCCTACGAGTCT
TCAAGATGTACATCAAAGAATTAAAGATGTTGTCACAGTTTTATCGAACTTCAGCAGTTT
AAAAGAAGAAGGAAGATCTAGATGTGAATATACTGATTTACTACTCAAAGACCTGTGCAC
TTATTACAGTTATAATGAGTTTTTAATGGAAGTTCTTATGCAGATATTCCCAGTTGAAGA
GTTAATAGAATTTCTAGAGGCGAGTGAAGTGGCAAGGCCAGTTACTATACGAACTAATAG
CCTTAAAACTAGAAGGCGTGATTTAGCTCAAGCTCTTATTAATAGGGGTGTGAATTTAGA
TCCAGTTGGCAAATGGAGTAAAGTTGGACTTGTAGTATATAGTTCAACAGTACCAATAGG
TGCTACACCTGAATATTTGGCAGGTCATTATATTTTGCAAGGAGCTTCAAGTTTTTTACC
TGTTATGGCTTTAGCACCTCAGGAAAATGAAAGAATATTGGATATGTGTGCTGCTCCGGG
TGGTAAAGCATCACATATCGCTGCAATTATGAAAAATACGGGAGCTTTGTTTGCAAACGA
TGCAAATAAAGAAAGGACAAAGGCTATCGTGGGTAACTTCCACAGGTTGGGTGTTGTTAA
CACGGTAATATGTAATTATGATGGCAGACAATTCCCAGATGTTATTAAAGGTTTTGACAG
GGTTTTATTGGATGCTCCTTGCACTGGAACCGGTGTTATAGCAAAAGATCCTAGTGTAAA
GACTACGAAAGATCAAAAAGATATACAGAGATGCTTTAATCTGCAGAGGCAACTTCTTCT
GGCGGCAATAGATTGCTGTAATGCAAAATCAAGTACAGGAAGCTATATAGTGTATTCCAC
ATGTTCTATACTACCGGAGGAGAATGAGTGGGTAGTCAATTATGCATTAAAGAGGCGGAA
TGTGAAGCTAGTTCCAACCGGTTTAGACTTTGGTACTGAAGGGTTTGTGAAATACAGACA
TCACAGATTCCATCCATCATTGAAATTGACAAGAAGATTTTATCCTCATACTCATAATAT
GGATGGTTTCTTTGTAGCGAAATTAAAGAAATTTTCTAATGTTATCCCTGAACCTGTAAA
AGATGATGACGATGAAGAAATTGAAGGTAAACCATCTGATAAAGTAGATGAGAATACTGA
TGACAAATCAGATGATAAAACTGAATTGGAAGCTGTGAAAAAAAACAAACCAGTAAAAAG
GCCAGCAGAATCTTCTATTGAAGCGGGTTCAAAACTACCGAAAAAGACTAAAGTTGACAT
TGGGAAAAGCTCTGCTAAAACTCAGCCTCAAGTTAAAAGTGATAATAAAAAGAAGAAAAG
AAATCGCAAAAAGAAGAAAGGTAATGTGGTCAATAATGATAGTGATCCAACTAAAGTAAA
TAATGTAACAGTAACAAATAGTAATATGAAAGAGGCAAAGGCTCATCCAGACACTTCTCA
AAAGACTAATAATAAAGATTCTACTACATTGCCAAAACGAAATGCAAATAAAAATAGTGT
TAAGGAAAATAAAGGCTCAGTCAAAAATATGCAGAAGAAAAATGAAAACGTTGGCAGATC
GGAAGAGCGTCGTG
(2474 bp)

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