SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c23888_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		WD_repeat_and_FYVE_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
Ontology
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
Transcript
Level		FPKM:2.64 TPM:1.69
ORF EntryO_SariMSG10340_complete:A_SariMSG_c23888_g1_i2
Sequence
(Nucleotide)
CGGCTCGCGTCTCGGACCAAGGTGAAGAAAGAGGACTCTGCGAAGCTGCGTCCGGGTCCT
CCGCGAGATCACGCGCTTGCGTATATACAGGATCACGTCCAGCTCGTAAGACAGGCGTGG
TGCAATCAGCGAGCAAGTGCGGCGAACACGTTGGCGCACACGACGCGGTACGTTCAGGCC
GAGTGGACGGGCGCCTGGCGCGAACTGACACGCGAGCGAGCCCTCTGGGGACCTCCCAGG
GCCTCACCGTTAGACAAGTGGGCCCTCGACTCTACGGAAGGGCCTTGCCGCATGAGAAAA
ATGCTTCGGAGAAATCATCTCTTTTACCTCCATTACCCGTATTCACCGCAACTCGACAAC
CCTGACAATAAACAATTGAAATACAAAGTGGCTCAGAGTTTGGATAGTAAGGAGTATTAT
CGGGTGTATCAACAATGGCGTACCGCTGGTGCTATGGGCGAGGCCGAAATAGTTGATACA
TCGGAATTACAAGCATATGAAGAACAAGTTCCAAGTACAAGTCAAACTACATCGTTGGAT
GTTACTATTGAAGACGACTCGCCGTCGAACTTGGTCAGCAGCGGTGTGGTTAGTCGTGGA
ACCAATCAAACATCCACTGAAGGTAACGAGGATGGACCCGATAACGAAGATGAAGATGAG
CAACCCACTCCTCCACCGGACAATCAAACGCTACTCAGATTATTAGAACACCATGAAAAA
ATATCGCACATGTTCCGATGCGCGAGGATACAAGGGTTGGATACTACAGAAGGGCTGTTA
CTGTTCGGTCGTGAGCACTGTTACGTTATTGATGGGTTTACTTTACTGAAGAACAGAGAG
ATTCGGGATCTGGACAGTTGCCCAGACGACTATGAGCCCATACTGCCCAGTCAAGGCATC
CAGAGGAGTAATCAGAGGCAATGCTCCAAGTTCCTATACGAAGACATACGAGAGGTACAT
AAGAGAAGATATTTACTGCAACCGATTGCACTGGAAGTGTTTTCGAGCGATGGGCGAAAT
TACTTGCTCGCTTTCCCCAGGAAAGTTAGAAACAAAGTATACAGTCGGTTCACGGCTCTA
GCGACCGGCATGGCGGACAGCGCGGCGGGCTCGGTCGCGGGGCAGAAGCGCGGCGTAGCT
GTGGAACAGCCCGCGGGCTTGCTCGCCACGCTCATCGGCGACACCTCCGTCACACAACGT
TGGCTGCGAGGTGAGATATCGAATTTCCAATATTTGATGCATTTGAACACATTGGCCGGA
CGTTCCTACAACGATCTCATGCAGTATCCGGTGTTTCCGTGGATTCTAGCTGATTACGAT
TCCCTAGAACTAGACTTGAACGATCCGAATACATTCCGCGACCTCACGAAACCGATGGGC
GCCCAGAGCACCGACAGACTGGAACAATTTCGAAAAAGATATAAGGAATGGGATGATCCC
CATGGTGAGACACCACCATACCATTTCGGTACTCACTATTCGTCGGCAATGATCGTGTGC
TCGTACTTAGTACGAATGGAACCGTTCACACAGCACTTCCTGAGACTACAGGGAGGTCAT
TTCGATTTGGCTGACAGGATGTTTCATTCAATAAAAGAGGGGTGGAATTCAGCATCTCGA
CATAACATGGCGGACGTAAAAGAATTGATACCAGAATTCTTCTATTTACCAGAATTTTTG
GTCAACTCTAACAATTTTGATTTAGGATGCAAGCAGTCGGGAGTGGCGCTGGGTGACGTG
GTACTCCCGCCGTGGGCGCGCGGCGACCCCCGCGAGTTCATCCGGCTCCACAGAGCAGCC
CTGGAGTCGGACTTCGTGTCTCATAGACTCCACCACTGGATCGATCTTGTCTTCGGCTAC
AAACAGCAAGGGCAGGCCGCTGTCGAAGCGTGCAACGTCTTCCATCATCTCTTCTACGAG
GGAAATGTCGATATATACAATATCGACGATCCCCTTAAGAAGAACGCAACAATCGGATTC
ATAAACAACTTCGGTCAAATACCTAAACAGTTGTTCAAAAAAGCACATCCCAGCAAGAAA
ATGTCACAACGAAGCTCGACTATCCTCGACCCGAACAATATTATACCCTCACAGGGTATA
ACGCCGCCGGAGAAATTGTTTTTCCACAATCTGGAGAACATGAGACCGTCTTTACAACCC
GTTAAAGAGGTTAAAGGTCCCGTTGGTCAAATACTGTACACGGACAAAGCTATATTAGCA
GTGGAACAGAACAAAGTACTGGTACCACCGTCGTATAACAAGTACGTGGCTTGGGGTTTC
GCCGACCACTCGTTGAGGATCGGTAACTATGACAACGACAAGGCGGTGTTCGTCTGCGAG
ACCGTGGCGCAGGCCTGCGGGGAGATAGTCACCTGCGTCTGTCCCTCCGCCAAGACTATC
GTCACAGCCGGAACTAGCACGGTTGTAACAGTGTGGCAGTACTGGGCGCGGCGCCGCCGG
TTAGCCGTGAAGGTGTGCCTCTACGGACACGAGGAG
(2496 bp)

- SilkBase 1999-2023 -