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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c23884_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101736648_isoform_X1_[Bombyx_mori]
Ontology
GO:0000793 C condensed chromosome
GO:0001666 P response to hypoxia
GO:0004418 F hydroxymethylbilane synthase activity
GO:0004852 F uroporphyrinogen-III synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0009725 P response to hormone
GO:0009743 P response to carbohydrate
GO:0010038 P response to metal ion
GO:0010043 P response to zinc ion
GO:0010288 P response to lead ion
GO:0014070 P response to organic cyclic compound
GO:0016740 F transferase activity
GO:0018160 P peptidyl-pyrromethane cofactor linkage
GO:0030424 C axon
GO:0031100 P animal organ regeneration
GO:0031406 F carboxylic acid binding
GO:0031667 P response to nutrient levels
GO:0032025 P response to cobalt ion
GO:0032355 P response to estradiol
GO:0033014 P tetrapyrrole biosynthetic process
GO:0033273 P response to vitamin
GO:0042493 P response to xenobiotic stimulus
GO:0043176 F amine binding
GO:0043200 P response to amino acid
GO:0048708 P astrocyte differentiation
GO:0050662 F obsolete coenzyme binding
GO:0051597 P response to methylmercury
GO:0071236 P cellular response to antibiotic
GO:0071243 P cellular response to arsenic-containing substance
GO:0071284 P cellular response to lead ion
GO:0071345 P cellular response to cytokine stimulus
GO:0071418 P cellular response to amine stimulus
GO:0071549 P cellular response to dexamethasone stimulus
Transcript
Level		FPKM:63.14 TPM:40.30
ORF EntryO_SariMSG10333_complete:A_SariMSG_c23884_g1_i2
Sequence
(Nucleotide)
TCGTGGCCGTAGATTGTAGCTGCTATCACGATGTTTTGACAATAATAATTAATCTTAATT
TTTTTAATACCAAAATAATAACTCGTCCACTACAGTGTTAGTGACAAGTTATAAAATTTC
ATATACGGCATTCTAAACTTACAAACACATTTAATATCCATTTAGTAACCTAAATAAAGT
TTATGAAGTTATATAAATTATATTAAAATGGAAAATGAAGTGAAAACTACAGTTAGGGTC
GGCTCCAGGAAAAGCGAACTGGCCGTTATACAAACTAAATATGTTATAGATTGCTTGAAG
AAGCAACATCCTGATAAAGAATTTGACATTGTAACCATGACAACGCTGGGCGACCGCGTC
CTGGACCGACCGCTGCCGAAGATCGGCGAAAAGTCCTTGTTTACGAAAGATCTGGAAGAC
GCTTTAATGTGTAATAATGTAGACTTTGTCGTACATTCCTTGAAAGATCTGCCGACTACT
TTGCCTGAGGGTCTCGCTATTGGGGCCGTGTTTACAAGGGAAGATCCTCGGGATGCGTTA
GTACTAAAAGAAAAATACAAAAACCATTCATTATCAACATTGCCAGATGGTTCTGTTATA
GGTACGTCCTCTCTACGTCGAACGGCGCAACTACGAAGTCTATATAAACATTTAATTGTT
ACGGACGTCCGGGGTAACCTCAATACGAGGTTACGAAAACTAGATGACGAGGGTGGTAAT
TACGCTGCGCTTTTGCTGGCAAGCGCCGGTCTTGAAAGAATGGGTTGGGCGCACAGGGTG
TCTGAGGTGTTGCCATGTTCGCAAATGCTATATGCCGTTGGTCAAGGCGCTTTAGCGGTG
GAATGTTGTTCGAACAACAAAGAGATATTATCAATGTTGGCGCCTTTCAATGACCCCGAG
ACTTATTGTAGAGTGCTAGCTGAAAGAAGCTTTTTAAAAACGCTTGGCGGTGGTTGCAGC
GCCCCGGTCGGCGTATCGACGAAACTCAAAGAGCACAAATCATATAAACTCTCAATAACC
GGTGCAGTATGGAGTTTGGACGGAACGATAAAGTTGGATCACACGTTGGACGAAACATTT
GTACAAATAAATAATTCGAAGAAACACAAACTGAGCCCAACGGACGAAACGGAAAATAAG
AAGATAAAGATAGATACGAATAACGGCGGGTGTAATTCTAACGATGTGAATCCTATCGAA
GTACTTAATAGGGGAATTAGTGACAGGGCTGGCAACTTAAACTGTGAGGATTTGGGTGAT
GAGAATAGAAAATCAGGGGGAATTTCAGTGTTCTGCGGTCTCACTGCAAATCCCAACGTC
CCGTTCGAAGTGATTGTGAAATGTGAAGATATCGGCAAACGTTTGGCCAACGTTCTAATT
ACTAAAGGTGCGTTGGAAGTTATGAAGGTATCGCAGGACTTAATAAGGAATACAGGTAAT
ACCAGTTCATGATTATATTTAAATCGATTGTATCATTTGAATGGACACATAAAACTGATA
TTCATTAGGTCAACCAAAAACGCCATTAATATATAGGTCTATTAGTAAATTAGGGGTCGT
CCATTAATCACGTGACGTATTTTTTTATATTCTTTTAAAAAAAATATTGTGACATCGCCA
AAAAATTAAATATACGTGATATCTGTGCACACCAATACCGCCTCTCCAAACCCTCTCTAA
GATTTTGTGTTTTTTTTCAAAACAGTCTACCCACTTTTCAAGTCTAACGTGATTAATGGA
CGACCCCTTATAAGTATGCACATCAATAATTGTGATGAAATAGGTATGTATTTCAATATT
CCATTGGTGACTATTACTAATATAAAGTATATAGGAAAAATATAAATATGGAGAGTAAAG
TTAAGGAGGACTTCGTTTACTAAAAGTGCCAGAGAAATCGAATGACTTTAAAATGGTGCT
ACGTTATCAAAACTCTTAATGTTACAAATACATTAAAATAAAAGATTTACATTTAGCCTC
TAAAAGTCTCTAGAAAGCATTTATTTCAAAACTGTCATAAACTTCCAAGTGTTAATGGTC
ATGATATTGTTCTTATTGTTACGTTGTCATTTATCAATTTCTTTACTGCATTATACCGAT
TACTCTATACCAATAAACTTTTGTGTTACTCCGCAAAGCCCTGTTAAGTTACCAGATGAC
AGCGAACCCCTTAACTAAATTCCGCCCCCCCTCCCCCACCATCCCTCCAAAGAACAAATA
CAGTCCCAAAAGAAATATCTTGTTAATATTAATGTGATGGGTTGGCTGGATGGGTCAATT
TTAGGAGTAATTTTGAACATTTTTAACCTTAATTCTGACTCTGTATCAAGTCGATTTCGA
ACTACTTTTATATTTGACCAATAAGTGTTAGCACTATACTTCACTTTATCTAATACACCT
AACTTCAGATCATACTGTTTGTTACATGTAAACGACATTTTAGTCGATTATGGTGCTCTT
TGAATTCTATAGAGAATTTTTTTTTATGATAACTTAGTCTGTACTTTTATTTGTCATTTA
TTAACTTGCATTATTTGGTCTAATTGATTTCAAA
(2554 bp)

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