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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c23778_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_U6_snRNA-associated_Sm-like_protein_LSm3_[Papilio_machaon]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030629 F U6 snRNA 3'-end binding
GO:0033962 P P-body assembly
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:1990726 C Lsm1-7-Pat1 complex
Transcript
Level		FPKM:14.60 TPM:9.32
ORF EntryO_SariMSG10178_complete:A_SariMSG_c23778_g1_i1
Sequence
(Nucleotide)
GGCAGCTCTAATATAACCTAGCAAGATAAATTATTTCCATTTCTAAAGTTTTTTTTTTCA
TAATAATAGAAACTATTCATAACAAAACTATAACTTAATATACAAATAAGTGTTGATATT
AAAATATTAAATTCTATTACACTGAATAATGGCAGATGACGGTGAAAATGTAGCAGTAAT
GACAGTCAAGGAGCCACTAGACCTCATCAGACTAAGTTTGGATGAAAGAATATATGTTAA
AATGAGGAATGAGCGAGAATTAAGAGGAAAATTACATGCTTATGATCAACATTTAAACAT
GGTCCTTGGTGATGCAGAGGAAACTATAACAACAGTTGAAATAGATGAAGAAACATATGA
AGAAGTATACAGAACAACAAAACGCAACATCCCTATGTTATTTGTTAGAGGTGATGGTGT
AATTCTTGTATCTCCACCTGTACGTGTTGGTATTTAGGTTAAGG
(464 bp)

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