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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c11520_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		protein_TIS11_isoform_X2_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0001570 P vasculogenesis
GO:0003342 P proepicardium development
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0007507 P heart development
GO:0008283 P cell population proliferation
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0021915 P neural tube development
GO:0033077 P T cell differentiation in thymus
GO:0035264 P multicellular organism growth
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0060710 P chorio-allantoic fusion
GO:0060712 P spongiotrophoblast layer development
Transcript
Level		FPKM:33.69 TPM:21.50
ORF EntryO_SariMSG2374_complete:A_SariMSG_c11520_g1_i1
Sequence
(Nucleotide)
CAGTTCAGTTCAGTGCGCGAGCAAGCGTGATACGGAATGTACGTGTGGTGCGTTTTGCGC
GGACGTTGACTGCGATTTATTTTTGATACACAACGATTTATACACCCAGAATTAAGACGT
TTTGGAGTATACAGTCGATAAAGGAAAGAAGTTTTTATTGTAGAAGTCGAGTTTGCGCAA
AATTTTGGCCAACTTTTATGAATTTCCGTATAGACGCGAAATATAAGTGAAGGAGACCCT
CCGAAACAAAGAACTGTTTTGTACATTTTCGCAGAGATTGCGAAATTGTGTTCAAAAATA
CTAGATATCTAACAAAAAGTTGAGGGCGAATAAAAAAAAATTGCCACCCTCGGCCAACTA
GTTCGGACGCATTCTGTAGTTACCGAACGAATAAAACAAAAACGTAACTATACAAACAAC
TTTATGAACTATTTTTATAAAGGGTTCTGAAAAATTCTCGTCAAAGTTTAATGTGAACAT
TAAACATCTAGCCTTATAAAATTATAGTGAGTTCATCGTAATTAAATATTCGTGCATCAG
TGGATAAGTTATCAAATATTTTGATCCAGTAAAAGTATCAAATTCTGGATTGTGTGAAGT
TGTTCATACATGATGTCTACAGCCATAATGCATCAGTCTGCGCTATACGACTTTGGTGAT
CTGTTACTGAAGAGCCAAACTCGGCCAGTGCAGACGATGAGCGGTAACCTCGGTGGCACA
CTCGGTCCCGTCGGCACAAACTCAGTGTCTAGTAACGTGAGCTGGGAGCAACATCCAGTA
CTGGCACGTGTGGCTTCTGTCCCAGCACACCGTGCCCTCGCCGGACTGTTAGACAGACTC
GGTCATCGTCGTCTAGAGCGCACCACCAGTGAACCGGCACCACCACCGCCTGCCACCAGC
CGCTACAAGACCGAACTTTGCCGACCATTCGAAGAGGCCGGAGTCTGCAAGTACGGCGAC
AAGTGCCAGTTTGCACACGGTGTCCGCGAGCTACGCAACTTGCAACGTCATCCTAAGTAC
AAGACGGAGCTGTGTCGCACTTTTCACTCTGTGGGATTCTGTCCTTACGGACCGCGCTGT
CACTTCGTGCACAACGCGGAGGAGGCGCGGCGTCGCGAGCCCTCATCACCGGGCGGCTCC
ATAGCGTCACTCTCTTCGGGAGGATCTATGAATTCGTACATGAGTGATGGATCCCGGTCA
CCACGGTCGCCGCATTCCCCGCATTCGCCTCAGTCGCCGCTAGCGCCACACTCGCCGCCG
GCCCTGTCTCCGCCCGCGTTCGCGTTCCGCCGCTCGCACTCTCCCGACCCTGAGGAGGAA
CGACTGCCCGTGTTTAACCGGCTCTCGTCTGCGCTCGGTGATCTCGTGATCGCCTAAGGC
GCTCCTAGTCGTAACAGACCGAGCCTAGCGTAAGGGTCGTCCGATACCGTTAGTGCCTGT
ATGACGTCTTCCAGTCCGCCGCGCCCGAGCGACGCGTCCCGGTCGCAACGCGCCTCGTGC
ACTCACACACCCGCTCAACGAATGATCTCCAGTTTGTCGATGCTGTTTTCGTATTACTTC
GACCTGTAATTTATAAATATTACCAAGTGTTTACTGGCGTCTCGAAAGTCTGCGGTGTGA
AAACAGTGATTATCTTCAACATTTAGTTATCGGCACGCACTTGTAAATGGCACCTTTATA
TTATTAGATATTTATTGTGTAGCTCGCGGAAGTCTTCCCGATGCGATCCTCCGCCGAGCG
GTGGTCTCTGTAAAGTTAGCATATAGAACATTTATTTATTTCGTACTGCCTCTCCGCGCT
CGGTACCGTACCGCGAGAAGGCGCTCGTGATCTATTTTTAAGAGTTTAAGATAATAATTT
ATTATTTATTTCGAGTCTCTTTAACTATAGTAATTATTATTTATCTAGCAGCTGCGATGC
CACACCGCATACGGACGGGGCTTGCGTCGACGGGACGTGGCTCGTAATATCTGTCCACTT
CGACTGATTCCGATACAGATCCACTTTATTTCATTTTTTGACATGATATATGGAAACAGT
CGACGACATAGTCTCGGGAGCTCGATGGAACAAAACAATTTTTCGCATTTTCTACTAATA
ATTTACAATAACTAAAACATTGCAAACTAAATCTATCATCATCTTTAAAATTATCAAAGT
TATACTAACAAGGCTCCCGCGCCTCTCGGCTTCTCGAGCAGTTTGAAATGGTTTTTTTGT
TGTTTTTGCCTCCTGCGAGGAGGGCGAGTGCGAAGGGCCCAACTCAAACCTGTTTCGGTT
TTGGTGATTCTTTTTTCATTCTTGGCTCGCTCTCCGTTACCCTCGTGGGCAACGCTCGAA
ATTGTTACGATGGACGAGGTTTTGCAGAAATTTAAAAAAAAAATCCAATATTTTATCTCG
TTTGGACTCCCGAGGCTATTATATAAAGAAAAATATATCATATAAAATGTATAGTATGTA
ACAAGATGAAACATATTTATACAGTATATTAGGAGAGCTATATCGTTCCAATCCAATGGT
TGTGCGGGCGCGTGTCATGGCGGCCCTTCTCCCCGCGCGCTTCCACGCCGTCGGGCGCGT
CTGCGCACACCAGATAAGAAAAGAGTGCCTTTTACTTTATATAACAAAATAAATCGATTA
TATTTAAAGTTTAGTTGATCAACATAGTAGATTGTTTATTTATTGTCTCCTTTTGAATAA
AATATTCAAATTGACGCAGTTATTACTTTTTGTATTTTGACCGAGCTATAAACGATTAGT
TTCGACGATGTAGTTATAGATTTTTCTTTGAATTTAAAGTGTGATATTTTGTAATATTTA
TATAATATCAAAGTTTAAAGTTTTAATTAAGGGACCAACGTAATTAATTAGGAGAAATTC
TGATAGAAACCCACATATATACATATTGTAGTACACTAACGCATTATAAATATACCAAAA
GACTGTATCCTCGCGGCAAGTGTAAACTTTTATTGTTTAAATTGTCAAATCAATATTTTT
GTATAAAGAATAAATTAATGTTCGACCATTACTGGTTTTGTGTTTAATTACGTTTATTCT
ATAGAATCGAAGGGTATAATTTATGTTTTCGTTTAGCTGTATTTTTTTTTGTTTCAGTTT
TTCTCCATAATTTATATTAGCGAGTCGTTGCATGGTGACCATTAAATTATAATAATTTTT
GTACCTAATATTAAGAACGTCTTAGTCTTAAGTATTTCATAAAGTTCACGAATATTATTT
ATTATCAGTTCAT
(3253 bp)

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