SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c11343_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_eukaryotic_peptide_chain_release_factor_subunit_1-like_[Plutella_xylostella]
Ontology
GO:0003747 F translation release factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006415 P translational termination
GO:0006605 P protein targeting
GO:0007224 P smoothened signaling pathway
GO:0008079 F translation termination factor activity
GO:0016149 F translation release factor activity, codon specific
GO:0018444 C translation release factor complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
Transcript
Level		FPKM:2.20 TPM:1.40
ORF EntryO_SariMSG2296_complete:A_SariMSG_c11343_g1_i1
Sequence
(Nucleotide)
GACCTGCCCAAGAAGCTCGGTCGTGGTGGTCAGTCAGCTCTCCGTTTTGCCCGTCTCCGT
ATGGAGAAGCGTCACAACTACGTGAGGAAGGTGGCGGAGGTCGCCACGCAGCTGTTCATT
AGTGCGGACAGACCCAACGTGGCCGGACTCATCCTGGCCGGTTCCGCTGACTTCAAGACC
GAACTGTCGCAATCTGATATGTTTGATCCGCGTCTCCAAGCCAAGATAATCAAGCTGGTG
GACGTCTCGTACGGAGGTGAGAACGGTTTCAACCAGGCGATAGAGCTGGCAGCCGAATCA
CTACAGAATGTCAAGTTTATACAAGAAAAGAAATTAATTGGTCGATACTTTGATGAGATC
TCACAGGACACTGGAAAGTATTGCTTCGGTGTTGACGACACGTTGCGCGCCTTGGAACTC
GGGTCGGTCGAAACGCTCATATGTTGGGAGAATTTAGACATACAGAGATACGTACTGAAA
TCTCACGCGACGAGCCAAGAAACTATCCTCCATCTAACACCCGAACAGGAAAAGGATAAA
TCACATTTCACCGACAAAGAGAGCGGAGTAGAGTTGGAGCTGGTGGAGTGTCAGCCGTTG
CTGGAGTGGCTCGCCAACAACTACAAGTCATTTGGAGCAACATTGGAGATCATCACCGAC
AAGAGTCAGGAAGGGAGAGATCGGAA
(686 bp)

- SilkBase 1999-2023 -