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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c11312_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Helicoverpa_armigera]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:62.86 TPM:40.12
ORF EntryO_SariMSG2285_3prime_partial:A_SariMSG_c11312_g1_i1
Sequence
(Nucleotide)
CTGGTGTAGTGTTCTGTTGTCGGTCGAATAGGTATAGCGTGTAAGAGAGTAATCTTTCAA
CTTTGCCTACAAAAGTGTTCAAATATCAAGATGAATACAGAAATGACAGGAAAAGAAATC
AGGAAATCTTTTATTGATTTCTTTATTGGAAAAGGACATAAATATGTTCATTCCTCATCA
ACAATACCACTTGATGACCCAACTTTACTCTTTGCAAATGCTGGAATGAACCAATTCAAA
CCTATGTTTTTAGGATCAGTTGATCCAAATTCTGATATGGCTCAATATGTTAGAGTTGTT
AATACTCAAAAATGCATTAGAGCTGGAGGTAAACATAATGATTTAGATGATGTTGGTAAA
GATGTATACCATCATACTTTTTTTGAAATGATGGGTAACTGGTCATTTGGTGATTACTTC
AAAAAAGAGATTTGTTCTTGGGCTTGGGAGCTTTTAACAGATGTTTACAAATTATCTGGT
GATCGTTTATATGTTACTTATTTTGGAGGTGATCCAGCATCAGGACTCGAGGCTGATTTA
GAATGTAAAGACATTTGGCTCAAATTGGGAATACCAGAGTCTCACATTTTGCCTGGTAGT
ATGAAGGACAATTTTTGGGAAATGGGAGAAACGGGTCCATGTGGACCTTGCTCTGAATTG
CATTATGACAGAATTGGGGGACGAGATGCTGCACATTTAGTAAATATGGATGATCCTGAT
GTATTAGAAATATGGAATTTAGTGTTTATACAATTCAACAGGGAATCTGATGGTTCATTA
AAATTACTACCAAAAAAACATATTGACTGTGGTTTAGGTCTAGAGAGATTGGTGTCTGTT
ATTCAAAACAAAAGAGCTAATTATGATACTGACTTTTTTATGCCTATATTTAAAGCCATT
GAAAATGGTACTGGTGTAAGGCCATATACTGGGAAAGTTGGTGTTGATGATGTGGATGGA
ATTGATATGGCTTATCGAGTTTTAGCTGATCATGCAAGAACATTAACTATTGCTTTATCA
GATGGTGGTTGCCCTGATAACACAGGCAGAGGGTATGTTTTGAGAAGGATTTTAAGAAGA
GCTGTACGATATGCTTCTGAAAAATTAAATGCAAAACCTGGATTTTTTGCATCTTTGGTT
TACACTGTAGTTGAACTTTTGGGAGATGTTTTTCCAGAAATTAAAAAAGATCCTGAATCT
ATTATACAGCTTATCAATGAAGAAGAAATACAATTCTTGAAAACATTATCTCGTGGTAGA
AATTTGCTTAATAGAACCATAGAAAAACTCAGTAATTCTAAAACTATTCCTGGTGATGTT
GCTTGGCGCTTATATGACACATATGGCTTCCCAGTTGATCTTACTCAATTGATGTGTGAA
GAAAATGGTCTCATTATAGATATGGATGCTTATGAAAAAGCTAAAAAAGAATCTCAACTT
ATATCTCAAGGGAAAACAGGTACACAAGAAGATTTACTTGCATTGGATGTTCATGCTATT
AGTCACTTACAAGAGGTTGGAATACCAATAACTGTTGATTCACCAAAATATAATTATATT
CCTTCATCTACAGATAAAGAGGCTATTTATAATTTTACTCCATGCACAGGTACTATTGTA
GCTTTAAGGAGTAACAAAGAGTTTGTAAATGAAGTGAGTTCTGGACAAGTGTGTGGTGTT
ATATTAGATCGTACCAATTTTTATGCTGAGCAAGGTGGCCAAATATTCGATGAAGGTTAT
ATGGTCAAGGTAAATGATGAAAGTGTTGAATTTTCTGTTAAAAATGTACAAGTCAAAGGG
GGTTATATACTACATACAGGTAAACTAGAAGGTTCATTAAAAGTTGGAGATACTTTATCT
TTACATATTGACACAGAAAGACGAAGACTAGTAATGAACAATCATACAGGTACACATGTG
TTGAATAATGTTTTAAGAAAAGTCCTTGGAAATGATTCTGACCAAAGAGGGTCTCTTGTG
ATGCCAGACCGTTTACGATTTGATTTTACTAATAAAGGACCAATGACAGTGCAACAAATC
AAGAATACAGAAGACCAGATTAAAGAGATTATAAATGAAAATAAAATTGTTTACGCAAAA
CACACAAGTCTTAGTGAAGCAAAAAAAATTAATGGGTTGCGTGCAATGTTTGATGAACAC
TACCCTGACCCAGTTCGAGTAGTGTCTGTAGGTGTACCTGTTGAAGATTTGGTAAAAAAC
CCAGATGTTCCTATCGGTTTCGAAACATCTGTAGAATTTTGTGGAGGTTCCCATTTACAT
CGCACTGGTCATATTGGAGAATATGTTATTGTTAGCGAAGAGGGAATAGCAAAAGGGATA
CGACGCATTGTCGCATTAACGGGACCAGAAGCATTAAAGGCTATAAACAAAGTAGTTGTT
TTAGAAAACGAAGTTAATAATATAGCTAATTATATCAAAGAGCAAAATGAAATAAATCAA
AAAGAAATTACTAAAAACATCGTAAACCTTACAAACGATATTTCTCAAGCGCAAATATCT
TATTGGAAAAAAGAAGAATTACGAAACATGCTTAAAAATTTAAAGAAACAACTTGATGAT
AAGGAAAGAGCTGCAAAATCTGCAACTATTAACTTAGTAACCGAAAAAGCAAAGGAAATG
TGTTTAGAATATAAAGATGCTAAATTCATTGTTTCTGAATTAAGAGCTTATGGAAATACG
AAAGCACTTGATAGTGCTTTAAAACAAATAAAACAATTATGTCCTACAACCGCAGCAATG
TTCTTTTCGGTAGATAATGAAACAAATAAAATATATTGCTTAGCTGCCGTCCCCAAAAAC
GCAGTTGAAAAGGGGCTATTAGCATCTGAATGGGTACAATCTGTGGTTAACATAATGGGA
GGTAAGGGAGGGGGAAAAGCAGAATCCGCTCAAGCGTCTGGAAATAATCCGAATTCTCTC
ACTGACGCCATAAAAATCGCCAGATCGGAAGAGCGTCGTG
(2980 bp)

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