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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c11121_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-rRNA_processing_protein_FTSJ3_[Papilio_polytes]
Ontology
GO:0000453 P enzyme-directed rRNA 2'-O-methylation
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001510 P RNA methylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0008650 F rRNA (uridine-2'-O-)-methyltransferase activity
GO:0016435 F rRNA (guanine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:30.26 TPM:19.31
ORF EntryO_SariMSG2188_complete:A_SariMSG_c11121_g1_i2
Sequence
(Nucleotide)
GACTTGGCTGCATGGTCTTGGTACCTTTTCCTATTCCCTAGTAAGGAATAAACAAAACAA
AATTAGGAAAAATATAACCTCTTAGCCCATATGGTGTTATGTATGTTTTCATAAAATAAT
GTTAATGCATTCTATATGGGAATTTCTTGTGTCTGAGGATTAATGTAATAGAATATAAAA
ATGGGGAAAAAATCGAAAGTAGGCAAACAGAGAAAAGATAAATACTATCAATTAGCAAAG
GAAACAGGTTATCGCTCTAGGGCTGCATTTAAATTAATTCAACTTAATAGAAAATTTGGT
TTTCTTCAAAAATCACGAGTATGCATCGATTTGTGTGCTGCTCCTGGTGGTTGGATGCAG
GTGGCACATCAAAATATGCCAGTTTCAAGCATTGTAATTGGTGTGGATTTGTTTCCAATA
AAACCAGTACCTGGATGTATTGGCCTCACTGAAGATATCACAACAGAAAAGTGCAAAACA
TCAATTAAGAAAGAAATTAAAACATGGAAAGCTGATGTTGTTTTACATGACGGGGCACCA
AATGTTGGTCTTAACTGGATCCATGATGCTTATCAACAAGCGTGTCTTACCCTTAGTGCA
TTAAAACTCGCAACAAATTTTCTTAGAGATGGTGGTTGGTTTGTAACAAAAGTATTCCGG
TCAAAAGACTACCATGCTCTACTTTGGGTCCTAAAACAATTCTTCAAGAAAGTGCATGCT
ACAAAGCCACAGGCCTCACGTAATGAGTCATCAGAAATTTTTGTTGTATGCCAAGGGTAT
ATTGCTCCAGATTCTATAGATCCGAAATTTCTTGATCCTAAACATGTGTTTGAAGAATTG
GATATTGTAAAGAAACAACATGCAAATATTTTACATCCTGAAAAACAGAAGAAAGCCAAG
GCCGAAGGTTACCAAGAAAATGATTATACAACACATCACAAAGTCATGTTATCAGACTTC
TTGGACCAGGATGATCCTATAGATTTATTGCAAGGATGTTCTGAGATTGTATTTAATGAC
AAAACCATTGAAGATCACCCTAAATCTACTACAGAAATAAAGGAATGTTGCAAAGATATT
AAAGTATTGGGCAGAAAGGATTTAAAGTCACTTTTAAATTGGTTAAAACAGATGAAGGAA
TTTAAGTCGTCTCAGATCCAAAAAGTTGATGAGAAATCAAAAGATAGTGTTCAAACTGAT
AACGAAGGTGAAGAAAAGGAAGAACAAGATGAAGAGGAAGTTGTTGATGCAGAAATAGCT
GAATTACAGAGTGATGAGAGACGTCAGCTGAAGCGTAAGAGAAAACAAATAAATAAACAA
AGGCAAAAGTTAGCTGAGAAGATGAATCTAAAAATGGTACTTAAAGGTGATGATGGTCCT
ATAATGGAGAACCACGACATGTTTAAGCTTTCCGACATAAAGAATGCTGAGGAATTAGCT
CGTGTTATCGACCAGCAACCAGATATTGTGGCTGGAGTCAGTGATGATTCAGATGACGAG
TTGAAATTAAAACCTAAATATGTGAAGTATGATGTGGAATCATCAAAACTAGATTCTTCC
GGCCTCTATTATAAAGATACAGACAGTGAATTAGAAATGGAATCAGATTCTGATAATGAG
AAAGAAAAAGAATCCTTAGCCTTTTCGGATTCAGAGAATGAATCTAAAAAAATTGACAAA
CTCACAAAACTGAACACACTCAGAAATACCCAAAATACTGTTTTAAAAAGTAAACTCATA
ATACCTAAAAATAACCCATTACTTACTGACTTGGACAACACTGACCCCGTGTCCAAACGC
TCTATGAGGGCACAGCTTTGGTTCCAAAAAGACACTTTCAAAGATATCGACGAGGACGAC
GATGAAGCCGTTGACTTAGATAAAATGGCTGAGACATACAAGGAAAAAGGCAAGAAAGTT
ATAGACAATGAAAAATCGAAGTTGAGTGATATTGACTTGAAAACAAAAGCACCTGAGACT
TCTGCGAGTTCCGATGATGATTCCTCTGATAGTGACTATGACGTGGAAGATAACATAAGA
GAAAGCGCGGGTAATGCTCAATCCAGCAGCAAAAAAGATGGTTTTGAAGTTGTTCCCCAA
GATGCAGAATTGAAAAAAATTAAGAAAACTCTCAAAATGGACGCCGAAACTCTAGCACTG
GGTACTATGATAGCTACTTCGAAAAAGTTCAAAAGGGATTTGATCGATGACGCCTGGAAC
AGATATGCATTTAATGACAAGAATTTACCAGATTGGTTCGCAGAAGATGAGAAGAAACAC
ATGATGCGACCAGTTGCTGTACCTGAGAAATACACAGACCAATACAAGGATAGGCTACAA
GAAATAAACGCTAGACCAATAAAGAAGGTTATTGAAGCAAAGGCCAGAAAGAAGAAACGT
ATGATAAAGAAGATGGAACGCGCCAAAAAGAAGGTGGAAGCGGTTATGGACAATGCGGAC
ATGTCGGAACGTGAAAAGGCGCAACAAGTGAGGCAACTTTATAAAAAAGCAAAATCTGAT
GGGAAGAAGAAAGTAACGTACGTGGTGGCGAAAAAACACACCACCGGTAAACGTGTGAAA
CGACCAGCGGGTGTCAAAGGACATTACAAAGTGGTAGATCCACGAATGAAAAAGGACTTA
CGTGCGCAAAAGGCCAAGGAGAAAACAAAAGGTCGCGGTAAAAAGGTCAAACCTAATAAA
GCTCCTAATAAAAAGAAGGGAAAGGCAAAATGATAAATAAATATATATGTATTCAAAGTT
AAAAAAAAAAAAA
(2773 bp)

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