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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c10177_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_factor_B_polypeptide_1_[Danaus_plexippus_plexippus]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0070449 C elongin complex
Transcript
Level		FPKM:18.11 TPM:11.56
ORF EntryO_SariMSG1948_complete:A_SariMSG_c10177_g1_i1
Sequence
(Nucleotide)
GTCATTTCTATAATCTCTCAGTCAGAAAATAGTTTTTCAATTATACGGTAACGTTAATGC
TAAATCGTTACTCTGTGGCCAAATCGATAGGTTTTGTGCTATAGAAACTGTGTGTTGTTG
AATTACAATATAATACTTCATCTTTTAGGATGTCTGAACAAATCATAAGGTCTGCTTCAG
CAGCTAGCATGACTGATGAGCAACGCTCTGGGAGTTGTGCTGTTGGATCTGGTACTGGAG
GTTCTATGGCTTCTGAGGAGAAGGTGTATGGGGGATGTGAAGGTCCTGATGCTATGTACG
TCAAACTTGTGTCTTCTGACGGGCATGAGTTCATTGTCAAAAGAGAACATGCCCTCACTT
CTGGCACGATTAAGGCCATGCTGAGCGGCCCGGGCCAATTCGCAGAAAATGAAGCCAACG
AAGTTAACTTCAGAGAGATTCCGTCTCACGTCCTCCAAAAGGTTTGCATGTACTTTACAT
ACAAAGTTCGCTACACAAATTCCTCCACAGAGATACCAGAGTTTCCCATAGCTCCAGAAA
TCGCTCTTGAGCTGCTAATGGCTGCAAATTTCTTGGATTGTTAGACATCTAGCAGGTCAA
ATTTCTTATAATGAGGTGTAAATTAACAATTTAAAAAAATACGGATTAGTGTCAACAATC
TCAGACCTAGATATTTTCTAGTTTTCATATTGATGTGTTGTCATACTTTATTACGTCGTA
CGGTTAGTTGTCGAATAATACAGATTTAATATGCGTTGTGCACTACTAAAATACTTGAAG
ATTTTTATGT
(790 bp)

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