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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30472_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_putative_RNA-binding_protein_15_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:9.45 TPM:9.48
ORF EntryO_SariMG16638_5prime_partial:A_SariMG_comp30472_c1_seq1
Sequence
(Nucleotide)
GAATGGATGAGATCAACATAAATTTATTAAAATGATACTAAACAACTGAGAATAAAGAGA
CTTCACTTTATTGATGGGTTTAAGTATTCATTCAAAAAGGGTCTGAGATTCTTAAATTTT
TTTCTAAATCAACATCAGACATTTAAAATGGCAAGAACAGGGTATTTAAAATGGTAAAAA
AAATTATCAATTAATTTCCCAAAAGGTCATGTCAAAGGTCTGATCCATGTTTTGTTTAAA
TTTCTTGAAATAATTAATTCTGTTGTTTGTGATTTTATCTGTAAAAGTTTACAATTAAAT
CATACCAATAGACTTACCCATAGCCATTTTACACTTGTAACTATTTAAAAAACACTATAT
TCTTAAGTTCTTTGTAAACAAATGCAATTTTATTGTCTTATCAGCACTTCCCCTGTATTG
AAGAGGGTACTGGCCTTCGAATAAAATGCTATAATCACTCCATAATATAAGTTTGGGCCA
TGGATCATTTTAAAAATCACAATGCACAACACTTGAGTTTTCATTTGTGCTTTATAATAA
ATCACTATACACAGTGAATTAATACTGGAATGCATTTCACTAATTGTAAACATTTCATTA
AGTACACAAAATTCACACTATCATTAACCACAAAATCACAAGGTATAAAAAAACAACATC
ATCAAATAAAATAATCTATTTGCAGGATCACACACACTACACATCACCTACAATACACTG
AATATAACACTAAAACTCTTTTTATCTGATACATTTTACACTTAGTATTTTGTTTCAACA
GTTTGCTTTTGTATCCCTAAATGAAATTAACTCTATTCACAATATCAATTATTGCTGGTC
ACTACAGTGAGTTACACAGCACTGCACATTAAAAACTATTTAGTGAATCTTCACATGAAT
ATTTTTACATCACCTCACATCACTACACCTCACAAGTATACATAATACATTTTATATCTG
AAAACTTCAAGAAAATTTAGTCAAAACAATAACTTATGCTAACTCAAGTAATATTAGAAA
TAATGACCAGTTCAAGCAGAACCTCCTCGTACAACAACTATTACAAGATGGTCCTCTTTC
AAACTCTCATCAGTCAGGTTGTGACATGTCCTCTTTAAAAGTTCCGTGGAGAATTCACAA
GGAGGAAAGGAATACAATACTCCTGTTGCTTCAGTTTCTTTATTCAGAAGAGAAATGACT
CCTGCTGCTTCTTTTAATTTTAAATACGAAACCAAATTTCTCATTGGCCGTGTCTGAATA
GTTGAATCATCATTTGTGATAGAAGCAGTTGATCCAGCTACACCCAAAAATATTGCATGT
GAGGTGGAAGTTGAAATTCTCTTTTGAACATCATCTAATTTTGGCTGATCCAAGCGCAAT
CTCTGTGTGATTCTCAATTGATTTTTGCCATCTTCATCTCTCATAAGGCTATCAATTATG
TCTGTATCACCATTAGTTAAATGGAACTTTGTAGGGAATAAAGAATTCTTCAAAATTAAA
GCTCCATTCCATACAGTTGTGGCTTTACGTGCTACCTCTGGAAGAGTCCTTGCTGAAGCA
AGCATACCACCACTTCTATGTGGTGATCCATCAGAATCAGTATCTGGAGAATGATGGCGT
AGAGAACGAGATCGTGATCTATCTACTCCTGGTTCTCGAGATCCTGAGCGTCGGATTCTA
CTCTCATACTCAGGGTCTAGTGGAGCCCTCCTCCATTCCTCGTCACGATAATCACCAGAG
CCATGATAGACACCTCTATAAGCCCCACGTCCACGACCTCTGTGTCCTCCTCTTCCTCTG
TATCCTGGAGTCCCATAAGCATATCCATCCTCCCAAGTGCCACCTTCATAGGCTTCATAA
CCTTCAACAGGCCTACCATCTTCCCCTACAGGTGGTGCATAAGGCTTAGGCCTGTATGGA
CCTCCATTGCCTACATCTGCAAAATCAATACGAAGACGTCTTTCAGGTCCACCTAAGGGA
AACCCTCTCATTTCTTTTACAGCAGCTTGCGCAGCATCTATGGAGTCATATAGAATGTAT
GCATGAGGATCATTTTTTGCATATTCAATTTTTTTTATGGCACCAAATCTGTCAAATTCC
CTTTCTAATTGAGTTACTGATGTCCAAGGACCAAGACCGCCAACCCAGACTCTAGTAGTG
GGTGTTGCTTTACCATATCCTATCTTACATTGAAATTTCCCAATATATTGGCCAGATAAT
TCTACCTTTGCTCTATGAGCCATGTCTAAAGTTTGGTAACGTACAAAAGCAAAGGCATTT
CCAGTACCAGGTGGTGGACGTTTTATGTCAATGTCCTCTACTATTCCATAACGACCAAAG
ATACGCCTAAGCTCTTCATCTGATATATTTATTTCCAAGTTACCTGCAAAAAGTGTTCTA
GTAGCCAGTGGATCATCCTCAGGTTGGACATGATGTAAATAATTAGGAAATTTATCTTTT
TTGTTTTCCATTTTCTCAAATGGTGGATGATGGGGACGAGGCATGTATGGACGTGGCATG
TAATGTGGATGTGGAGGATGGTGCATAGGTGGTCGGTGATGCATTGGTGGTCCATGAGGA
CCTGCCATTGGATAATCGTGCATGGGAGGCCTAAAATCTCTGTGATGAGGGGGCACAGTG
GGGGGTATTCCATAAGCCCTATCATCAGGAGGTGGTCTACGGCGTTCTGGTACAGGGGAC
CAAGCATAAGAATAAGAGCGGTCATAGTCAGGTGGAGTAATACTTCTAGGCCGGCTTCTA
TATTCAGATCGAACTGGCTCATAGACTGGATCAACTATAGCAACTTTGTCATACAATATT
ATTCTAGGTTTTGCATGTTTCGCATCTCTTGCGTCTTCAGCACTCCTAAAGCAAATGTAA
GCTACTCTTTCATCTAATTCGTGTGATATTTTAATGCTCAAGTCACCAAACTTTTTGTAC
TCCCTATATAGAGTATCTTTAACAATTTCGTCTGAAGCTTTCGGATGGAGTGCGCTAACA
CAAAGTACTTTATAATAACTACGAACAGACTCTTCCCTAATTTCTCGAGAGCGCACGTAT
TCATCGCGGTGCGGAGACACGTACCGACCG
(3090 bp)

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