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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30458_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
Transcript
Level		FPKM:8.35 TPM:8.38
ORF EntryO_SariMG16551_5prime_partial:A_SariMG_comp30458_c1_seq1
Sequence
(Nucleotide)
GATACTTAAAACGATTTAATAAGCAATTTGTAGCACTGTTAAAAACGTGAGTGATATTTA
TCCTAAATAGATATTTAATCTAATTGCATCCAGCGAAACGAAACTATATGTGGGGGAAAA
CTGTTATTCTCGAACTGAAATAATAATTGGTTGTCGTTGTTGTGGTCATATCGAATGAAA
CAGAGTGAGTGAGACACCATCTAGAGCATGTGATGTATGAAAGAGAAAAAACATATCCAT
AAAGTTACGCAGCCTGATAAAAGTATCAAGTTTTTTGATAATAAAAATTGTATTCTACCC
CTATTTTTGCAAAACAATATTATACATACAGTATATCGATATCTCAAAAATATGCCAACA
TAGGTACGTCTCTATATAGTACAGTAACAAATCGTATCAAATAACGTATCGTAATTGTAT
CGAGATTCGAGAAAATCAGTAAGGACCAGTTACTACATATAAAACAGATTTTGAAAATAA
ATGTGGATCAATATATCATTAAGGTATGATACGCTACATAAGTTATATATTACAGAGTTC
CACTGCAATGAGAAAACAATCCATAGATTGATTAATACTTTTTACAAAGAAAAATAAATA
CAATCTTTCCATATCCGATATGTTTAATATTATTTGATATTGATTTAATTCATTTGTAAA
GGTTTCGAAAACCTTTCTGACTTTAATAAAGATACCTTCACATTTACAAATTTGAAACAA
AATGACTGATCTCAAAATTACTGAATTTGTGATATACATAAATATCGATTAATAATATGG
CTCATGATGAAATATGACTCGTATAAGTAATACAGTATAAGTTGGAACTGCAAAGGATTA
AATAATACCCAACAAAACTGGTCCGGTCCTGCCATCAACTTTTCACTTTTATACAAACAT
CATTGTTGCTCAAGTTTATAAAGTATAAAAACAAAGAAAACAATTAGACATTGAATACTG
ATAGGTACGAATTTTCGGAATATCAAGTGACACCGCAATGACACAAAAAGCTTCTTCCCT
TAAAATTAAATATGTGTGTAAATACAAGTTGAAACGACGACGGTCCAACAAACCAGAGCG
CGCACGAAACACAGACTATAAGCCTTAAGCGTAAAGAATAAATAATATAATCGTGAAAGC
GGAAACTAAATTACATAAATAGGCGTAGCGTTCCCGAGGGGCTGAGGCAGGAAGGCGTCG
CGTTCTTACAACTTTACACGTATGGAGTAGCATCACAGAACAAAACTACGGCTAAGCAGA
CATCGGGCGGCGCTCGCCGCGCCGGACTAGACTGAGGGGGCGGCGGCTCCGGCGCGTTCA
CAGCCCCGCGAGGGGATCGCACGACGGGCCCGGACTCGGACCCGGACCCGGACCGCTACT
CGTAGCTACCGGCGTCCCGTCAGCACCACCGGACACGGTCGCACCCGTTGAACCAACAAT
CGGGTTCACATTAGCTGCCGGAGGTGACAGGTGTAAATGCCTCGTTGGCAATTCATCATC
AGCTGGCTCCTCGTCATCACCGCTATCTTCCCCGGGTTCACCAGAGCCAGAGCCCTCGGC
AATTTCGCGAGCTTCCTCTTCATCCTCATCCTCGTCTTCAGGACATAACTGGTATGCCTT
TTCCAGTGTTTTTCTCGCCGAATTACTGCGTTCTAGGAAATATCCTGTGGAAGTCTCATT
CGATGTTCCCGGCGGAGACCAAGTCCCGTACGAAGCGTATCCTCCGGGGCCATAGCGGTC
GAGTTCGTCCTGCAGCCAGGCGAGCAGCTGTCGCCAGCGGCGGCGCGCGTCGGGGTGCGC
GTGCACGGCGCGCACGGCGGCCGGCGCGCGGGACATCACCCCCACGACTAGCTTCACGCA
CGCGTACGCACGCTTCTGGTAGTGACCGCGAGCGCGCGCCGCCGTCTCCAGCAGTCCCGG
GCGCTCCTCAGATACACCTTTAATGACATTGTGTATGCGATGATGCTGCCAACTGTCCTC
CATTAAGAGTATAGCGGTGAGGGCGTCGGCGTGTCGACGCAGCTCGTGGCAGTAAGCGTA
CGCCATCTGCCAGAGCAGCTCGGCGAGCGCCATGCGCGACCAGCCCGCGTGCTCCCAGCA
CAGGAACTGCACCAACCTTATACCCTCTTCGCATCCCCCACAATCCTCTGTTAACTTTTT
CATATATGTTCCAGTTCTGTTATAAAGTATCTCGGCGGCGGCGTGTGATAGAGCCGGTCG
CGCAGGCGATGACGTCACAGAATGCGTAGGCGTGACAGGAGGATCCGCGTACGGGTTGGG
GAGGGGCGCGACGCCCTCCGCCGCCAGTGCAGACTGACAACGCGAACTCACGTCGCAACA
TCGCGCCAATACGCACACGACTTGATGTACTTTAGCAGATTCAGGATATTGGTATTTCCC
AAATGACGAAGACGAGTCATCGATACAAACAGAGAGCACGACGTCTAAAATTTTCAGCCG
GAGTAGTTGATGTTTCTCGCTGAGGCCGAGTAAGGCGTAGGTGTGGAAGAGGTTGAAGAG
CAGCGGCAGGTGCCGATGCGCGTGCGCATCCGAGTGGGGGGGCGCTGCGAGCGCGCGCGC
GCTGCATATCACCTGGTCCGAGAGCGAGGTCGCCTCGTCGAGCGCGCACCACGACCCGTA
CCCCTCGGTTACCGGTGGATCCTGTATGGAGAAGTGTGCCAAGAACATGATAATTTTCAT
AAAAACCAATCGCACTTCAGCAGAAGGACAGGATAGTAAATACTCAGATAATCTATGTGG
ATGTAGGAATAAATCTGTCGCGAACCACGCCCTTACAGTTTGCGAACAACGAAGGTGTTG
ACATAAAATATCCTGCCAATCGCCCGCAGGACCACGCAGCGTTTTTTTTGTCCGAAATCC
TAAAAGGAATAAAAATTTCGTCGCTAACTGTACTGCCAACATTGACATCTCTTCGTGCTC
TGGACCCCAAACTGTACTCTGTGAACCTACTATTTGTAATCTCATACAACAAAGTTTCTT
CATAAAGTTAAAATGCTCCAGATTGAATTGGTCCTGATTATGTGAAAATGCAATATTACT
TCGACGCACAGAAAGCCATATCGGTCTGGGAATAAGACTTTCCTTGAGACTTAAACTTTT
CATAGACTGTTCGATATTGGCTGTTTCTAAAGTGTCCTTTCTTGTATAAAATAACATATA
AGCATTCCACCATCTTTTCTGGCGTTTATATGAAACCCTTTTCAGCATGGGATCGAAAAC
CTCGCCCATATATTCCCCGCCGAAGCACTGTACTTTCAGTTCTTCATCATCATGCATTCC
GCACTCTGACACGTCGCCGTCGTCTAGTTTCACCCAACGACCAGTTTCGCTTCCATTATC
CCTGAGCAGTACGTATGAATAGTAATGTCCGCCGGATGCTTGTCCCGAGTGTACAACGAT
ACCGCTCAGCTGGTACTGCGTGTGATGCGTGCGCTGCTCCCCGCCTTCCCACAGCGAGGC
GTCGCCCTCAGCGCGCGCCAACCCCCACGCTGTATATGGTTCAACATCCAAATCCCTTGT
AAATTCAAAATAATCGTTGAATTTTATTGCACACACTTTCTCGAAATCGTATTCAAATCT
TTTAAGTTGTATGACTAAAACTGGGGGTAGTTTGTTCAAACACAAACGTTTTACTGTCAC
CACCTTTTTATTACATTTGTCGCAATGATAAGCATCGGCACCTTCC
(3706 bp)

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