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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30458_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_[Danaus_plexippus]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
Transcript
Level		FPKM:4.67 TPM:4.68
ORF EntryO_SariMG16548_3prime_partial:A_SariMG_comp30458_c0_seq1
Sequence
(Nucleotide)
AAAAGTGTAACTGAATTTGTGTTTTTCTTTGTGATTTTTTCTGTGATTTGGTTGCATGTA
TATTGTTTAATAAGAGAATGCAATGAATAATTATATTTTGATATAATGACTATATCTATG
AAGGAACAGGAAGAAATGCCTGGGGAGATGGGGTTCCCTGAGGCAAAGTTGAAAGCATTA
GAGGAAAAAATATCACATCCTCGCTGGGTTGTTCCAGTATTGCCTGAACAAGAACTAGAA
GCATTACTCATTGCTTCTATAGAATTGGCTTTAAAAGGTGAGGATTATAACAACCCAGCT
TGCCAGCGATTTTATAATGAAGCACTTACAGTATCTTTCACAAAGATATTGACTGATGAT
GCTATCTCCTCATGGAAAAACAATATTCAGCAATGTGTACGATCTAACTGTGAGAAGTTG
GTGAAATTATGTGCAATGAAGTTAGATGACCCACGATTTTTACATTTACTGTGTATGGTT
TTTAACCCTGGACATAAGTTTCATACATTCAATGCATCTCGTTCGTGTGATGGTCTATCA
GCTATTTGTAATTCCTCATCTACAGGCCAGGGATCTACTCAAGAAATCGAACCTTTTGCT
AAATCACAAGATCATCGAACACCTAGAGGATGGCTGGTCCATCTCATCAATGTGTTCGGT
CAAGCAGGAGGTTTTGTTAAGCTGAGAGAGAGATTTGAAACAATAATGGGTTTCCAAAAA
CCAGATATGACGGCATCCATTAACTCCGAGGAAAAAATTTCTGAGGAGATAACAGAAAAA
GAAAATGAAGAAAATAAATGTGAAATGGTAGAAAATGTTGATCAACCAGCAATTATGACC
GAAAGTAGTGATTTTTCGTCGTCATCACGAAATGAACAGCCGTCGTCATTAGAGAGCTCT
ACGAGTGGTGAAACGCGAGTCGCTGCAGTCTGGCATCTCATACGCCCTCTTGGTTTATGC
CATGACTTGCTCACTTCACACACTGTTACGACACATTTGCTGCCCGTTCTCGAGTGTATA
CCCACATTATTGGAAAGTCTAACAGATGATGAGTTAAAGAGGGAAACACGAGGTTCTGAA
AATAAGACTGACACAGTTTCATGTTTGATACGAGCATGTAAATATGTGGCCATTAAAACA
CCCCACCATCACAATTTATTTAAATCTCTTGAAATGTTTCGGTTGAAAATGATCCTGAGA
TTATTAAAAATGTCGTCATTTAATGGAAAAATGTCGGCGCTACATGAAATCAACCAGTTG
ATCAGTAGTTTTTCGCAGCAAACGAAGCCAGAGTGGCTCACGCCGGCTGTCATTACTAAT
TGGATTCGTGAAAATAAAGTACTTGATATAGTGCTCAGAGATTCGCTTCATCAACCCCAG
TATGTTGATAGATTAGAAAAAATGCTAAGGTTTATGATAAAAGAGAATTCATTGACTAGG
GACGATTTAGACGCGCTATGGAGAGCGCAGCATGGTAAACATGAAGCTATTGTTAAAAAT
CTACATGACTTATTAGCTAAATTAGCATGGGACTTTACACCTGATCAATTGGATCATCTA
TTCGATTGTTTTAAGGCCAGTTGGGCTACGTCATCAAAGAAACAAAGTGATAAATTATTG
GAAGTTATCAGGAGACTAGCAGAAGATGACAAAGATGGAGTAATGGCAAATAAGGTAATA
GTACTGTTTTGGAATTTGGCACAATCAGCTGAAGTTTGTACTGAGATACTGGACGTAGCG
ATATGTAACCTTATTAAAATACTTGACTATAGTTGTAGTCAAGATCGTGATACTCAGAAA
ACGCTTTGGCTCGATAAGTGTGTTGAACAGTTGAAGACGAATGAAAATTGGGTATTGCCA
GCGCTTAAAATGATGAAGGATATATGTTGTTTGTATGAAGCGGGCGGCGGCACGGGCGTC
CGTCCGCATGTCACGCGACAGCAACTCATAGACCGACTACAGACTCAACACTCGCTGGTC
ATACTGGTCACCGACTCGCTCACACACTACATGGAGGGCGTTCGTAAAAAGCTTGCTGAG
GAAGGCAATATAGACTGGGACAACTGGTTACCCGATAATCGATATCCGCATGCGATGCAA
GTACAAGAGCGACTTAATTTTCTTAGATTTTTATTAAAAGATGGACAGTTATGGCTTTGT
GCTGAGCAGGCGAAAGAAATTTGGGTATGTTTAGCAGAAATGCCAGCACATCTAGGAGAC
CGCGAAGCTTGTTTTCGCTGGTTTAGTAAACTAATGGGAGATGAGCCTGATTTGGATCCT
AATATAAATTTACACTTTTTTCGACGGAACATAATGACTTTACCTCCGAATTTGTTAACA
CATGCAGGCATCAAATGTTTCGAAAGGTTTTTTAAAGCAGTCAATACCAAAGAAGGTAAA
CTAAAAGTGAAGAGACGAGGCTTTTTACTTAACGATGCTGATCTCATAGGATTAGATTAC
TTATGGAGAGTTATAACGGAGTGCGACGACGAGATATCGGCGCGCGGTATCGAGTTGTTG
CGCGAAGTGAGTACGTGCGTGGGGACGCAGCTCTCCCCCGCCATGCACCACGAGGCGTTT
CTCACGCAGTGTTGCGCGCGAACGCAGCGCATGCAACGAGAAATGGACCAACAAGATGCA
TCTGTAGCTTGTACTAGAATGTGCAGAGTGATACGTGCCATACAAGAATACATAAATGAA
TGTGATAGAAGATTCTCAATAGACCGACAGATATTACCCATATACAGGGCCGGTCGAGGC
AGACAGTGTATAATAATAGTAAGATTCAATTTTCAAACTGGCCAAAGACAAATCGAGGAT
ATAGAACTGTTTTGTCATTCAAATGAAACCATACACTCTCTACGAGTGGCAATTCAAAGG
AGATTAAAATGTGGACCAGATAGCAATATAAAATTAGATCTATATGTAAATAAATTGGAG
CTGTATATAAACGGGGAGCTCATTGATTCTAGTCATGACAGGAAAATACTTTCGCAGCTT
CACCTACGTGAGAAAACTGTAGTTATTGCTAAGGTATACGATGGTCAAGTGTGTGGAAGT
GGTGGATGTGGTTCTTCAAATGAAACTAGCAGTGACTCAAGCACATCATCTCCTCCTCTT
TCATCTACCCCAGAACATGCGTTACCTGGTGTGCTCTTTGCCCAAGGTTCGTGGTATTTG
CCATTTATATTAGAATTGGAACACATTGGCATAACAAAGACCCACATCCCGTTGACCGAG
GCAGCACATTTACTCTCACAGATATGTCCAGCGCACAAGCAAACTATTGAAAAATTGACA
GAATCGTTATTAAGCCGTGATGATGCTAAATTAAGGGATCTGCTCTATGGACCATCGCCT
CCGACTGTGGCCTACAATATAGAGGTATTATATAGCATGGTTCTGCCGTCATCTGAAACG
AAATTAGAACGCAGTCGTAGTTTCCAATTGGCTTGTGCTAAGAAGGCACCCCTTTTGGTT
CAGTGTTTATCTGATAAAGATTTTTTACTAGGGGCTGCTCCTCATACACGTCGTGTTGGC
AGCTTAGCCTTAGTGCGGTTAGCGAAATTAGCGCTGTATACTTTGGGATATTTGTTTGAA
ATACTAACCCCAGAGGAATCTGATGTTCCTATTGACAAGGAACTGAGGGCAGATGTTAAT
ATATTGAGAGAAGCCTTACAGAGTACGCCTAGTCATAGTTGTGAAACAGTTGTCAAATCT
ATAGCTGAAAAACTGGCAAATGCTTTGGGTAAACAGGTTGTGGTTAGTGGTGAAGAGAGT
GACTTAATCTCATCTCTTGTGTGGTGGCGAGTTCCAACAATGGCTACGGTGCGTGCGCTC
TATGCTCTCGCGTTTTCAGTTGCACAGAGTGTCGAGGTAACCGGCCTGGTACACCCGGAA
GATATTACATTGGTTCGGGAGTGTATGGAAGTTGTCACGATATGTATGGCGCTAGGTAGA
GGGCGACTCGAGGTGTTGCTCCAGGAACCCTGGTGGCAGGATACAGCTCTCTATTTGATG
ATTGACTGTCCTAATCCTCAAGTGCGAGTATCGTGCGCGGAGCAACTGCTGACGATGTGC
GCGTGGGGCGGAGGGGCGGGGGCGCGGGGCGCGCTCGCCGCTCTCGGCGGTGCGGGGGGC
GCGCGAGGTGTACGCCTGCAGCAGCACGCACGGAATGCACAGCAGTTCTTGCAGTTACTG
TGCCGGCTCGTTTCACTAGCTGGCCCCACTTCACGCGCTCTGGATGACCTCGCTGAGGAG
GTTGCGTGGTTGCGTGCTGTGAAAGCAAATCCGGAGACACTAGATGATACACTTCTTGAG
GGTCATTTAAATTTAACCAAGGAACTATTCACACATGTGCCGTCACAAGTCAAGTACCAG
TATGGTGCACATCCAGAACACAAGAACTCAGGCTTAATAAAGGAAATAACAACAGAGTTC
CTATGGCCGTACTCGTGGGCATGGTATACATCGATGGAGGGTGACGAGAACCGGCAGGAG
AGTGAACCCCCAGAGCCGCTGTGTCGGTCGCCGGGCGCCATTTCCGCTGCCACCGACTTA
CTGCTGGCGCTCGTGCACGGCTGCGTGCCCAACATGGCCGTGCTCGCAGCTCTACTCGAG
AAGATGTTCTATACTGATAAATGCATGCCACTATCAGATTGGGAGTATTTACCCTGTGTT
GGTCCTCGGCACTCAACTGGCCTGGTGGGCCTTAAGAACGCAGGTGCTACGTGTTATATG
AACTCTGTATTGCAACAATTGTACTGCGTGCCATCTGTACGGGATTCAATTTTAGCTGTT
CAAGGCGCTGCGACAGATCCAAATGAAGATTTTACCGGTGAAAGTCACTTTCACAGTATC
GTAGAAAATAACTCTGAGAGCAATAACATATATAATATCACGATATTAAAACAAGTCCAA
GCTATATTTGCTCATTTGCATTATAGTAAACTTCAATTCTACATTCCTAGAGGTTTATGG
GCATATTTTAGACTTTTGGGTGAACCAGTTAATTTGCGTGAACAACAAGATGCGGTGGAA
TTTTTCATGTCTTTAGTTGAATCATTAGACGAAGCTTTAAAATCTCTGGGCCAGGAACAA
CTCATGGCGAAAACAATGGGAGGTACATACTCAGACCAGAAGATATGCAAAGGCTGTCCT
CACAGGTATTGTAAAGAAGAACAATTCAGTGTGGTCTCTTTAGATATTAGAAACATGTCC
AGGCTCCAGGAGTCTTTAGAAGCTTATGTGAGAGGTGAATTGTTGGAAGGTGCCGATGCT
TATCATTGC
(5289 bp)

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