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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30457_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:0.68 TPM:0.68
ORF EntryO_SariMG16547_complete:A_SariMG_comp30457_c0_seq5
Sequence
(Nucleotide)
TGCGCGTTTGCGCCGGCAGTCGGCATACCGCCCGGGCGGGCGCCACACGACCGGGATCTG
CGCGAGCGACGTGCGGTGACGCGAACTAAAATTATTTCAGTGAAATAAACAAGCACCCGT
CGACCGCTCTACCATGCGAGCGCAAGATTCTGTGAATTAAACACGAGTTTAGTGAACGAG
TCTCGAGTGCAGAGCACAACGACGGCAGTCGCACAACGAGAGAGCGATTAGGGTTCATAG
AACCCCCTACGACGAAACGATTCGAGTCTGGTGCTGGAGAAGCGGTATTCTCAGCCACCC
CTCGAAATATTTGCGTAAACTTAAATCAGCATACAAAAATACAATACACATTTCTTAACA
CAGAGAAAACAATAAACGGAAAAATATCGCTAAATGCTGTAGTGCATTAACCAAAGACAA
ATATTTTGATAATCGAACGCCATTGGGAAACCGCGTACGACGGCTGTCACATAACAAAAC
GCGGGAAATTTCGTGTGCGTTCAATTACCTAGTATATTGAAAAGTTTAATTGTGGCAAAT
CGGAAAAAAATCGACAAGATGCAGACACAAATTGGAGTCGGTAATGAGCTGCAGCGGAGC
TACAGAATTCAAGATTTCGCGACGCCTGGCGTCATCATGAGAGAACGAAGTTTCGTACGA
CCACAGTCTCATCACAACATGCATCATAACCAGTTTTCAAACAATGCCAAACGTCGAAGC
ATGATCCTTACGAATTCTAAAGGGAAACCCACTCTCGAAATTTATAGACCGCCTGGTGTC
CGAACAGACGGGGTTGCTACGGTGACGGCGGGCGGCACAATGGTCACCACGAGCAACTCA
TCGACATCTACGAACAAGCTCAACGTGCATGCTAAGGAATTCACCATGGCCAAGCCTGTC
GACCATAACAACAGGCCGGCGATGGGTATGGGATATGCGAGCGTCGGGCTGCAGCACTCG
CGGTCCGCAGTGCTGCACGCGCAAGTGCCGCCGCACTACCGGCCCGTATTGCCGCCCCAC
GCTCTACTGAACAGCACATCCAGCGGGAACGTGCCTCACGCACAGGTCGGGCCGCGCGTT
CACTTCAAACTGCAGCCGCAGAATTCTGTCATACACGAGAAGAAGAGGTCCCCTCCTTCG
TCCCTGACTAATGGTAATGGGAAGGGAGTCCGCCCTCAGTCGTTTACTCCGGGGTTAAAG
AGGTCTAAATCGCTGACCTCTGCGGATGCGTTGGCCAGCGGTATGGCTGCGCTGGGTCTC
GCCGCCGACGCGGGCGACCTCGGCACGTTCCCGCCTGATATTCAAGAGTGCATCGATAAA
GCACTTGAAGATCCGAACGCTGTGTGCGCTCGTACGCTGATGGACGCGGTGGGGCACCTC
GTGTCGCGCGCCGTCGAGTCGCCGCGGTACGCGCTGCCGGCCGCGCGGCGCTGCATCGCC
GTCGTCGAGCGCGAGCAGACCGAGACCTTCCTCGAGTCCTTGCTCAACACGTGCCAGCAG
TGGTACCACGACAGGGAGAAGTTGTTGGGGACAATGGTGGGCGGCGGTCGGCCGCGGCTG
ATGGCGTTCCTCTCGTTCCTGTTGGAGATGTACTGTCAGTTGCGCAGACGCACGATACAG
CGCCGCGGCGCGAGCGCGCAGCCCGGGCAGGTCCTGCTCACGCTCATCTGCAAGTGCTGC
GAGGACTGCATCCGCCAACCCGTGCCCTCCGCTAGCGATACGGAGAATCTGTTCTTCGTG
CTTACGTACATCGGTCGAGATCTCGAGGCTCAGTTGCCGGGAGACCTCGAGCGGCTCCTG
ACGGCTGTCCGCGACGCATTCCTTAACACCGCCGCCGCGCCCTCCATCCGCAGGACTCTG
CTCCAGCTCATAGAGCTACACGCGTCCCGCTGGCAGCTACCCGGCTGTGCGGTACTCTAT
TACTATCCCTCATCGAAATAATGTAAGGTTTGATCGATATCGATTTGATCGACACTGGAA
CAATATCGATACTGTGATTAATTGTTAAATACTTTTGAAATATCAGAAGATGTCAAAACT
TACGCTGTATGGCGCCAAAAGACTTTGGGAAGTCGACGTTGCTGTTCCCGTGTTATTGAT
ATATCGATTCTTTTCGAATATCGTTCATCCCTACTATACGATGCAGCTATAATATCATCT
ACATATGCTAAGTCTTAATGTTAAGTCGTATCTTATGACTGACTTTGATTCATTATGGGG
TCTTTATAATTATTTAACTTAATAATAGGTAAATGTAAAGTACATTATACTTATTTTTTT
AGATTAACAAACAAAAGGGTAGCTTTTAGTAACCAATCGGGATATGATGGTGTACTCACG
TATTAAATCTAATTAGGATTTAAACTTATGTTCCTATTATATCAAAATCACTGATTCTTA
GTTTTCACCGAAAAGAGGGTGTTTAATATCAACATTAGAGTTTTATAACACAGAGGTTAC
AAAAAGCATTTGGTTTGGTTTTCTTTCTAAGTTTCAGTACTATTGCGTTAGTCCTATTTA
TGTTTTGTTGGCTCGAGGCTGCCATAAGCTCCATAATAGTGTGCCTTTATAAAATATTTT
AATAGACTATTCATGGTTTTTAACATATATTAAAAAATACAGCAAATATGAAAGCCTGAA
ATGGTTAGTATATATTTATTTGTAAGGTTTTAATCATTTATAGCTTAAGGTATAGATTAT
ATACAGTAGACATAGAGGATTGATATACGCCTTGAAAGTATTAAAAAAAGTACGTGTAAA
AAAATAATTAGTTTTGGACAAATGTATGGTGTACATTACTGTACGACTCTCGCATAGTAC
ATCGTGCATTGTATCCTTTGTCTATAATTTATTATAAAAAATCTAACTTTAGATGTTTTG
CCGACTCTGTCTCTAGCTTTGTAGCACCTACTGCTTCGTGTATTGTTTGCCTGCAAATAA
TTGTTGTATTTAGTTAAGTTCCATTGCACTAAATAATGTAAACGTTGATGATGCACTATG
GTATTTAGTTGTATTTTTTTGTCTCTTTATCAAATCATTGCAAAAAAATTACAGAAATGA
ATTTGACTGAATATTTTTTTTTATAAATGAGCTGTTTTTCAATGTTTTACGCTTGTGATA
TTATAAATTTTAAGTTAAATAATCTCGATGTCTTTTCTCTGTCCCTAACCAAAGACTGTA
CTGATGGGAGATTCATTTTAATTTTATTAAAAAAAAAAAGAATTAATATTGTTGAAGCTG
GACCAAATTTTCTTCGTTTCGAGGTTTTTCTTTATGGGTGTGTTTCATTAGCATGATGTA
ATAAGTTCGTTATTTACTTAGGCTATTCGACTCAATGCTTTGTCAAATGGATAGCTTAAG
TTTTGTTAGTTGGATATTAAAGGAGAAAAAGTTAAAAAGACCATGAACTTTTTGTTACTG
TGCATTCGTAGTAATTTAAGGTAATGATAATGTTATGTTTGTAGAAAAAAAATGAAAAAA
AAAAATGGTGCTAACTAAAAAAAAGTATTGGTGTATTGTATAATATTCTCATAGATTACG
GGCAATAACAATATTCTCGTTACCGCTATAAATTTTTTTTACGATTAAAACCATTTTAAA
GGAATTATTATAACCAATAAAACTCTATAAAAACACGAA
(3639 bp)

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