SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30432_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:10.35 TPM:10.38
ORF EntryO_SariMG16396_complete:A_SariMG_comp30432_c0_seq2
Sequence
(Nucleotide)
AATAAGGTTAATGTTGTTGAAGCGTGTTTTTATAAAATTTCATAATATGACAAATGTCCC
TTATATATCTATTTATTTCTTAATAACTTTGAAACTAATTCAAATGAAATTTAACATAGA
CATGATTTTGTTCTAGTAAACAAACAGAGGAACTTTTAGTAACTCTAAATAGCTCTGGTG
AGTTACAATAACTTATATTATGTGTAGCATAATTTATGTGAAACGAAACAAGCTGGTATC
GCATATATTCGATATATTTTGAAAATTGATAGTGATTCCCTTCCTAATTAATAAAAGGTG
TCATATTTTTTTGTCATATCATTTGACTTTTCGAAAATTCGAGAATTTTATGCAATTTGC
AACAACAGGCTATACAAAATTATATGCTTCAATTCTTCTTTAAAGAAAGTTTTATAACTA
GTAAATAATGATCGAGTGGGTGGAAATCCCTAGAACGTAATCCAAACTGGCCGAGAAATA
TGCGATGACGTACAAAACGATATAACTAACTCTAACAGATTTCACAATGGCGTATGAATA
TTCCAGATTTCTCTGAATTTAAGAACCATCAGAGTCGAATAATACATACCTAGACTATTA
GGTACTTAAAAAGTGACTGAGGCACTTTTATAGCATTTCGCATAAGAGACGCCCACAATA
ATCATAAAAGAAAAACTCGGAATAAATCAGAAATGAGAGCTCAGGCCTTTCGGTTAGGCC
GAAAGTATGGCTCAAGTTCAGGCCCAGGCATTCTAAACCGCGTGGCGATACAGTGTCTCA
GACAAAATAACTAGGCTTTAGGCCTATTTGACGAGTACAGAATCAAAAAATTGAAACCGA
GTAAGGGAATGTCGCTTAATATGGCCTTTAAAAGCTAAAGGACGTTCAGGATTAGAAGAC
AGTGACCGTTCACTCGAGGTAGTCGGTGTAGCCCTGGGCACCTGTGAAAATGACGTCGAT
CCAAATGCGTGCCGCTTCACCCGAGGGCGCCATGAGGAAGTATCTCCGCTGACGCGTCTT
CACTATGAACGTGGTCTGCGGGTTCGGGGACTTGGACGTGTTCCCGTGGTCGAGGTACAC
CTCCTCTATCACTTGAAAATAAGCACCGCCTCTCGGTTTCTTCTCGCTCTTGTCCCAGTA
GTAGACGAACGTTTTCGTTTCTCTATCGAAAACGAACCACCGTTTCGACCACGTATGGAA
CTTAGCCCCAAGCTTGTGCAGATAACCGCGGCATGAAGTCGAGTTTACCATCACGTAGGA
GCACAATTCGATCTGGTGCCCGGCGGACTCGACGTGCCGACGTAGATCGAAATCGTCACG
ATCGACTGGCAAGTATCTAGTGAGGGGTCGCTGTGCCTCGCTGTAGGGGGCGATACCTCG
CCTACTGCGTCTCGGAGCGTTGCTAAGCGATAGTATATTATCTCTGCTGAAGTCTGAAGC
ATGGCTGAGCGGTCGACTGTCATCGCTGCGTTTATCGTCCTCCGTCGACTCAGTACGGGA
ATTTCTGACTTGAAGCTCTTCAATCGACGATGACATAAGCCCCGAACAACACAACAACGT
ATTTTTCTGTTTCATTTTTGACATTATACTTATCACATATTTTGTTCTATCACGTCACCT
TTACGAACACTGTATTATAGTTTTTGTAAAATGAATTGCAAAGTAAATTATATTTACGGA
CATATTATTGATCGGGTATATCAGTATCTTTAGTAATATTGAAATATACAATTAAATTGA
ATTTGGTTTAAAAATGACTTTCTGTAATTTTCCACTA
(1777 bp)

- SilkBase 1999-2023 -