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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30404_c0_seq8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:1.52 TPM:1.52
ORF EntryO_SariMG16116_complete:A_SariMG_comp30404_c0_seq8
Sequence
(Nucleotide)
TGACCTTTTACACTGGACTGTTTCATTAAATAGGCTTCTATATTTTGCAATTACTGACTA
TTATTTATTACATTATTGGCGTTCATTGAATTCGAACGTTGAAATAAATTCAACACGTGA
AATGATATGAATGGTCATGCTTCAAAAACTTTTTGAAAATTGTTACGAACGGAAATGTCT
GTACATTATAAGTTCAAAAGTGCATTGGATTATGATACGGTTACCTTTGATGGACTCCAC
ATATCTGTAGGAGATTTGAAAGCCGCTATATCTCAGCAGAAGCGTATTGGAAAGACCTCA
GACTTTGATCTGCAAATTACAAATGCTCAGACTAAAGAAGTTTATGTGGATGATAACACT
TTAATTCCAAAGAACACATCACTTCTTGTGGCTAGAGTACCACTAGCTCAATTGCCTAAG
AAACAGTGGGAAAATACTAACAATAATCAATCGACATTGCATAAAGATGTGGCCCCGAAC
AAAGGAGTGGCTGATTTATCTCGCATGGAAGGTAGCGAACAGGATAAAATAAATGCTATG
ATATCACAGTCCACCTTTGACTACGACCCTAGCAATTACCAAAAAATTAGGGGGCAGAAT
CAAAGAGGAGCTGTTCCAGCAAATTACATTTGCTACAAGTGTCAAAAGCGTGGACACTGG
ATTAAAGATTGCCCTGCAGCAAATTCAGGTGATCCAGTTGAAATAAGGAGGAGTACTGGA
ATTCCTCGTAGTTTTATGGTACCTGTTGAAGGGCCTAAGGCTCCAGGCGCCATGATGACT
CCGAGTGGTACATTCGCTGTACCAGCTGTCGACCATGAAGCGTATTTAGCTTCGGAGAAT
GCGGGTGGCGGTGACACACCTACTAACGCACCGGCCGCCCCCGAACCGAACATACCAGAC
GAGCTTATATGTAGTTTGTGCCGCGATCTCCTCACCGATGCCGTCATGATACCGTGTTGC
GGGAATTCATTCTGCGATGAGTGTATCAGAGGTGCTCTGTTGGAATCTGAAGATCGCGAT
TGTCCAGATTGTCGGGAGAAAGAGATTGCTCCGACAACATTAATTCCAAATAGGTTTTTA
AGGAATTCCGTGTCTTCGTTTCGTAATCAAACTGGTTACAGTCGTCGCACGCCGCACCGG
CCTTCTGCTGCACCGATGCGTCCACCTGTATTAGAACATGTCCCCGCACCTCACGGCCAA
CAACCGCCGAATGGTCCTAGTCAGCCTCAGGAGCCCAGCACCAACGAGGGTCGCGTCGGG
GCTGAAGAGTCTGACGGGTCTGCGGATGACAACATCACGGTGACGATGCCGCCTGCACTA
GCGCATCACCCCGGGCCGCACCATACCCAGCGCCAGCCGACTCTGCATCGACATCCGCGA
TACGGACCACCGCTGAATACAAAGCACAATATCGATAACAATCCTCTCAACATTCCAATG
AATATGCCAAGAGTCGATGAGCAGAGAGCCAGCACACCGACTGTAGATGAACGGAGAGAT
CCGATGTCTTCGCAGATGGTGTACAATCGAGGTCCACCGCATTATCTATCTGGATTGCCG
CCGCCCTCACGTTATGAACCTCCGTATGGAAGGCCGCCGCAATTCAATGAACGGTATCCA
CCAGAACCATACCAGCCTCCACCACCCGGAATTAAGGATTCCCCATCTCACGGGGTAAGT
GAGGATCCGTTGGAGGCGTTCAATCGGATGATCCGAGAGAAGGAGATGCGAGCGAAGCGG
CGCGAGGAGGAGCGTCGACGTGCTCAGTCGGGGTCACGGTCACGGTCACGGTCGCGGTCT
CGGTCGCGCACACCTCGGTCGACGCGGTCGGGCCGGTCGCCTCGGTCGCCGCGGTCGCCG
CACGCGCGTCCTCGCAGTCCAGCCTCCAGTCGCATCCGTTATTCTAGGTCTCGATCACTG
TCCCGTGGACGCGCGCGGCGTTCTCCTTGGTCCCCGCGACGGAGGCGCACGCGTGACCGT
TCTTTATCACTTACTCGTTCACCGTCACCGCGACGGCGACATCGTTCACCGTTGAGATAT
CGGTCCCCCCTGCGGTCGCCGGGGCCACGGTCCCCGCTGCGTACCCCATTACGGTCGCCG
CTGCGCACCCCGCTGCGGTCTCCGCCTCGGTCGCCGTTGCGATCGCCGCGCCGCTCCCCG
CCGCCCAGGCCGCTGTCTCCGCACAGACCGATGTCGCCGCTCAGGCCGATGTCACCGCAC
AGATATGCCGGAGTGTACGATGAACTATTGTCGCCGCCGCGTCGTAGTGTTGAGCCACCC
TACGGACCCAGATATGCTTCTAGAAACAATGGACCTCCATCGATTTATCCGCAAGGTGCT
GTGAAATCTATTCCTCCTATGGGAAACATGCCATTACAATCTGATCAAGGACCTGGATAT
AGAAACCGTTACGATATCCACCCATTTGAAGATATTCCTCCGGGAATAGAACCGCCGGTA
CCTGGATTTGAACCATCACCTTTTGAAAAACCCCCTTTTACTCAACCCGGACCAATTGAT
CGAGATCGGTTACCACCTAATTATAGAGATCCTTATAGAGCCCCGTCGTTTGTTGAAGGA
CCAACAACTTATAGGGATATATCTATGCCGCCTGTTTCTAACGACATACCAGTTCACGTT
GCTGATCCATCGCGTTATCGAGATAACTTTAGACCGGGACCATATCGTGATCCAAGTACT
GTTCCGTTCAGAGATGGGCAGCCCTATCGAGATGTAGGATTATCAGGGACTTACCGTGAT
CCTAATTTTAGAGGTGGACCTCCTCCTTTCCGTGAAAACTCGTATAGGAATATTCCATAT
AGAGAAGGTGGTTTTCGAGAACATCCTCATAACAACTTCCGGGAAGGAGGAATGCCTTTC
CGACCTCCAAGTACAGATCCCAGAGAGTCGACGTTACCCAGTCTTCTTGATCAAAATTAT
CGTGATACGTTTAGAGATGACGGTGTGACGCCTAGAGATCACACTCGTTCGGGATATAGA
CCAAATATACGTAGTAGAATTGGACCAAGACGCAATCAAAACGTTGAACATGATAGACAC
AGGGAAAGAGAAGGACGTGATCGAGACCGGGATCGTTACAATGAAAATCGTGATCCTTCC
GATAGACCTGAAAGAGTCCGAGAACCAGAAAAGAGAACTGGCCACGATAAAACTCGTGAA
GGACGTGAAGAGAGACAACGTGATTACGAAAAAGAACGTGATAATGAACGAGTATCCCCT
GATAAACGAAGTCGTTTGTCTCCTAAACGAAATAGAGAAATACGTGATAAAAAACGCAGT
GAATCGAGAGCTCGTTCACGGGACCATGACCGTGACAATCGTCGAGATAAAAAAGAAGAA
AGAAATCATGATAAAACTTCTGCTGATAGAAATAGAGATCACAAAGAGAAAGAAAAGAAA
ATAAAAGATAGAAAAAAGAAAAAACGAGAAAAGGAAAAAGATTCTGAAAAAAAGAAGAAA
CGTGAAAAAAAGGATAAAAAAGAAAAGGATACTAATAAAAGAGAAGATGAAGATATTAAA
ACCGATACTAAAAATGATGAAGGTAAAAGTCAAAATACAGGTACAGAAAAACAAAATGTT
ATTAAAACAGAAAAGTTAGATGAAAAAGAAACAGTACCACCAATAGAAAACTCTCCTAAG
TCAAACAACACTGAAAAACCGAAAAATTACTTATACGACGATGAAGCTGCAGAAGCTGTT
GATAAAGAAATTATACAAAATTACGTTAAGAATGAGGATACTGATACGCCAGTAAAGAAA
AATGACCAAAATAGTAATTTAGATGAACCATTTGATGGTATAGAACTTCAAATTAATACA
GATGAACTTGATTTAAAACCAGAAATTGAAACTACATCAAACAAAGAGATGTTAGCGCCG
ATGCCTGAGTTGTCTAAATGGGAAGTTGAAGAAGAAAATGCAGAGAAAACCAAAGAGCCC
GGTGAAATTACATCTCCTGAAGAAGGGGAAAATAGTGGCAAAGTTACATCAGACGTAATA
AAACGAGCTGAAAATGCAATATTTGCGAAAGCTATAAATTCACTGAGACCTATAGAAATT
AAGAAAATAAGTAGCGATCGCCTCAAACTTTATGGAGATGAGCAGCCTAAACCATGTATG
AATAATATTCAAATAACAGTTCCTGTAGTCGACACGGAAACAAGATCCATAGAAATACAT
GATAAAAAGAAAAGACATTCTAAAACACCGCCGCCAAAATTATCGGTCAAAGATCGTCTG
GGAGGTAAAGTCGACGAAATTCGAAGGGGTAGAGAGACTCGTGTTGTACATAGCACTGTA
GAACGTGTTAAATCTAGGTCAAAAACACCTAAAAAAGAACAACCGTATCGTAGAGTTACA
GTGGAAAAAGACAGAGGTAGAAAACAGGTTGCCATTGAAAGAACCGGGTCATCTAAAAGT
GAACGGTGTATATTATCAGGAGTTAAAGTTGAAAAACATAATGTTAAGAAAGATTCGGAA
AAAAGTGCAAAAGTTGAAAAGACATCTGAATCTCGTACTTTAAATCAGAATAAAAATGAT
CCTTCCAGTTCTAAAACATCTAACCTAGATCGTGAAAGAAAGAAATCAACATTGGACGAA
GCACATTTTGTACCAGATTACGATGAAAATGTAGACTCTGATACTGAAGTGAAAGAGGAA
TCAATAAAGAAGCGGGAACGTTCTATTTCACCTTCCGGCAAAGAACAGACTGAAACGAAA
AAACCTAAAATTGATACCAGCTCTATTAAATTGGATTTAACAAATGTGAAAAAGAAACCT
GACACTGAAAGTGAGAGTTCAAGTGATTCAGAATTCTCTTCATCGTCTTCTTCGTCCGAT
GGTCGGAAACGGAAAAAGAAGAAAAAGCGTACCAAGAAGAAGAAGAAGCGCGCTGCTAGT
GACAGTGACAGTGAGTCGGGTTCAAGTTCAGATGACCATAAAAAGAAAAAAAAGAAGCGT
AAACATAAGAAGAAGTCGAGTAAGAAGAAGAAGAAATCTAAACATAAGTAACGTGTTTAT
TGACAGATAATGTGATTACCACAATTTTTATTAGATATGTCGTTACATTAGGTAACAATT
TATTATCATTTCGCAAATTCACTAATTAAATAAGTTGTTTTCTGTATGAAATTGTATTGG
GCAAAGTAAT
(5170 bp)

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