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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30404_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RBBP6_[Papilio_xuthus]
Ontology
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:0.47 TPM:0.47
ORF EntryO_SariMG16104_complete:A_SariMG_comp30404_c0_seq4
Sequence
(Nucleotide)
TGACCTTTTACACTGGACTGTTTCATTAAATAGGCTTCTATATTTTGCAATTACTGACTA
TTATTTATTACATTATTGGCGTTCATTGAATTCGAACGTTGAAATAAATTCAACACGTGA
AATGATATGAATGGTCATGCTTCAAAAACTTTTTGAAAATTGTTACGAACGGAAATGTCT
GTACATTATAAGTTCAAAAGTGCATTGGATTATGATACGGTTACCTTTGATGGACTCCAC
ATATCTGTAGGAGATTTGAAAGCCGCTATATCTCAGCAGAAGCGTATTGGAAAGACCTCA
GACTTTGATCTGCAAATTACAAATGCTCAGACTAAAGAAGTTTATGTGGATGATAACACT
TTAATTCCAAAGAACACATCACTTCTTGTGGCTAGAGTACCACTAGCTCAATTGCCTAAG
AAACAGTGGGAAAATACTAACAATAATCAATCGACATTGCATAAAGATGTGGCCCCGAAC
AAAGGAGTGGCTGATTTATCTCGCATGGAAGGTAGCGAACAGGATAAAATAAATGCTATG
ATATCACAGTCCACCTTTGACTACGACCCTAGCAATTACCAAAAAATTAGGGGGCAGAAT
CAAAGAGGAGCTGTTCCAGCAAATTACATTTGCTACAAGTGTCAAAAGCGTGGACACTGG
ATTAAAGATTGCCCTGCAGCAAATTCAGGTGATCCAGTTGAAATAAGGAGGAGTACTGGA
ATTCCTCGTAGTTTTATGGTACCTGTTGAAGGGCCTAAGGCTCCAGGCGCCATGATGACT
CCGAGTGGTACATTCGCTGTACCAGCTGTCGACCATGAAGCGTATTTAGCTTCGGAGAAT
GCGGGTGGCGGTGACACACCTACTAACGCACCGGCCGCCCCCGAACCGAACATACCAGAC
GAGCTTATATGTAGTTTGTGCCGCGATCTCCTCACCGATGCCGTCATGATACCGTGTTGC
GGGAATTCATTCTGCGATGAGTGTATCAGAGGTGCTCTGTTGGAATCTGAAGATCGCGAT
TGTCCAGATTGTCGGGAGAAAGAGATTGCTCCGACAACATTAATTCCAAATAGGTTTTTA
AGGAATTCCGTGTCTTCGTTTCGTAATCAAACTGGTTACAGTCGTCGCACGCCGCACCGG
CCTTCTGCTGCACCGATGCGTCCACCTGTATTAGAACATGTCCCCGCACCTCACGGCCAA
CAACCGCCGAATGGTCCTAGTCAGCCTCAGGAGCCCAGCACCAACGGACCACCGCTGAAT
ACAAAGCACAATATCGATAACAATCCTCTCAACATTCCAATGAATATGCCAAGAGTCGAT
GAGCAGAGAGCCAGCACACCGACTGTAGATGAACGGAGAGATCCGATGTCTTCGCAGATG
GTGTACAATCGAGGTCCACCGCATTATCTATCTGGATTGCCGCCGCCCTCACGTTATGAA
CCTCCGTATGGAAGGCCGCCGCAATTCAATGAACGGTATCCACCAGAACCATACCAGCCT
CCACCACCCGGAATTAAGGATTCCCCATCTCACGGGGTAAGTGAGGATCCGTTGGAGGCG
TTCAATCGGATGATCCGAGAGAAGGAGATGCGAGCGAAGCGGCGCGAGGAGGAGCGTCGA
CGTGCTCAGTCGGGGTCACGGTCACGGTCACGGTCGCGGTCTCGGTCGCGCACACCTCGG
TCGACGCGGTCGGGCCGGTCGCCTCGGTCGCCGCGGTCGCCGCACGCGCGTCCTCGCAGT
CCAGCCTCCAGTCGCATCCGTTATTCTAGGTCTCGATCACTGTCCCGTGGACGCGCGCGG
CGTTCTCCTTGGTCCCCGCGACGGAGGCGCACGCGTGACCGTTCTTTATCACTTACTCGT
TCACCGTCACCGCGACGGCGACATCGTTCACCGTTGAGATATCGGTCCCCCCTGCGGTCG
CCGGGGCCACGGTCCCCGCTGCGTACCCCATTACGGTCGCCGCTGCGCACCCCGCTGCGG
TCTCCGCCTCGGTCGCCGTTGCGATCGCCGCGCCGCTCCCCGCCGCCCAGGCCGCTGTCT
CCGCACAGACCGATGTCGCCGCTCAGGCCGATGTCACCGCACAGATATGCCGGAGTGTAC
GATGAACTATTGTCGCCGCCGCGTCGTAGTGTTGAGCCACCCTACGGACCCAGATATGCT
TCTAGAAACAATGGACCTCCATCGATTTATCCGCAAGGTGCTGTGAAATCTATTCCTCCT
ATGGGAAACATGCCATTACAATCTGATCAAGGACCTGGATATAGAAACCGTTACGATATC
CACCCATTTGAAGATATTCCTCCGGGAATAGAACCGCCGGTACCTGGATTTGAACCATCA
CCTTTTGAAAAACCCCCTTTTACTCAACCCGGACCAATTGATCGAGATCGGTTACCACCT
AATTATAGAGATCCTTATAGAGCCCCGTCGTTTGTTGAAGGACCAACAACTTATAGGGAT
ATATCTATGCCGCCTGTTTCTAACGACATACCAGTTCACGTTGCTGATCCATCGCGTTAT
CGAGATAACTTTAGACCGGGACCATATCGTGATCCAAGTACTGTTCCGTTCAGAGATGGG
CAGCCCTATCGAGATGTAGGATTATCAGGGACTTACCGTGATCCTAATTTTAGAGGTGGA
CCTCCTCCTTTCCGTGAAAACTCGTATAGGAATATTCCATATAGAGAAGGTGGTTTTCGA
GAACATCCTCATAACAACTTCCGGGAAGGAGGAATGCCTTTCCGACCTCCAAGTACAGAT
CCCAGAGAGTCGACGTTACCCAGTCTTCTTGATCAAAATTATCGTGATACGTTTAGAGAT
GACGGTGTGACGCCTAGAGATCACACTCGTTCGGGATATAGACCAAATATACGTAGTAGA
ATTGGACCAAGACGCAATCAAAACGTTGAACATGATAGACACAGGGAAAGAGAAGGACGT
GATCGAGACCGGGATCGTTACAATGAAAATCGTGATCCTTCCGATAGACCTGAAAGAGTC
CGAGAACCAGAAAAGAGAACTGGCCACGATAAAACTCGTGAAGGACGTGAAGAGAGACAA
CGTGATTACGAAAAAGAACGTGATAATGAACGAGTATCCCCTGATAAACGAAGTCGTTTG
TCTCCTAAACGAAATAGAGAAATACGTGATAAAAAACGCAGTGAATCGAGAGCTCGTTCA
CGGGACCATGACCGTGACAATCGTCGAGATAAAAAAGAAGAAAGAAATCATGATAAAACT
TCTGCTGATAGAAATAGAGATCACAAAGAGAAAGAAAAGAAAATAAAAGATAGAAAAAAG
AAAAAACGAGAAAAGGAAAAAGATTCTGAAAAAAAGAAGAAACGTGAAAAAAAGGATAAA
AAAGAAAAGGATACTAATAAAAGAGAAGATGAAGATATTAAAACCGATACTAAAAATGAT
GAAGGTAAAAGTCAAAATACAGGTACAGAAAAACAAAATGTTATTAAAACAGAAAAGTTA
GATGAAAAAGAAACAGTACCACCAATAGAAAACTCTCCTAAGTCAAACAACACTGAAAAA
CCGAAAAATTACTTATACGACGATGAAGCTGCAGAAGCTGTTGATAAAGAAATTATACAA
AATTACGTTAAGAATGAGGATACTGATACGCCAGTAAAGAAAAATGACCAAAATAGTAAT
TTAGATGAACCATTTGATGGTATAGAACTTCAAATTAATACAGATGAACTTGATTTAAAA
CCAGAAATTGAAACTACATCAAACAAAGAGATGTTAGCGCCGATGCCTGAGTTGTCTAAA
TGGGAAGTTGAAGAAGAAAATGCAGAGAAAACCAAAGAGCCCGGTGAAATTACATCTCCT
GAAGAAGGGGAAAATAGTGGCAAAGTTACATCAGACGTAATAAAACGAGCTGAAAATGCA
GAGAAAACCAAAGAGCCCGGTGAAATTACATCTCCTGAAGAAGGGGAAAATAGTGGCAAA
GTTACATCAGACGTAATAAAACGAGCTGAAAATGCAATATTTGCGAAAGCTATAAATTCA
CTGAGACCTATAGAAATTAAGAAAATAAGTAGCGATCGCCTCAAACTTTATGGAGATGAG
CAGCCTAAACCATGTATGAATAATATTCAAATAACAGTTCCTGTAGTCGACACGGAAACA
AGATCCATAGAAATACATGATAAAAAGAAAAGACATTCTAAAACACCGCCGCCAAAATTA
TCGGTCAAAGATCGTCTGGGAGGTAAAGTCGACGAAATTCGAAGGGGTAGAGAGACTCGT
GTTGTACATAGCACTGTAGAACGTGTTAAATCTAGGTCAAAAACACCTAAAAAAGAACAA
CCGTATCGTAGAGTTACAGTGGAAAAAGACAGAGGTAGAAAACAGGTTGCCATTGAAAGA
ACCGGGTCATCTAAAAGTGAACGGTGTATATTATCAGGAGTTAAAGTTGAAAAACATAAT
GTTAAGAAAGATTCGGAAAAAAGTGCAAAAGTTGAAAAGACATCTGAATCTCGTACTTTA
AATCAGAATAAAAATGATCCTTCCAGTTCTAAAACATCTAACCTAGATCGTGAAAGAAAG
AAATCAACATTGGACGAAGCACATTTTGTACCAGATTACGATGAAAATGTAGACTCTGAT
ACTGAAGTGAAAGAGGAATCAATAAAGAAGCGGGAACGTTCTATTTCACCTTCCGGCAAA
GAACAGACTGAAACGAAAAAACCTAAAATTGATACCAGCTCTATTAAATTGGATTTAACA
AATGTGAAAAAGAAACCTGACACTGAAAGTGAGAGTTCAAGTGATTCAGAATTCTCTTCA
TCGTCTTCTTCGTCCGATGGTCGGAAACGGAAAAAGAAGAAAAAGCGTACCAAGAAGAAG
AAGAAGCGCGCTGCTAGTGACAGTGACAGTGAGTCGGGTTCAAGTTCAGATGACCATAAA
AAGAAAAAAAAGAAGCGTAAACATAAGAAGAAGTCGAGTAAGAAGAAGAAGAAATCTAAA
CATAAGTAACGTGTTTATTGACAGATAATGTGATTACCACAATTTTTATTAGATATGTCG
TTACATTAGGTAACAATTTATTATCATTTCGCAAATTCACTAATTAAATAAGTTGTTTTC
TGTATGAAATTGTATTGGGCAAAGTAAT
(5128 bp)

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