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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30331_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_unconventional_myosin-IXa-like_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0001726 C ruffle
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0007165 P signal transduction
GO:0007266 P Rho protein signal transduction
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016887 F ATP hydrolysis activity
GO:0017048 F small GTPase binding
GO:0030027 C lamellipodium
GO:0030048 P actin filament-based movement
GO:0030898 F microfilament motor activity
GO:0032011 P ARF protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0035385 P Roundabout signaling pathway
GO:0035556 P intracellular signal transduction
GO:0042803 F protein homodimerization activity
GO:0043008 F ATP-dependent protein binding
GO:0043531 F ADP binding
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048495 F Roundabout binding
GO:0051015 F actin filament binding
GO:0051056 P regulation of small GTPase mediated signal transduction
Transcript
Level		FPKM:3.09 TPM:3.10
ORF EntryO_SariMG15587_internal:A_SariMG_comp30331_c1_seq1
Sequence
(Nucleotide)
GGGTCGTGATGATGCCGGCGGACCGGGGGCAGGCTGACCAGCCCCCGAGCCGGCTCCAGG
GTGGTGCTGGACAGGCTGCGCTGGTACACCTGTGGCGAGCTGCGTCTTGAACTGCTTCGA
GTACTGTCCGAATCTGCGGGATTCCAGAAACCAATCTGTCTTAAATATTCTTCACTACTG
CTCGTCATAGATTCGACTAATTCCTCCAACTCTTTTTCTCTTTCACGCTTCTTCTCGGCT
TTAAGATAGTTCTGGTCTATTCGGAGCCACAGCATTTCGTTAGCGAGATCTTCTGGTGTT
ATTCTGTTAGGTAATTTAACACCGTGAGGATACCTCCACTTGTCACTCGCTGGGGATTTG
CCTTCTATCCATTCTAATGCCCCAGGTTCATACTCCTTAGCGACTAATTCTGTATTCCTT
TCGGCATTCAATACTCTTCTTTTCCCATAATGACTCGATGGTGATTTCGATATATCTTCT
ACAGAAATTGCTTCGCGTTTTTTGTCCAAACTCTGTATAGGCAGTGACTGGGTCGCTCTT
AACAATCTCGTTTTTTCTGCATCCAGATGTAATTTTATCATGTCTAACTGTTCATCACTA
TCGGCATGATATTTCTCAGTACAAGACTCCCGAATCTTGTATAGTTCGGCTTTAGTCAAC
GCAACCGCTGCTTTACCATCATGCTCACATTTATTTGTTTTATTTTCCTTCGACTGTGGT
ATCATTTTCCTCCGGTCCGGTAAAGTTTTTCTTAACAAGAAGCCCCGGGACGCCGCTTGG
AACGCCACGATGCTGTTACAGAACTGTATGTACCAACGCCTAATGCGAGAGCCGCGAATC
CATGATTGCACTTTTGTCGCGGCTTCATTCCTTACCGCTAACCATTGTCTGCAGTAGAAC
TGCAAGAGCGTGGAAGCCCTGCGCAGCGCAAGGAACCTGCGGCGTTCGAGCACGGCGCGG
AACCAACGCTGTATGGTAATTATGGACGCCATGATCTGTTGGTGCAGCCGGTACTCTAGC
TTCGTCTGCTCGCTCTCCCGCATAAATATCTTCGTCGTACCCAGCTGATAGTTATCCCTG
TCCAAGTTGAGAGTGGCCAGAAAGTGCCTCACGTCGGTCTGCGAACTCAGCAAACCCTTG
GGCAACAATATCCTGTAGAGCTGTATAAACTCTTCGTATGTGAGCCGAACATTGTACCCG
GCTTGTCTAATCCTTACGGTTTCTAGCATTCCCGTGTACCGTAACTGACGTTGTACCGTC
TCATCGTCAAATACATGAGGCACTTTGTCGCTGTTCGACTTTATACATCTAATGAAAAAT
GGATTCGCTTGATTTAATGTCTCCATGAGCGCTGCGAGTGAGTGCTGGAACTGCGCCGCG
ACAGTCATAGGTTGTTTCCGCTTGCCGGTCGGTACAGCTATCCTACCGGCTAGTGTCTTT
ACACTCTGAAGGTTTTTTAACCCCTTCTTGGGTCGCTCACGAGGCCTGAACGATTTATTT
TTCTTTATGAGACTATCGTTTGGTGCGTGAATCGAAGCACGCGGTACTCTTGAAGCACCA
TCGACTCTTTGAACTCTGTGCCTTCTTCCGGCTTCTAAGAATGCGAAGTAACCCCTAAAA
AAAGCACGGACTATAGCCCATCGGAATACAGCGACCGGATCTACACCAACAAGTTCCCTG
ACGAAAGCTAACGAGGAGTTCTTCAGCACGCTCACAATGTCCTGCCGCATCAAGTCTAAG
TTCTTTTCCCGCATCACTGTCACCTGATACTTGACCCTGCCGGCGTAATGGCGCACAACG
AAGGCCGGTTCCCGTCTTTGCGGTTTCTCATAGAACTGATTACTTTCATGCACAGAGTTG
AATTTCTGTAACAGTGTCTCGTTCGTCGCCCAGGGGAAATTGCACTGATCATCGAGTAAG
GACAACAACCCGTTGAGTTTCCCCTCGATGAGTTGTAAGCACCCTGTATTATCAGAGAAG
CCGATGTCGGTCCATCGGATGCCCTCGCGTCTGTACTCCTCCTGTTCGTACTTAAACACG
TGCTGGTTGAAGTAGTACTGCAGGTGCTCGTTCGCGTAGTTTATGCACAGCTGTTCGAAA
CTATTGCTCGGACCGAAATCTTCGAAGCCGAATATATCGAGAACTCCTATACTATTTCCC
TGATGTTCCCTGAGTGTATCTTTTTTGGAGAGCAGAGCGTGGTTCACTTGCATCACTATC
CAGTCGAATAGAGCACCGTACAGACATTTCGCCATTGCATCGCGAGTCGCTATTGCTTCA
GGTAATCTATAATTGATAACGAGGGTCTCCCCCGATGCTCGCGCCCGTTTCGACGTCAGG
GCAGCTAATAATGTTTCCTGTTTTACTCGCAATAGTGATGATATTAACGATACAACTTCC
GGGTTCCGAACACCCACTGCCTCGTCATGATGATATGATTTTCTTTGGGGCTGGAATTCC
ACATTACCCAAAAGTAGCACTGCAGACAAAACAGCGAATAATCTCCGCTGCTTGTCCATT
GTGAAGCCCACCATCTCCATGGACTGCTTGAGCCTCGAGAATTCATACTGTTCATCGGTT
CCAGGCACATCACTACAACCAGTCCGAGACAAATAATTGTACTTATCCACACTGAGTAAA
TGTAACTGTTCCTTCTCCTGTTCAGAGGCGCCGGCCAACAAATAATAGAACACATGGTAG
TTCCTCTCGTTACGACCCTGACTACATATACGCGATTTCTCAAGTAGATACTTCTGCACG
ACAGCACCGTGAACCATGCCATTTTCTTTATAATTAACTTGAATGAACTTTCCGAAACGA
CTCGAGTTGTTGTTGTGAGCAGTTTTCGCGTTACCAAACGCTT
(2863 bp)

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