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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30330_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_huntingtin-interacting_protein_1-like_[Amyelois_transitella]
Ontology
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
Transcript
Level		FPKM:2.59 TPM:2.60
ORF EntryO_SariMG15578_3prime_partial:A_SariMG_comp30330_c0_seq5
Sequence
(Nucleotide)
AGTTTATTTACCGTAAAATATTGACATTTTTATTTTTAAATCTCTTTTGAAATAAATTTT
GAACACCATATTAAATATATACGTTGCGGTTCGTGTTAGTACGATACATAGTTGTTCGTT
GTCATTCTTAATGAATATAATTTTGTAATAGTGGTCTAGGCTCATAAGTAGAAATAAAAG
TTAGAATACATTTTCGTAGGTGTATGCCTTATGTGTGAAACTTATGGCGTCCTTATCACT
GCCTCGTGTGCTTCAATTAAAGAAGAATAGTGTTGATGCTGAAAGAGAGCAGTTCGAAAA
ATATCAGCGTCATACTATCACCTCTGCACGTAACTAATGCATGTCACTGACTGTCAAACC
GCTGCGTACTGCTACTTACAACTAACACGTTACTATGGCGAACACCAACGATAAACGCTT
CTTTCAACTGACACTAGCGATCCAGAAGGCGATAAATGCGAACGAGACGCCTGTCAAGGA
GAAACATGTCCGCAGTACAATCATCGGCACATTCCAGGAACAGAGCGCTTGCACGTACTG
GATGGTGGCGATCAGGCAGCCACTACAGGACAATCGTATTGTAGCGTGGAAATTCTGTCA
TGTGACTCACAAACTCCTACGCGAGGGTCATCCGGCTTGTTTAGATGACTCGCAGCGCCA
CATCGGAATGATCGAGAATTTGGGGAAATTGTGGGTACATTTACGTGAAGGCTATGGGAA
ATTGGTTCACTTGTACTGCGACTTGTTGGTCTGTAAGCTGAAGTTTCACGCGCGTAATCC
ACGTTTCCCGGGGAATATGCAACTCACAGCCGATGAGTTGGACGCTATCGCCGAGAACGA
TGTCAATAACTATTTTCAATTATGCGTCGAGCTTTTCGATTATATGGATGACATCCTGAC
GTTACAAGCGGCAGTGTTTGATAGTTTGGGTAACGCGCGCGCTAACTCTATGACGGCGAG
CGGACAGTGCCGGCTCGCGGCGCTGATACCGTGCGCGCAGGACGCCTCCCACATATATGA
CTGTAACGTACGCCTGCTGTTCAGATTGCATGCCTCCTTGCCCGCTGACACGCTTACAGG
ACATAGGGAAAGGTTTCGACAGCAATTTAAGAAGTTGGGTTCGTTTTATAAGCACGCGAG
CAGCCTCCAGTATTACAGGAATTTGTTGACCTTGCCAGTGCTTCCCTCTAATCCACCAAA
CTTTCTTCTACAGAGTGATTTCGGTACGTACGTGACGCCGGTCGTCTCGATACCGGAACC
GCCGCCGGATGAAGTAGACGCAGTCGGATCTCTCATCGACACTTCAGATACATTCAGCCT
GGCCACCTCAGATCACATAGAAGAGCTGGACACAAGGCCAACTCCTTCACCACAACCAGA
CCCGGTGATAGAGAGAGACAGACTTATAGACCATTTACAAAACGAACTTAAAAGGATGAG
GACAGAAGTATCACAGCTTGTACAAGAAAGGAATACAATGCTGGGTTCAATGCGAGAACA
CTGCACAAGGCTAGAGACACAGTTACATGCGGCTAAGTCCGAATTGGAAGAGGAACGAGA
AAAAGCGGAAATTTTATCAGTTCAAACGCCGGAAATTAAACAAAAACTCAGTGAAACTGA
AGAAAAGGCGAAAGTTGTGGATGAAAAATTCCAAAAGTTAAAAGGGGCGTACACACAATT
ACGCGAAGAACACATCGCATTGATAAGACAGAAGGCAGAAGTCGACAAGTTAGCTGCAAA
TTTACGTTCGACGGCCGCTCAGCATGAAAGCGCTAAAGTGGCCTTGCAGCAACAACTGAA
CGATCGAATGAAAGATGTAGAATTACTTCAACAAAGCGCGTCTTCCAGTGAAGAAATAGA
AGCATACAAAGTGGAAATATCAAACCTCCGCACTGATCTAGAGCAATCAAGGCAAAAGGA
GCTTGAATTAGAAACGGTGAAAGCTACCGTGGAAGCCTTAGAAATAGAACATAAAGCAGC
TACCACAGAACAAGAGGAAAAACTCGTATTAGTTACTAACGAATTAAGAGAAGTGAAAGA
AACATTAGAAAAGGTTAATCATGAAAAAGCAGAAAAAGATTTGGAATTAAGTAGGGTTAA
GGAAGAGTTAATTGGACATCGGGAGAAAAGTGGAGATGAATATAAAAAAGTAGTGGAAGA
AAAAGAATTGGCCTTAAAAAGTATTGCTGAATTGAAAGAGGAACATTTACGGGAGAAAGA
GGAATTAACACAATCTACTCGTGAGTACATAGAAAAACTAGTAAATGAAGTAAGTAATTT
GCAACGCCAATTGAATGATAAGGAGACTGATTATGTAAATAACTGTGATAATCTAAATGC
AGACTTCACAGTGAAAATGAAAGAATTTGAGGAAATTATTATGAATAAGGATATAGAAAT
ACAAGAAACATTGTATAAACAGACATTATTGCAAACTGAATTAGAAAATACAAAAATTTC
TTATAATGAAAGACTTTTAGAACAAACTAAAGAAATAGAAAGGTTAGACGCAATAGTTGG
GGAATACAAAACCACAGCTGCAGCCCTAAGAGCTGAAAGAGAAGATATACAAATTAAGTT
AGAAGAAAAATTATTACAGTTAAGTGATATCGAAACTGCTATTGTGAAACTAGAGAATGA
TAAAAACCAAGAAATTTCAGAACTTAAGGAGGAATTAGAAATGAAAATTACTGATAAAAA
TAATGAGTGTTCAGAATTACGTAAATTTTTGGCAGAGAAATCTGAATTAAACGATCGCCA
AATTTCTGACAGCGAACTTTTAATGGCAAAAATTACAGAATTTGAGACGCTCATTTCGTA
CAAAAACAATGAAATCGACGCTCTTAATTTACGGTTGAAAGAAGCTATATTCAATGCAGA
GCAGCAAAAAAATAATTACGAAGAACAATTGAAAGAAAATAAATACGATATATCTTTACT
GAATGATAAGCTTCAAAACTTAGTCGTCTGTAAAGATGAAATTATTAATAACATGAAAAG
TATGATAGCTGAAAAAGATGAACAAGTTATAGCTCTAAATGTAGAATTAACAAAAATATC
TGAAGATTCCATTCGATTAAAAGAAGAACTGGTTGAGACACAAGCAGAACTAGAAATTGG
GAACAATGAACTCGTGACATTAAGGGATGAGCATGAATCCATAACTGCTAGAAATGAAAG
TAATTTGATACTGAAAAATAAGGAACTGAGAAACCTTCATGATGAAATAAACAATTTAAA
TCAACAAAAGAACGAACTCGAAAGCGAAAAGGAAAAAATCATCATCGAATTAGCTGCAGA
GAAACAGGTCTACGAAGATAATGTCAAGGGACTTAACGAAACACATGAAAAATTACGACA
AGAATATGAATTTGTCAAAAACGAACAAGAAACATTAACTGCGAAGTTTACTGATGAAAT
TAACAGACTAGTATCCGAATATGATGATGTTAAAGTCGAAAAAGATGATGAAATAAAACA
ACTGACACATAAAATTACAGCATTGGAATTAAATTTAAATGAAGAAATGAAAAAGAGAGA
TGTGAAAATTTTGGAGGATGAGAAGGAAATTGTAGCACTAAAGTTAGAATTGGACGATTT
ACAGAAATCAATGGTAATGGAAAAGGAGAGCGTGGAATGTACTTTAGCAAAAATAGCCAG
AGAGAAACAGTTACTCGAAGCGAGATTAGAATACGCCGAAGAAAAACGATTGAACGCGGA
GTGTGAATTGCAGGATTTATTGCAACATAATTCGGAACTCGAAGCTAATTTGGTAACTCT
AAGGAAGCAGCTAGAAGAAACGCAGAATGAACTAGAAAAACAAAAGTCAAAATTAGTATC
CTGTGCTGGTGAAGCAGCTTTGGAAGTTACGAACGAAGCGTTAGCAGCGCTTGAGCGGTC
CAATGCACAAGACACTAACAAAGTAGTTGCTGCATTAGCCGCTAAGGCACTGGAGGAACT
TACGAGGCATAGTCAGATAAAGGGCAATGAACAGACAGTGGCTCGATCAGCAATATACGC
AGCACATAATACGGCGCAACTGTCCTCTTACGTCATAGAAGTTTCAAACATATCTACAAA
CATGGAATTGGCTGACAAACTGCACAACGAATGTCGAACGATGCTGACGTCGACAAAACA
ATGTCTGGAGTCGCTGAAAGACGGATCGATACCGAACTCTGAGTGCGTTGAAACGAAACG
TCTGGTGGAGCGGGTAGCTAGTGCTGCGGCCGCGGCCGACACCGGCAACAGCGCCGGCAG
GAGCGTCGACGACGAACTGGCCGACATGGACACGGCTATCGAACAAGCGGCCTCGCAAAT
CGAAGAGTTACTGGCGGCCAGTAGAGCTGGTGATTCTGGCGTGAAACTCGAGGTGAACAG
TAAAATATTGGACGCCTGCACCACACTGATGGGCGCCGTCAAGATCCTCGTACAAGACGC
AAGGAAACTGCAAAACGAACTCGGCGATCCCAAGACGCGCCAGAAGATGTACAGAAAGAA
CCCGCAGTGGTCGGAAGGATTAATATCCGCAGCCAAAGCTGTTGTTTTCGCAGCCAAATT
ACTCGTTACGTCGGCTGACGAGGCGGTGGGTGCGGCCGGACGCGTGGAGGGCGTGTCGGC
GGCGGCGCACGAGGTCGCCGGCAGCACGGCGCAGCTGGTGGCGGCGTCCCGCGCCCGCGC
G
(4681 bp)

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