SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30319_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_receptor_corepressor_1_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016604 C nuclear body
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0042826 F histone deacetylase binding
GO:0044255 P cellular lipid metabolic process
GO:0047485 F protein N-terminus binding
GO:0072365 P obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter
GO:1903799 P negative regulation of production of miRNAs involved in gene silencing by miRNA
Transcript
Level		FPKM:0.10 TPM:0.10
ORF EntryO_SariMG15545_internal:A_SariMG_comp30319_c0_seq2
Sequence
(Nucleotide)
GGGTCGTATCAACCCCCCTCGGTGTTCGTATCAACTCCGGCCTGAGTAGTGGTAGGGAGG
TAGGTGCGGCCGAGGGCAGCGGCACGCAGGAGGGCTCCGGCGCAAGCGGCAGCGGCACTG
ACACCGGGGGCGGAGCCACCTCCATCCCCTCGAGCCCCGGCCCCAGCACCAGCACTCCGC
CCTCCTCCGCGTTCGGTTCTTTCGCATCCGCGCATCTACCTGATGTACCCTGTGATCTCT
GCAGACGCGTAGTGACGCCAGCGGGCAGGTCCGGGTCGGGCGCCGGCCGCGGCGGGTTCC
GCGTCGAGCGTCTCTGCCGGGGCTTGCGGAGCAGCTGCTTGTAGTTCTCACACTTCTTAG
ACAGGTAGTAAAATCTAACGCAATCCTTGACGTTCTTCCTCGGTAGAAAGGAAGCGATCG
TGCCGAAGTTCTTCGGATGCTGGAGGTACTTCTCCCGGAAGAGTTCGCGCTCCCCCTGCG
ACCACACGTTCCGGAGTTGCAGCTCTTTGTGCTCCGATTTCATGTCTAGGCATCGACGGT
TAGTGTCGATGTATATCGGCGTGGTGTCGGCCGGGTCCCGCAGCAGCGGCGGCACGACCG
TCAGCGAGCGCATCTTCTTGTCCTCGTGCTCCTGCTCGTGCAGCCCGTCCGCTATCTCCT
CGAGCTCCGCCTCGGACTTGACGCGCGCGCCGAGCCGGTTGAACCGCTCGCGCTCCTCGC
GCTGCTTCCTCAGCTCGGGGAACACCTTCTCAAAAAACTCCCTGTTCTTCGCGTCCTTGG
CTTTTCTCTTCTGGCTTTGTTCTATCCTCTCGACTCTGCGAGCCCATTCCGCTGCTCTCC
TGCTATACTCATCAGCGAGGGCATCTTCGCGCTTCTCTGCTATCTCTTTAACGATACGTA
TGTGTTCGAGTAGCCTCGTCCGGAATGTCCGGTTCGTCCGAATGTTCTCGTGGTACTGTT
CCGTGTCCTGCGGCTGGTTGTACAGCGGGTACAGCACCTCCGGACCGAGGTGCGTCAGGG
AACCGTGCGCGGCAGCCGCCTTTTTCCTATTTTCAGCATATATACAATGAGCGAGGCTCC
GATGCCTCGAGGGCACTTCTTCAGGCTCCTCAGCCCTGGCAGGCTTCGACGCGGTCTGTT
CCAGCTCCACTTGCTTTTTTTTCAGCTGCGCCAGAGACGACTCCGCCAGAGCCATCTCGC
GGTCCACCTTAGATATCTGTTGCAATAGATCATCTTTAGTGGTCCTGAGGGCTTGGTCCT
CGACGGTGGGTTCCGACGGCGGGTTCGGCGACAGAACTTCCACCGTGTTATACACATTCA
CCGGCTCTCTCGTATCGACTCTAAGTTGCTGGTGGTGTGGTATCGGTCTGATCGACATCG
GCTCCGGCATGAGGCAGACTTTCTTGAAGGGTGGCGGGTCGGCCGGGGGCGGGTGGTGTA
CAGAAGGCGCGGGGGGCGGCAGGTACGACGTACCCAACAAGGACATTCGGGCACCCTTCC
GCCTGTACTCGCTAACGGCGCCTCCGCCCCGTCCATAGCTGCCCTCCCTGTATGAGAGCG
CAGCGGATCCATAACCAGGTTGGTGTAGCCGCAACTGAGCTGGCGGGTAGGGCTGTGGGG
CGTAGGGAGCGGCAGGCGGCTGGCGGGGCTGTGCCGGCGCCACCCCAACCGGCTTGCCGC
CGTACGCCAGAGCGCCGCCGGCGTGCCCGGGGTACGCCG
(1719 bp)

- SilkBase 1999-2023 -