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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30313_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nipped-B-like_protein_A_[Bombyx_mori]
Ontology
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
Transcript
Level		FPKM:4.51 TPM:4.52
ORF EntryO_SariMG15516_complete:A_SariMG_comp30313_c0_seq3
Sequence
(Nucleotide)
GTAATATAAAAAAAATTAATACTTTTTAATCTAACTATGTAAATTTAATGTTCTGTAATA
TTGTATAAAATAATAATTATTTATAAATAAAAATGCACTTATTTTAACAGACCAGAGCCT
CGGGAAAGCTCCTGACAAAAATCTATACAAAGTTATAATTGTTCCTCTCGACGCTCCTTG
TGCGTGAAGCGCAGTCCGAGAATTCAGTTAATCACGTTCCTACTAACGAATTGATATCGG
AACGTTTTAATAATTCAAATCAGGGTAGGGTGTACATATACTTTATATTCTTCATACAAA
TTATCTACACACAAGACTTTTAATAATAATAAAAATATATATTTATATATATATATAAAT
CTGAGTTTTTTTTTTTTTCAAATCAAACTCGTATAAAGAAATTATAATTGCCGGGAAGCG
TACGTACGTAAGTCGGGGCGGCGGGACCGTCCATGTAATATTATATACAGGGGGTGTCCG
GCGACGCGGTCCCGCCGTAGACCTCGGACGAATAATAAATTAACCCAATCGAGAGGAAAA
TTATCAGATCCACCGAGCGCGACGCGACGCGACGAGACGCGGACCCGCGCGGCCATTCAT
CACATTATAGTGTCCGTTGTTTCGGGTGTCGTGGCGGTTGCGGTGGCGGTGGCGGCACTC
ACTCCATGTGTCGGTCCAGAAGCACTGCACACACGCACGCACGCGCATCATAAACACGCA
CACAACACACACACAAAGAGAGGCGGTCCGCCTTATCGCACGACTCCGGCACGCTCTGTC
CGCGGCACCGCGGTCTCGGGGGCGAGGCAGCGCGGGCGGCGGGGGGGCGGCGGCTCGCGT
CGCTACGTACCGCCCGCCGGTTGCTGTGGCGCGCCCGCCGGCACCGGTGCGCTCGACGCG
CCGCTCGACGTACCGCTCGGCGCACCAGCACCACCGACACCCGGCGTCTCCTCATCCTCC
TCCTCCTCGGGGTCGAATTTCAACATCAGCTGCTTAAACTCGAGGTAGTCGTCGACGAGC
CTCCGGCGGCCGCGCGCGTCGAGCTCCTCGTCGCGCTCCTCCTGCAGCAGCTGCGCGATG
GTCGCCTTCGGCTCGAACACCGGCGCGAGCCGCCGGGAGATCGCTTTCTCATACACTTTC
ACGCTCTCGGACGGCGAGTACTGGTTAATTTTCGCATCAGTAAGACCGTAGAGCTGCTTC
AGATGCTGCTTGAGTACGAGTAAGAGTAAACAGCCCCGCGCTTGCTGCATCGCGTCGCGC
AAAGGCCGCGTCGACTCAGGCACTCGCGCCACCAGTGTCTCGGCTTCCTCCTCTTCGTCT
TCTTCTTCCTCGAGTGGCTCCTTCTCTTCGCTACCTGTTTTGTTCAATCCCTCCCGAAAA
AGCTGCAACAGGTTCGAACCCGACGTCGATATAATAATATCTATGTGGTGTATTATAAAT
AACGGTTCGTCCTGCACTTGGTACGGGAAGTAGCTTAAATTGTCAGCTAGATACAGCATT
TGGTCCAGTGGAGCAGTAGAAACATCGTCAAACTGTTTCAATAGAGATAGAACTAAAGCT
CTCCGCTGCGGCCGCGTGTTCCTCAATAACGAATACAGAAACCCATTCAATGACGTCGGT
AGATCATCTTGTTCCTTTTTCCTAAACCCTCTTATAACACCATTCCCTATGTCGGATTGC
AATATTTTTTGCAGCTGATACGAGAGTTTTATTCCAAGTTGAGCTTTCATGTGGATAAAC
CCTGGGTATTTCTTATCGATCTCCTGCAGGTGTTTGTCAGCCGTGTGCGATACTGTCACT
TCAATATCTGTGCTCATACTTATCAGATATGGAACGATCTGTACAGGATGGACGAGACCT
TGTGAGAGCACAAGCTGGACGACCTTCATAGCGGCCGACCGTACTACTGTACTCGGATGT
AAAGAAGACCCAAGTATCTCCTTCAAGTACAGCTGGATCACAGTCGATGCCATCCCGGAC
GATACGTCGCCCATCTCTTTGAGGTTCTCGTGCTTCGACCGCTTTGACCATTCTTTATCC
TGCCTGATCATCCTCTGTTCTTCCTCTTGTAAGTACATTTCGATGTTTCTCAGTACGTCC
GCTTTCATTTCTATCGGGGCTAAGTCCGATGTTAAAAGTTGATGGTAGAACTCTTTCAGC
TCCGGCCTTAACATAAACTCATAGTGTCGTACGCAAACTGAACCTAGCGCTTTCAGCGTA
TGAGAGACAAAATCTTCATCCTCCAATCCAACAAAAAACATTAACGTTGAGTAAACTTGT
TCCTTAATATCATTCGGAAGACCTTCTATTACTTTAGGGTCGATGAAGTCAAAGTAACGT
AATAATAGACCTACTATAAATAACGCTCGACGAAAATATGGACGGGACAGTAACCCTCTT
GTCATTTCAGGGTTACGTTGCCAACTGTGTTTCCACTGAAGTAATACTCCGTGATATTTA
TTGAATACGTCTCTGATGAGCTTGTAGTTATGAGTCAGGTTGTTGACGATAGCCGCGAGG
CAGGCGATGCACGATGCTATCACGAGTTGACCCCGTTGGAGTATCAGTTTCACCGCGTCC
TCTTCTAATTGTGCCAAGAACACTTCACTCGGATGCTCCATCAGAGGCACTACCAGTTCT
AACGTCGATGCTACCGTAGACATTATCTGCTGTTCATATTGATTCTGACATTTCAAACTG
AGATACGGTTGCAGTGTCAATGCGTGATTAACTAATAATTGAGGCCTAATTTTCGCAAAT
AAATGTAACGTAGAAAGACAAGCTAATATGCGTTGTGACGACCCGGTACCTTCTAAACTT
GTCTCTTCCAGTTGTAATAAACTTTCTACGAGGCAGTCGACAATTTGTTGACAAGCGACT
AATAAAGATTTGGGCGGTTGATATATTATTTTAGTAGAATCGTCTTTATCTTCTTTAGGT
TTAAAAAGACTCATCAGTAACTGTTGAAACCACTCGAGGCCCATATCCCTCGAGGATATT
ACAACGTCGGTTATGTTAAGGACTTTTCTAGTGAGAGGATCTGCGGCCGCGTCCGTCATA
TCGAGAGCACCAGGCCTTGTCGTGTTGGGACACGGGCTAAACCACATATTCTGAAACACT
TCCATTACCAATTTCCTTATACCCTCTTCATCGTTAACACGCCTGATCATTTTAACACAT
ATTTCAGGTATCTTAGGGAACTCCGGACAATCGATACATATATCTTTTAGAATTTTTATC
ACACGTTTTCGAACTGAAACTCCCGTATCTAATATCCTATTCGATAGCATTCCATAATAT
TTATCGATAAGATCGTGTCGGCTCAAGACGAATTTCCCTACTAAATCGACCGCAGCCTCC
CTCACTGCAGTTGATTGATCAAGGAACGATCTATTTACACCTATCTGCATGTCCGGTCGT
GCGAGCACTGAAGGGTCCGCTTCCACAATCATCGCTAGGCACTTCATCGCTTTGGTGCGA
ATCGCTATTGTATTTTCACATAAAATTACTAAAATCTTCCTCAGATATCTATCGAAACTT
TGCGAGAACGACCTTTTAGAGGCCAAATATTGCGATATAAGTTCCGCACCGCTATAATCT
ATGTATGATTGCATCACTTGTACTTGTGTACCGCCTTGGTACCGGAACGGCCTAATCTTC
TCTAGAAAGAAATGTTTACGTCGCTCTATGGTCTTGAACTTTTCAGCAGAAATGATAGCG
CTCAGGTTGTGTCTCTTGTCCGCTTTAGAATCCTTTATAGCACCGTCGCTGTCCTCGTCC
AGATCGGATTCTTCTTCGCTCGAGTCATCTTTGTGTCTCTTCTTCGATTTGTTCTTCGTT
TTCTTCGTTGGCGATGTACTCTTCGGTTGGATCACCATGTCTCTGTACCACTGAGTGATA
TAAAAATGCCGGGCGCAGTTCCAGGCTTGATCTTTTTGCCCGTTGATTGCAAGGTAGTCT
AGTAAAACTCGTTGAAGGAATTCTGTTCTTTGTTCGTCTTCATCGAGACCGGACGTGATA
CTCTGCGCCTGATTGCCATCTTTTTCCTCCTCCGCACGAATATCTCTGACAACAGCGTCC
ATAGTGGCCAGTTTAGCACGAGAGTGCACACTATCACGCCGCAATCTAGCCGCTACCAGA
CCTAAATATTCTAAGGACGCTACACGTACTGACATTTCCATCGATTTATCAGACATGTAT
TTTACCAACATAGTTCCTAGTAAGCTCAGAAGCAATTCGGTCGCAGGCCACTCTGGTTTA
TTGACCGTAGTAAGGAGGTCGTGTACGAAGTTTTCAAACAGCGGCCTAAAGTCGACCTCC
TCGGAACGACTTCGGCACTTATTCAGGAATGACGTCAGGAATGTACCACCTACGCTAATT
GCCGCTTCATACTTAGATATTATAAGGAGATCTTTATCTACGCATTTTTTATTTTCAGAA
GTATCGGCATGTTCTCTGTCTTTATCCTTGTCCTGAGACTTGCATAGTGTTTCAGGTAAA
GTGACTACACATTGTACGAGTTGTAAAACAAGTGCCGTTAACATTTGTATGTGTTGATCT
GAATTTAATTGAAACGATCGCAAGTTGTGCTTCGAACTCGGTATACGTGCAATCGATGCC
AGTATATCTTCTAACAGAAGGCGCCGGTGTTGTTCGTACTTGGTAAAAATCGTTGTAACT
AGTTTCAACGCGGCCAGTTGTAGTTCACTGACGTTTTCAACGAAGAACGGCGAAACGCCG
ACCGTTGAGGCGTGTAACACCGTGGTGTCGGTGAGATGGTGCGCCGCGAACAACTCGGCG
AGGAGCGTGACGCACTCGTGCGCGTGAGTGTACAGCTCCTTCACTCCACGGGTCGAGCCT
CCGGATCGCCTCGTGGCGTTACCTGCCCCACCGCCCCGGCGTTTCCTTCCGTCCACTTTC
TTTTTAGATGTGGTCTGAATACTGTAAACGGGATCGTAAACACAGTATATACTATTGTTC
AACTGGAATTTTATGAACATAATAATTCTGTCTATGACATCTTCTAAAAATATGCGCTTA
GGCATACTGGGTGACGTCATTATGTACAAGGATGTAAGGGATGCGTCCGATGCACACATA
ACTCTCTCTAACGCAGAGTCTATCCATATCTGTCTCATTTCCTCGCTATCTTCAGGATCT
CCCAACAATGACATTTTCTCTGCCGCTCTAATATTCTTTTCCAATATAGTTAATAATCTG
ACTAATCTGTCAGATGGTATTGCTTCCATAGCACCAAGGTTCTTTAACTTAGCTGCTTCT
GCACATAATTCTTGCAACTGATAACGTGGTAGTAATAATTCTTCTGGTATATCAGTACCT
TCCATTTCATCGGTTATTATGACGTCGTCATCGATAGTCTCAAAAACTGATTCGATCAAT
TTATTGAAACGTTGATACGTATTTGTTTCCATTAGTTCGTCTACTGACAGCATTTCCAAA
ACTGGCACCAAACGTCGCTCTACTTTCCGAAGTTTAGGTCGTACGATCGCAGCTTCCGCT
TCCTCTTTCTTACTAGCTTCTTCATGTTTCCTTTTTACAGCTTCCCAGTTTTTCTCTCTA
GCTATGTCTATTGCTTCTCTTTCTTTATCTACACTGGGGGCCATTTAAGCATATTGTTAT
C
(5641 bp)

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