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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30313_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nipped-B-like_protein_A_[Bombyx_mori]
Ontology
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
Transcript
Level		FPKM:0.50 TPM:0.51
ORF EntryO_SariMG15513_complete:A_SariMG_comp30313_c0_seq2
Sequence
(Nucleotide)
GTAATATAAAAAAAATTAATACTTTTTAATCTAACTATGTAAATTTAATGTTCTGTAATA
TTGTATAAAATAATAATTATTTATAAATAAAAATGCACTTATTTTAACAGACCAGAGCCT
CGGGAAAGCTCCTGACAAAAATCTATACAAAGTTATAATTGTTCCTCTCGACGCTCCTTG
TGCGTGAAGCGCAGTCCGAGAATTCAGTTAATCACGTTCCTACTAACGAATTGATATCGG
AACGTTTTAATAATTCAAATCAGGGTAGGGTGTACATATACTTTATATTCTTCATACAAA
TTATCTACACACAAGACTTTTAATAATAATAAAAATATATATTTATATATATATATAAAT
CTGAGTTTTTTTTTTTTTCAAATCAAACTCGTATAAAGAAATTATAATTGCCGGGAAGCG
TACGTACGTAAGTCGGGGCGGCGGGACCGTCCATGTAATATTATATACAGGGGGTGTCCG
GCGACGCGGTCCCGCCGTAGACCTCGGACGAATAATAAATTAACCCAATCGAGAGGAAAA
TTATCAGATCCACCGAGCGCGACGCGACGCGACGAGACGCGGACCCGCGCGGCCATTCAT
CACATTATAGTGTCCGTTGTTTCGGGTGTCGTGGCGGTTGCGGTGGCGGTGGCGGCACTC
ACTCCATGTGTCGGTCCAGAAGCACGCCCGCCGGTTGCTGTGGCGCGCCCGCCGGCACCG
GTGCGCTCGACGCGCCGCTCGACGTACCGCTCGGCGCACCAGCACCACCGACACCCGGCG
TCTCCTCATCCTCCTCCTCCTCGGGGTCGAATTTCAACATCAGCTGCTTAAACTCGAGGT
AGTCGTCGACGAGCCTCCGGCGGCCGCGCGCGTCGAGCTCCTCGTCGCGCTCCTCCTGCA
GCAGCTGCGCGATGGTCGCCTTCGGCTCGAACACCGGCGCGAGCCGCCGGGAGATCGCTT
TCTCATACACTTTCACGCTCTCGGACGGCGAGTACTGGTTAATTTTCGCATCAGTAAGAC
CGTAGAGCTGCTTCAGATGCTGCTTGAGTACGAGTAAGAGTAAACAGCCCCGCGCTTGCT
GCATCGCGTCGCGCAAAGGCCGCGTCGACTCAGGCACTCGCGCCACCAGTGTCTCGGCTT
CCTCCTCTTCGTCTTCTTCTTCCTCGAGTGGCTCCTTCTCTTCGCTACCTGTTTTGTTCA
ATCCCTCCCGAAAAAGCTGCAACAGGTTCGAACCCGACGTCGATATAATAATATCTATGT
GGTGTATTATAAATAACGGTTCGTCCTGCACTTGGTACGGGAAGTAGCTTAAATTGTCAG
CTAGATACAGCATTTGGTCCAGTGGAGCAGTAGAAACATCGTCAAACTGTTTCAATAGAG
ATAGAACTAAAGCTCTCCGCTGCGGCCGCGTGTTCCTCAATAACGAATACAGAAACCCAT
TCAATGACGTCGGTAGATCATCTTGTTCCTTTTTCCTAAACCCTCTTATAACACCATTCC
CTATGTCGGATTGCAATATTTTTTGCAGCTGATACGAGAGTTTTATTCCAAGTTGAGCTT
TCATGTGGATAAACCCTGGGTATTTCTTATCGATCTCCTGCAGGTGTTTGTCAGCCGTGT
GCGATACTGTCACTTCAATATCTGTGCTCATACTTATCAGATATGGAACGATCTGTACAG
GATGGACGAGACCTTGTGAGAGCACAAGCTGGACGACCTTCATAGCGGCCGACCGTACTA
CTGTACTCGGATGTAAAGAAGACCCAAGTATCTCCTTCAAGTACAGCTGGATCACAGTCG
ATGCCATCCCGGACGATACGTCGCCCATCTCTTTGAGGTTCTCGTGCTTCGACCGCTTTG
ACCATTCTTTATCCTGCCTGATCATCCTCTGTTCTTCCTCTTGTAAGTACATTTCGATGT
TTCTCAGTACGTCCGCTTTCATTTCTATCGGGGCTAAGTCCGATGTTAAAAGTTGATGGT
AGAACTCTTTCAGCTCCGGCCTTAACATAAACTCATAGTGTCGTACGCAAACTGAACCTA
GCGCTTTCAGCGTATGAGAGACAAAATCTTCATCCTCCAATCCAACAAAAAACATTAACG
TTGAGTAAACTTGTTCCTTAATATCATTCGGAAGACCTTCTATTACTTTAGGGTCGATGA
AGTCAAAGTAACGTAATAATAGACCTACTATAAATAACGCTCGACGAAAATATGGACGGG
ACAGTAACCCTCTTGTCATTTCAGGGTTACGTTGCCAACTGTGTTTCCACTGAAGTAATA
CTCCGTGATATTTATTGAATACGTCTCTGATGAGCTTGTAGTTATGAGTCAGGTTGTTGA
CGATAGCCGCGAGGCAGGCGATGCACGATGCTATCACGAGTTGACCCCGTTGGAGTATCA
GTTTCACCGCGTCCTCTTCTAATTGTGCCAAGAACACTTCACTCGGATGCTCCATCAGAG
GCACTACCAGTTCTAACGTCGATGCTACCGTAGACATTATCTGCTGTTCATATTGATTCT
GACATTTCAAACTGAGATACGGTTGCAGTGTCAATGCGTGATTAACTAATAATTGAGGCC
TAATTTTCGCAAATAAATGTAACGTAGAAAGACAAGCTAATATGCGTTGTGACGACCCGG
TACCTTCTAAACTTGTCTCTTCCAGTTGTAATAAACTTTCTACGAGGCAGTCGACAATTT
GTTGACAAGCGACTAATAAAGATTTGGGCGGTTGATATATTATTTTAGTAGAATCGTCTT
TATCTTCTTTAGGTTTAAAAAGACTCATCAGTAACTGTTGAAACCACTCGAGGCCCATAT
CCCTCGAGGATATTACAACGTCGGTTATGTTAAGGACTTTTCTAGTGAGAGGATCTGCGG
CCGCGTCCGTCATATCGAGAGCACCAGGCCTTGTCGTGTTGGGACACGGGCTAAACCACA
TATTCTGAAACACTTCCATTACCAATTTCCTTATACCCTCTTCATCGTTAACACGCCTGA
TCATTTTAACACATATTTCAGGTATCTTAGGGAACTCCGGACAATCGATACATATATCTT
TTAGAATTTTTATCACACGTTTTCGAACTGAAACTCCCGTATCTAATATCCTATTCGATA
GCATTCCATAATATTTATCGATAAGATCGTGTCGGCTCAAGACGAATTTCCCTACTAAAT
CGACCGCAGCCTCCCTCACTGCAGTTGATTGATCAAGGAACGATCTATTTACACCTATCT
GCATGTCCGGTCGTGCGAGCACTGAAGGGTCCGCTTCCACAATCATCGCTAGGCACTTCA
TCGCTTTGGTGCGAATCGCTATTGTATTTTCACATAAAATTACTAAAATCTTCCTCAGAT
ATCTATCGAAACTTTGCGAGAACGACCTTTTAGAGGCCAAATATTGCGATATAAGTTCCG
CACCGCTATAATCTATGTATGATTGCATCACTTGTACTTGTGTACCGCCTTGGTACCGGA
ACGGCCTAATCTTCTCTAGAAAGAAATGTTTACGTCGCTCTATGGTCTTGAACTTTTCAG
CAGAAATGATAGCGCTCAGGTTGTGTCTCTTGTCCGCTTTAGAATCCTTTATAGCACCGT
CGCTGTCCTCGTCCAGATCGGATTCTTCTTCGCTCGAGTCATCTTTGTGTCTCTTCTTCG
ATTTGTTCTTCGTTTTCTTCGTTGGCGATGTACTCTTCGGTTGGATCACCATGTCTCTGT
ACCACTGAGTGATATAAAAATGCCGGGCGCAGTTCCAGGCTTGATCTTTTTGCCCGTTGA
TTGCAAGGTAGTCTAGTAAAACTCGTTGAAGGAATTCTGTTCTTTGTTCGTCTTCATCGA
GACCGGACGTGATACTCTGCGCCTGATTGCCATCTTTTTCCTCCTCCGCACGAATATCTC
TGACAACAGCGTCCATAGTGGCCAGTTTAGCACGAGAGTGCACACTATCACGCCGCAATC
TAGCCGCTACCAGACCTAAATATTCTAAGGACGCTACACGTACTGACATTTCCATCGATT
TATCAGACATGTATTTTACCAACATAGTTCCTAGTAAGCTCAGAAGCAATTCGGTCGCAG
GCCACTCTGGTTTATTGACCGTAGTAAGGAGGTCGTGTACGAAGTTTTCAAACAGCGGCC
TAAAGTCGACCTCCTCGGAACGACTTCGGCACTTATTCAGGAATGACGTCAGGAATGTAC
CACCTACGCTAATTGCCGCTTCATACTTAGATATTATAAGGAGATCTTTATCTACGCATT
TTTTATTTTCAGAAGTATCGGCATGTTCTCTGTCTTTATCCTTGTCCTGAGACTTGCATA
GTGTTTCAGGTAAAGTGACTACACATTGTACGAGTTGTAAAACAAGTGCCGTTAACATTT
GTATGTGTTGATCTGAATTTAATTGAAACGATCGCAAGTTGTGCTTCGAACTCGGTATAC
GTGCAATCGATGCCAGTATATCTTCTAACAGAAGGCGCCGGTGTTGTTCGTACTTGGTAA
AAATCGTTGTAACTAGTTTCAACGCGGCCAGTTGTAGTTCACTGACGTTTTCAACGAAGA
ACGGCGAAACGCCGACCGTTGAGGCGTGTAACACCGTGGTGTCGGTGAGATGGTGCGCCG
CGAACAACTCGGCGAGGAGCGTGACGCACTCGTGCGCGTGAGTGTACAGCTCCTTCACTC
CACGGGTCGAGCCTCCGGATCGCCTCGTGGCGTTACCTGCCCCACCGCCCCGGCGTTTCC
TTCCGTCCACTTTCTTTTTAGATGTGGTCTGAATACTGTAAACGGGATCGTAAACACAGT
ATATACTATTGTTCAACTGGAATTTTATGAACATAATAATTCTGTCTATGACATCTTCTA
AAAATATGCGCTTAGGCATACTGGGTGACGTCATTATGTACAAGGATGTAAGGGATGCGT
CCGATGCACACATAACTCTCTCTAACGCAGAGTCTATCCATATCTGTCTCATTTCCTCGC
TATCTTCAGGATCTCCCAACAATGACATTTTCTCTGCCGCTCTAATATTCTTTTCCAATA
TAGTTAATAATCTGACTAATCTGTCAGATGGTATTGCTTCCATAGCACCAAGGTTCTTTA
ACTTAGCTGCTTCTGCACATAATTCTTGCAACTGATAACGTGGTAGTAATAATTCTTCTG
GTATATCAGTACCTTCCATTTCATCGGTTATTATGACGTCGTCATCGATAGTCTCAAAAA
CTGATTCGATCAATTTATTGAAACGTTGATACGTATTTGTTTCCATTAGTTCGTCTACTG
ACAGCATTTCCAAAACTGGCACCAAACGTCGCTCTACTTTCCGAAGTTTAGGTCGTACGA
TCGCAGCTTCCGCTTCCTCTTTCTTACTAGCTTCTTCATGTTTCCTTTTTACAGCTTCCC
AGTTTTTCTCTCTAGCTATGTCTATTGCTTCTCTTTCTTTATCTACACTGGGGGCCATTT
AAGCATATTGTTATC
(5475 bp)

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