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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30251_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_serine/threonine-protein_kinase_tsuA_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0031297 P replication fork processing
GO:0031933 C obsolete telomeric heterochromatin
GO:0032206 P positive regulation of telomere maintenance
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070603 C SWI/SNF superfamily-type complex
GO:0072711 P cellular response to hydroxyurea
GO:1901581 P negative regulation of telomeric RNA transcription from RNA pol II promoter
Transcript
Level		FPKM:2.62 TPM:2.62
ORF EntryO_SariMG15171_complete:A_SariMG_comp30251_c0_seq1
Sequence
(Nucleotide)
ATAGCGTAAACATAGTTCATATGTTGTTTGTATTTGATGTTATTTTTTGAACTATTAAAA
CAAACAAAATTCTTTCATAATGGGCGATACTGCTAACAACGATGGTACTTCCACTGAGAC
GGATCAGCCGGCTTCAGAAAGTAACGAGGAGAAATTCCCGCCATTTCCTGAACCTACAGA
TCAGGATTTTGAGGATGATGTTCCGGAAGATGAAAGAAACTATTTTAAAACTAAGTTCCC
AGATTTGAACGCTGTTAAGTATATGCGGTTACATTGTACGGCGTGTGATCGTCACTTAGG
TTCTTCAGCTCGGAACATTAACCGTATGCGTGCTCATCCCATGTTACGTACTCTAGTATG
TCATACATGCCATACGTTTTATAACAGTGGTGAATTTGAAAAAGGAGATGATGGATCAGA
ATTGTATTGTCGTTGGTGTGGTCAAGGAGGTCAAGTTTATTGCTGCTCTGACTGTCCTCA
TGTATTTTGTGCGAAATGCATTAAAAGGAATATGGGTCCATCGAAAATAAAGGAAATTGA
GAATGCTGATGATTGGAAATGTTTCAAATGCCGGCCCGAATCTCTGAAAGATATTCGTGC
TGTTTGTTGGGCGCTACTGCGATACTGTGATTTAAAAAATGAAATGACATACAAAACTGA
AGATTTAAAAATGCGAGAAATATTTCAAAAAGAGTGTGGACAAGATTACACTGAATGCTG
TAAAAGTAGAAATCGAAAGAGGGAGAAACCGGAAGTTCAAAAGAAAAAAGAAGAAAAAAA
AGATGTTGAAAAGCCAACAACAACTACAATTATATCTAAAATCCCATCTACCATACAGGT
TAAAAAATTTGCCTCAATCAACATTGATGATCAGAACATTGTGACAACGCCAAAAGTTGA
GAAGAAACCGGTAAAGAGATCAGGAAGTCCAAAGCAGAAGGCGGTTTTAATAAAAAATCC
ACCCGTGATGGCCGCATCTCCAAGATTATTAAATCCTGTTGTATATCCACCACCAATGAA
GAAAATCAAGATGACAAATAATATTATAAATGCAAATGTTAGATTTGTTAATGATAGCAG
ATTTACATCTTCAATAACTCGCATTCGCCCGAGGACATACGCTCCGTCGGTTTCCACAGC
ACAAGTTATAAACAATTTTAACGGTTTCAATAATACAAGAGTCTTTAGCAACGTTCAGAA
TATGGTTGTTAATGACAATATTAATCTGTCGCTGGAAAGTTTAACACAAGGATTGGACAT
GGCAACGGTCGCTGCGATGTCTACACAAAGTAACAACGCACAGAATGACGATGTTGTGTG
CACTCCGGATTTCCCCATGGAGCCTTTATGTGAGGTAACCGAAGATAATGACGATGACGT
CCAATGTATTACTCCCGATCCGGTTAGTTTGTTCAAAATCAGTAATCCGCCGCCTCTCGT
ACCGCGCGGTAATACATTGCCCGAATTAACATCTGATAACATCATTCAGATGACTGAAAA
CGATGTCACTGTGAATTTATCGACCGGCGGACTCAAGTTCCGCGTTGACCCTCAGACACT
TTCATCTAACAAAATGTATAGGCTACCAGACGGTCGCGTGTTCGCTATAAACGCTAACCC
GAACATGCCCGGGGGCTATTCGGCTACGATAGTGGCCATCACGGAACCGGCCGGTAAAGC
TATAGGTCCTCAGGGTGCGACGTACGCTGCGAAACTGAGCGCGGTTCCGAACCCTAACGC
GTCCACGCCGTTGGAACAGAAGTCTCATAGCGAAACCCGTACTTCGTTGAGAACAAAACG
TATCGGCAACCCGACCGCTAAACGTAAATTGTCTCAGCGAAGTTCTGTTTCTAGGGAATG
CGATTTAAACGTACCCGTCGAATGGTTCAGGTACAATTTAATCGATGCCGTCGACGCGTT
AGAGTTCTCTCTTTCGCGTCTTAATAAGTTGAAGAAGGAAGCTACAACAATGTTCCTACG
AACGCGGTCATTGGGAGAAATGAAGAATTTCCATAAAACTTTAGACAGATTGTTAAACAC
GTCGTCTAAAAGATTTCAAGAGATCAAAGATAGCCTCAACAAGGAAATGAAACAGTATGT
TGCTAGAAAAATGGGCGGAAAGGTTAGCGAAGATGACGACGACGATGTAGAAATATTGCC
GGACTTGGAAAACGAAGACCCTATATTTATCGATGAGAATTCAGTAGATTCTAATACGGT
GGTTGAACATGAAAATCAAGAAATAGACTTGACGGAAATGAATAGTAGTGAGGTTAACGA
TAGTGGCGAAAAAGAAGCGACTATATCTAGAATTGAATCGAATCCGTTAAGCAATTCCGA
TCGACAGGATGAACCAGATCCGGTATCAAATGAAACGGCAACAAATATCAATGAAACTGA
TGAAACACTAAAAGAAGAGAGACGAGAACCTATATCACCGGATAAACAAAATAATGAGGA
CGCAAAAACAATTAGTTCGAGTAACGATTTAATTTGTAATGAATCTTTATTAGATAATCA
AGACGTTGATAACATGAATCGGGTAGTCGAAGATAAAAAAGTAAAAGAGAATGATTGTGA
GAACAGAAGTAATGAGAATGAAAGGGATCATGATGAGAGCGGAAATATAGAAGATGCAGT
AATGAGCGATGAACTGATTGAGAATTTGTTAAAAGACGACAGTGACGTCGATAATGTAAA
TAAAGTAAATAGTCCCGATATTACTGAACTCGAAGAAACTTAATAACATTATATAGCGGT
ATATAAGATGCGAGTTAAAAATTGTAGCTATAAAACCGATAGCCATTTCTACAAAGAAAT
CGCGTCTATTGGTAATCAGTGAAATAAAATAGACTGTTGTTTTTGTATAAGATTTTTTAT
ATAAAAGATTTTGTATTATATTATAGGGGGTCGTCCATTAATCGCGTGATGGTTTGTTGT
TTTTGTTTTCAAGTAACTTTAAACCCCCATACTCCCCCTTTGTGATATGTGTTAGGTGAG
ACTTTAGGCTAACCCTAAAGATCACGTATACTTTTCACAGAGTATCTTACAATTTTCAGA
GTATTATTTTTAAAATACAATGTAATTTAACTCTGGAAATTGTTAAATCTTTGAGTCAAG
GTCAACAAAAAAAACACACGTGCTGCTGTCTAGTAAGATAGCACTGTAGTAACATCCCAC
TTCTCCCCTTGTGATATTTTGCGATTTTTTCAATCCCAAGCTAGTTTTTTTCCCACGGTC
ACGTGATTAATGGGCAATCCTAAATGACTTGCGTATTTACAGGAAGTAGTTGTGAGTGAT
ACTAATCGTATATAGATATTGTATCTATAAAGTAAAATAAAACAATCTCGTATAAACGAT
ATATATCTGTCGAAACGCTATATTCACATAGTTTCTACGACGTAGTTGTCGTGTACCTAT
CCCAATAGAGCAGAGCAGAGAGACGAAACGGCCCGGGAGCTTCGTAATGTAAGAAATAGC
AACTCTTCATTCAAACCTTCATTCATAAAATTTATGTTTGAAAGTAACTTTGATAAACAT
TTATATAGAAATAATATTGTAGGATCTACTTCGATCTATCATCATCTTGTAATTTAATTT
CAAATGCATAGAACAGAAAATGCTGCAATCCTGACTCTAGTAACGCTTTGACAGAAAAAA
AAAGTGAATCGTCACGGAACGAAATTATTCCGTATAGAGATAATATACATAAAAGGATAG
TTTATGAAAGAAAACAAATATGGCATTATCTAAAATATTTCGGTTTTTTTTTTGTTAAAG
AAAAAGATATTTTTTTTATTTATATTAATTTAATACATAAAGTTACTTGCGCATGGCGAC
GCGTCACGGAACCGTATTAGATGTTTCATAGTCATACTATTATATAGCGTGGCTGCGCGA
CGCCACGACAAGATTTGTTTTGATCCGCCAGAAGATGTTCCACATCAAAAGTTTTTTTTC
TATATTGTGCTCTATTTATAATTATAAAAACTTATAATATATATAACAACTGAATTTGAA
ACCATAAAAAAATCATCTGCTCCCGATACTTTTTTGACTGGATGTATAATAAAAAAGTGA
AAAATAAATATGTTTAAGGAATAAACAGATTTGGCGCTTCGGGATTAATAGGATTCATTT
TACTTTGTGTTATTTTGACATTAATTACGGAACATAATTCTATGATATTCGAAAGTAGAT
GAAAATGGTTACAAATTTGTTGAGAAATAAATAATTAACAAAACTCAACGACAATATGTT
TTGTTTGTTTAGTTTATTATCAAATCCATGAATGTGTATCTATATTTTATTAAAAACGTT
TCACAAACACGAAATTTTACGCGAACGAAATCGCGGAAACGCCAAGACAATATAAAAATG
AATATTGTATTGTCGTAAAATCGATATTCAATAAATCGACGGATATCGTTTGATTTGATA
TACTCCGAGAGTTACATTACTCATTCCTAATACAGAGATAAATGTATACATTCTTGTTTC
TACTAGCCTGTGTTAAAACAGATCATAGAAATACCATACAAATTATAGTAATTTGTAATA
AAAAAACATGGCCCTTATAAAAGATTAGAAGAATTTAACCACAAACTCGATAAATAAGTT
TCTCGAATAAGCAGTATACATTACTAGCATAAATTTAATCTAAACAAATATTATTGTTTA
TCGGAGCGAATGCATTTTAGTTAATTAGCAACAGCTGAAAAAAATAAGAGGTTAAATCTG
TACAGATGGATTCAATCCATCAAATGTGCTTGAGTAAATGTGTAGTGATTATCAATTTCA
GTTAATAAGTTATTTAGCCATGAATTAAATGTGTCGTGAAACGGTTATCGGCGTTAATTC
TATTATTTACAAAACAGGACACATATACCGGAAAGCCATATTGTTATCACCGCATGGAAT
ACCTCATTTTATAAATTCCTAGTATCGGCATGACTTAGTTCTAATAGCGTGGTATCTTTT
CCACTGGACGGCTGACGCATGAAAAATCATATTCTCCATTAATCTATAAAGAGTTCTGTC
ACCATATATGGCTACCTTAAATCTTTAGGTTGTTGACTCCCGAGTGTCCAATAGTAGATC
TGTCGTTTGCTTTTGCACAATATTTTATGTTTTGTTGCAAACAAACCTGTTCAATAATAC
AATTCTGAAATAAAAGAATTTAACGATTGTAATGGAGATTTCATTGGCAGGTTCTGTTCC
TTTAATCGAGCGTTAGTTGTATAAAATTTGTGTGACATCTAAGACGTGACGTCATCAGAT
TTTAATGTT
(5289 bp)

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