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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30249_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_45_isoform_X2_[Plutella_xylostella]
Ontology
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
Transcript
Level		FPKM:7.87 TPM:7.89
ORF EntryO_SariMG15168_3prime_partial:A_SariMG_comp30249_c0_seq1
Sequence
(Nucleotide)
CGCTGCATTCGTCCTCGTCACACACGTATCGAGGAGAGAACGGACTCTGGCGAGGATACG
ATATATAGTCCCTCTGTTTCTCCGTTTCTGTGTTGAACATCTTCGGTTTCGGCACAGGTG
GCGGAGCGGGGGGTTCTACCGGGCTTTCGATCGGCACCAGCGAGGGGACAATAGGATTTT
TTGTGTTCATATCATCCTCTTGGAGTTTAAGTTTATCTAAATGGTTATCAATATCATTAA
GAGTCTTGCTTTCGGTAAGAGACTCATAACTGCTCTCCCCACTGTGTTCTAGTAGATTCC
TGCAACCCTGTACGCTGATACCGCGTGTAACTACTTCATTGCTGTAATCAGGAGCGAATG
ATATCCTCGAGACTGGCCTTTCGTATTCTCCCTTAATCGGGGAAAGCTTGTTTTGCGCAC
TCATCAAATCTAAATTAACTTCACTGGAAAACGAATCCCTGCTTAATTCTTTATCATTAA
TCGGTGAGTCGACGGTATCAACTGTCTCCGTAGAGTTGTGCTTGGTCGCTTCAGGACTGG
CCACTCCCGAGTCAGGGTTTGACACATTCTCAACAGATATAAGTGGTTTGTATTCTAATG
GTATTACGGTCGTGGAAGTCGCCATATCTATCTTGTCTTTGTCAGCGTTTTCTGGAGTGT
TGTCTGTTTTCTCCTTATCCAAGTCGACTGGGCTCGTCCTGATCGATTCTGAGCTGATAA
CTTTTTCCGAGTTGTAGCCGGATTCCATGTGGTAGGCAGCGAAATTGGCGGCTGTGTGAG
CTATAGCCTGAGAACCGACGGACGCCGAATGCGTGTCTGGTTGCCTAGGTGCATCCTCAA
GGTTATCCTCGACATCAGCATCCGACTCCGAAGAAGATTTACCCTCCTCCTTTGTGGGAC
CATTAGTTTCGGCCGGTGCCTCATCTTTTGAAGTGGAGTTACCTTTGTTTTTGCGCGCGG
CCTTTCTGGCAGCCATTCTTTCCTTCTTCAACTGATGTTTCGAAGGTTTGTTTTCCTCTT
GCGTATTGTACATATTGTCATTGGGAGTTTTCCTTCGTACAACCGCTGGTGGTTGAGGTC
TGCTTGCGGCCACAGGCAATGAGAGGTCGAGGAAGTACTCCATTCGATCGGACTGGTGCA
GGCACTCCTGACACTCCAGGGTCGAGACTAAGAAGCCCCGGAACACCTGTTCAGGCCTGA
GCATGGTGTCGGATGCTTGTTGTCCATAAAACTTGACTTTCTGCTTGACCTCACCATCCA
CTTTAGCAGGGTCCACTTTCGAGCTCATACCAAGGCTGCTCAGGATCACCGACTGATACC
GGCGAAGGTCCTCCGATCTGACAGCCTCTAATAAATGTCTTAGTAGCTCATGAGAATCAT
GCTGATCACCACCTCCAAACTGCGGCAGTTTGAGCTCTAAAGCAGACAACAACTTCCTCG
GAGTGTAAACACCACCTTCACCTGTTTGTAATTCTTCCAGAGTCTCAGCCAGTATCCGAG
TCAAAAAACTCCATTCTCCTAGTTGTCCTGTGATTGGGGGCAAATCTACTTCCTTCACTT
CTTCACTTTCTGACTTCAACTTTAACTTTCCCCCTGGTAATGTAAATCTCTCACCTGGTG
TCGCCATTTCTTGTAAAACTTGCAACAAATATGGTGTTTGAACTAAACACTGTATTACTG
AATTAAAGAAACATGTGTTTCCTAAGTTGGTCAACCCTCTAACTCGGTATAGGTTTGACA
AGTTTTTATTTTTAAATTTTAATGGATCCTTGGCTATAGTTTCTATTGTGGGTACATCTT
TAAGCTGTTCATATGGTAATTCAATTGGTGGTAAAGGTTTTATGTTTGCACCAGCCATGG
CCTGTTTCTTTAGGTATTCTATGCATTCATGAAGTTTTTTTGAAGTTGATGCAGTTACTT
CATTGTTGCAGTTATAACAGTAAACATCCCAAGTAGAAGTGTTAGTGGTGAGGGCATGGC
AGTCAGAGTGGGGTGTGTTGAAATGGTTCAAAGCGTGTTTGTTACATGTTCGTCCGCATA
ACTGCGTGCCGCAACGTAAACACATCCACAATGAAAAATCTTCTTCAAAATCGGGGTCCC
AATTATCAGTTATATTGGATTTCTTGCATTCGGCGCACTCTTTATCGAAACCTCCCGCTT
TTAAAGATTTCTTCAATCGTGTTAAATCGACTGCCTTCGCTACGTGAGGACATGCTGATT
TGACATTCTCCTCGCACGATTCAGTCGATTCATCGCCGTTTTCACCAGGGTCGTTCTGTC
TCTTTTTCTTAACCATTGTTCCGAATGCGCAACTGCAATCACATACACTATAACGATATT
AACCTAACAGAGTCGTTTGTAACAAATGAATTGAATTTTTCTATAATTGTGTCAGAAAAG
TACACCAAGACCGTCAG
(2417 bp)

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