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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30246_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_BRE1B_[Papilio_polytes]
Ontology
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.40 TPM:4.42
ORF EntryO_SariMG15164_3prime_partial:A_SariMG_comp30246_c0_seq3
Sequence
(Nucleotide)
CTCCGGATCAGGTTCTTCTTTTTTGACGACAAGTGGTTTCTCATCCGTCTGTTCGCTCGT
CGCGGCCCCGCCCCCCCTCGCGTTCGCATCCTCTAACTCCTTCCTAACCTTATTCAATTC
TTGACTAGAATCTTTATATTTCCTCTTATATCTGTGAACTTCGCCCTTGAGCTGTTGATT
GTGGTTCTGGAGGGAGGTAATTAGATGCCTCATCTCCCTATTGATAGGGCCGGTCTGTTC
GTTGGCCGCCAAATTTTGTTCAAATTCTATTCTCAGCATTTCGTACTCCTTCCTAAGCTG
CCCGAGAACATCTTCCAGTTGTATCATTTCCGCTCGTAGGGCTTTCTGTCTGGCTAATTC
TTCGCTTTCCATAATTTCTAATTGACGCATGTGCAAATTCTTAGCGTTCTGGAGCTGAAG
TCGCGTTTCATCCAGCGCAGTCTTAATCTGCATAGACTCATTGTAGAGCACAGAGAAATT
ACTCTGCAAACACTTGTACTCGGTCGTTTCCACTATCACCGACTCAGGCAGCTGACGGAT
GTCCATTTTCAGTTTTTCAACTTCCTTCAGCGAGTCCTTGTGCTGTCTATGTAGCCGATC
TAATTCTGTGAGACGATTGTTGGCGAGTTCCCGTTGCTCTTCCAATTCAGCAGCAACATC
TTCAAGCTTAGCGTTAGTAGCGCTCGTCGGTGCCGCGGCACTAGCGCCGGCACCCGACGC
CGACGACGCGGGGTTCGCGCCCGACTGATGGTAACTCTTCAACTTCTCTATCGCCTCTGC
AAGGTGATTCTCCAGCTTGTCATTCCGCGAACGCACCTTCATGAGTTCATACTGCAGATC
GTCAATCTGATTTTTTAATTCCGCATTCTCTGTATCTCTACTATTAACAGCATCCTGCAA
TCTTGCAACCCGTAATGTCATAGCGTGGTGACTCTCATGCAACGTGGTGCACAAAGCCTG
GAGGCGACAATTCTCAACTGTGACTTCCTCATTCGTAGCACGGATCACTTCGTCCAGTGA
AGGAGCCGGCCCACCCTCTTCCCCTTCACCTTTAATAGCCCGCCATATTTTATCATTCCT
CTGTTGTAACCTGTCAAATGCTTGTAAAACTTTTGCTACAGCCCTCTTGCTCACTTGTAC
ACGGTTTGCAAGTTGTGCATCCAATTCCTCTTTATCCCACGTTGAAAGTTGCATTAAGAA
CGAAGTTGTTGCTTCATTCTCATTTTTGTTTTCTGATTCATCTGCAGTCTCAGCATCAAA
ACGTTGCAATAAAACTCTTATGTCTTCATTCAACAAATTCCAATATCTATTCACAACACA
CAACACAGCATCGTCCTGGGTCTGTCGCTTTTCTAGTTGTTCAATCCTAGCTCGTAATTC
TGCTTCACATCTGTGACGTTGTTCGATTCTCTGAGCCAATTTTTTGTTTTGAAACTGCAG
AACTTTTATGTCCATTTCTTCAAGAGTGGATACTGGACCTATGAGATGAGGTTCGAAGTG
AACTTTTTTAATTGGAGGCTGGCTGCTTCCATTGCTACCATCTTCAGCTGCACGTTTCGA
CATCTTGACCTACAAAACTCGCTCGATTGTCAATATTGACAACCTGGAATTTATTGTTTT
ACTCCAGTAAGTCAATTTACAAAATAAAGTTCTGTTATTATAACGCTCAGATAATTCATT
GTGACTGACAACTAACAACCCTTACAATAAAAAATTAAGAGATGCTCCTGATGCTAGTTA
CAGTAGTTACTCCACCCCAAAAT
(1763 bp)

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