SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30238_c1_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_THO_complex_subunit_2_isoform_X1_[Papilio_xuthus]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
Transcript
Level		FPKM:3.80 TPM:3.81
ORF EntryO_SariMG15132_complete:A_SariMG_comp30238_c1_seq5
Sequence
(Nucleotide)
TTTAGTTTGTCGTACTTTGTTTTATTTTTAGGCACTTCTTCGCGACTATCACGTGGACGC
GGACGTCGCATTTTTCCTACATCGCCCCGTAATAGCGCAAAAGATCGCCGCTAAATTAGA
ATCGTTACGTAAATCCGAGGCCAAAGTATCGGATAAATCTGATACTGCGGATAAAAGTAT
AGAGAGGTACAACATAGCGTCTAGAGAGGCGTTGGAACCTATAGTTGTCTCTATCACACC
CATGTTACCGACTAGAGTCTGGGAAGATATATCGCCTGAATTCTACGTTACATTTTGGTC
TTTGTCAATGTATGATCTTAGAGTGCCCGTGGAAAGTTATGAAAGAGAGATTGAGCGTCT
CAGAACAGCAGCTGCCAGTGCCGGTAAAGATACGTCTCAGGGTACAAAAGGCAAAAAAGA
TCAGGAACGTCTCAATTCTCTAATTGATAAACTACAGGAAGAGCGTCGTCGACAGCAAGA
GCACGTGTCTCGTGTGACGAGCCGACTGCAGCGCGAGTGCGTTGGTTGGTTCCCCGCCCG
GGCCGCTAAATCCGCTAAGAACGAAACGGTTACACGGCTGATGCAACTATGTCTATTCCC
TCGGTGCGTGTTCACCGCCGCCGACGCGCTTTACTGTGCGCAGTTCGTTCATACCGTTCA
CTCACTCAAGACGCCGAACTTTTCCACGCTGCTCTGTTACGATAGGTTGTTCTGCGACAT
AACATACTCAGTGATGTCTTGCACGGAAAGTGAGGCCGCTCGATACGGCACATTCTTATG
TAAAGTACTCTCGACCGCTATGCGCTGGCACGGGGATAAACAGGCTTTCCACAATGAATG
TGCACATTATCCAGGATTTGTCACGAAATATAGAGTCTCCAATCAATTTACCGAAGCCAA
TGACCATGTGGGATATGAGAATTACAGGCACGTTTGCCACAAGTGGCATTATAAAATAAC
GAAAGCGATGGTGGTTTGCCTGGACTCGGGCGATTACGTACAAATACGAAACGCCCTTAT
CGTTCTAATACGTGTCTTACCGCACTTCCCTGTCCTTACCAAGCTGGCTCAGATCATAGA
GAAAAAGATTGATAAGGTGAAGGAAGATGAAAAAACCCAAAGACAAGATCTTTACGCACT
CGCAACTGTATACAGTGGCCAGTTGCGAAACAAGAATTCTCAAATGATGAGAGAAGCTGA
TTTCCATCAAATGAGTGACAAGCACAAAGTGGCGGCACAAGCTGCCTCTAAAGAGGACAC
ATCGACCGTGAAGCAGGATCAAGAGTCTACATTGTCTCCGCCGCAGCCGCTTGACGTGGA
GAAAAGGGAATTGCGTACAAGCGATCGACGCCGTGAACAATCGGATCGAGATAAAGAATC
GAAACGGGAATCTAAATCTTCCGGCAAGGATAGAATTAAAGACGACATTAGGATTAAAGA
GAAATCACCCAGAGAACGTTCGCATAAGGATGGAGGTTATTTAGAGACAGTGTCACCGCC
ACTTGATCATCGCACTGTTCCTGATGACGTAGAACGAGATGTGAAGCGTCGTAAAGTTGA
AACCAGCGGCAATGGCAAGGGTAACAAAGATATAGAAGAGCGTTCACCAGAGAAGGAAAA
GAGAAAAAGTAAATTAAGGGGAGATGATCGTAAAGAGCGTAAGATGAGCCGTAAGAGGGA
CAGAATAGAAGAAACTGCAATTCTGGAACAAAAGAGACGACGCGATGAACAGAAGGCTTT
ATTGAAAGTGGGAAGTCACCAAAACGGTTCGCAAGATGATCATCATTACGAGAAATATAA
CAAGAGGGATAAATCGCCATTCAGAGACCGTTCACACGAAGAACCCAGAGATAAACATAG
AAGGTCCAATGAATCCAAGATAAGAAGATAAGAACTTGGACAATGTGCAAGAATCGTCTG
ACAGAAGAAGAATAAAATAGCAAGTAAATAATTGTAAAATAATGTTTTAAGAAACTTTTA
AGTATGAAACAATAATTAAATATTTTGACCACACGTAAAAAA
(2022 bp)

- SilkBase 1999-2023 -