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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30223_c0_seq8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
Ontology
GO:0001654 P eye development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007367 P segment polarity determination
GO:0016567 P protein ubiquitination
GO:0030162 P regulation of proteolysis
GO:0031648 P protein destabilization
GO:0042067 P establishment of ommatidial planar polarity
GO:0042308 P negative regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:0046331 P lateral inhibition
GO:0048592 P eye morphogenesis
Transcript
Level		FPKM:0.27 TPM:0.27
ORF EntryO_SariMG14994_complete:A_SariMG_comp30223_c0_seq8
Sequence
(Nucleotide)
GGTTTCGATACCTATTTATTGTTGTGATACATTTATTTATTATATTGCCTTGAATTTAAA
AGTCATATTAGGCTAAAAACTGAAGGATTAAGTCTGCGAAACTTGATGGTTGAACCGGCC
GCGGCTGCTGCGTGCGCTTCAGAAGAATCTACTCTTATCGAAGAGTACCGGGTTCCGCAA
TCTGAGGCGATACCGCGGCCCGATCGGGCGTTGCTCGCCAAGCTGGAGGAAGAGAACAGG
CGTATCGAGGCGGACGCTAAGGCCGCTTCCCTAACAACTGTACATAGCCGGAAAAGTTCA
GACACGTCTCAAATATCTCTGGCTTCTGCGACAAGTTCTGGACACGAGGCTGAAGCACGT
GTCAGCTGTAGTAGCAGTAATGGCGAAGAGGATCTGTGGACTCTGTGGGGCCGCATCGTC
AGCAACTGGGATACCGAGTGGAGGAGGAGGAATCAGTTCGTGCGCGATCTCGTCCGGCAA
GGTGTTCCCCACCATTTCAGAGGGATCGTCTGGCAACTACTCGCCGGCGTCGATATATCA
CCTGAAAAGAAATTGTATGCTTCTTACATTAAGATGCCTGAAGAGGAAGCTTTTGCAGTA
CTAGTTAAAATAATGCAACAGCATCGAATGCGGGACATGTTTAAGCCGAGCATGGCCGAG
CTCGGCCTCTGCATGTTCCAGTTAGAGAATTTAGTCCAGGAGTTACTCCCAGACTTGCAT
GTCCACTTTCAATCACAGAGCTTCAACACGTCGCTGTACGCGAGCAGCTGGTTCCTGACG
CTGTTCACGACGACGCTGTCGCTGCCGCTGGCGTGCCGCGTGATGGACGTGTTCCTCTCG
GAGGGCATCGAGATCGTGTTCAAGGTGGCGCTGGCGCTGCTCACGCTCGGGAAAAACGAT
CTGCTCTCACTCGATATGGAAAGCATACTGAAGTACATACAAAAAGAATTACCATCGAAA
GCGGAAGCCGATCAGGATTCATTCATGAATTTATCGTATTCGATCAAAGTGAACCCGAAG
AAAATGAAGAAACTGGAGAAGGAATACACAGTTATAAAGACAAAGGAACAGGGCGACATC
GCGGTGCTCCGGTGCTTGCGCCAGGAGAACCGGCTCCTGAAGCAGCGCGTGGAGATCCTG
GAGAAGGAGAGCTCGGCGCTGGCGGAGCGGCTGGTGCGGGGGCAGGTGGACCGCGCCGAG
GGGGAGGAGGAGACGTTCGCTCTGGCGCGGGAGGTGCACGCGCTGCGCCGCGCCAACACG
GACGCGCAGCAGCGGCTCGCGCTCGCGAGGGACGAGATCAGGTCGCTGGAGATGACCATC
GCCGAGAATAACTCGAGGCAGTCGTCGCTGGAGGATATGGAGTTTGTGGGAGGCGGGAGC
GGGGGCGGGTGTGGAGGTCCGAAGGGCGAGGAGCTGGCGCGGTGCCTGCAGCGCGAGCTG
GTGCGGGCGCGTCTCCACGCGGCGGAGCGCGACGCCGCCGAGAGGGACCTCGCCGCTCGG
ATCACTGAACTAGAGAACGAGAACAAGACCCTGCGCCGGCAACGCGTCGACAACAACGTC
GCGCACCTACAGGACGAGTTGATAGCGGTGAAGCTACGCGAGGCCGAAGCGAACCTCTCG
CTGAAGGAGCTCCGGCACCGCGTCGCCGACCTCTCGGACGCGTGGACCCGACACCTGCAG
GAAAACAGACAGGAGCCCGCGGCGCCGCCCGCGCAGTCCAACGTCGTCTCGGACATAATG
GCGACTCCCAAGAAACTGCTGCGCGCCTGGGAGGGACGCTCCGCTGACCTCCTCAAACTC
GACGAGGAACTCATGAGCACCAAGATGAGGGAGGTCGACGCCCTCACGGAACTCAAGGAG
CTAAGACTCAGGGTGATGGAGCTGGAGACGCAGGTGCAGGTGTCCGCGAACCAGCTGCGC
CGGCAGGACGAGGAGGCGCGCCACCTGCGCGACGAGTACGAGCTCGCGCTGCAGCGGGAG
CGCGCCCTGCTCGCGCGCCAGAGGGACTTCCACCACAAGTACGCCGACCTCGAGAGCAAG
GCGAAGTATGAATCGATGCAAGCGAACATACGGAACATGGAGGACGCGCAGAGGATAGCC
GAGCTGGAGGCGGAGGTCTCGGAGTACAGACTGAAACACGAGGTGATGGCGACCGAGGGC
GAGCTCAGGAGTAACGTCGACGATTCGGACAGAGTTCGCGAGCTGCAGGAACAGATCGCC
GAAATGAAAGCCGAGGTGATGAGACTGGAGGCGTGGAAGGCGCGAGCGAGCGGTCGCACT
GACGGGGACCGGGAACGGGACCGGGACCGTGATCGAGACCTTTGCTTCGACGACGACGCC
GAGGAGGACGACAAGCTGAGACTGATCCTCCGGCGCGAATCCTCACTCGGTCTCGATCTC
CCGACCGCACTCATGAAACCCTCCTAGCGAACTGTCCACACCAACTCGGGGGGTTTGCAT
AGGAACCCGAGCGACAACCCTACAGGGCTCGGAGCGAGTCACTCGCGCGCGCGACCTCAG
CGGCGACTCGGCTCATTTCATTTATTAATTCACTCTAGTTTGTTTTTATTTATTTGCTGC
AACTCTTCGATCGTTTGTTTATTATATTGTACTAAATTCTTTTGAAACATTTCTTAGAGT
TAATACTCCGTTGATACTGAAATCGTAAATATTACTATGACTAGATTGTTGGTCACGGTC
ACAACCCGAGCCTTGAGTGGTGACCGTCACGAGCATTGATAATTCTATATTCAGTACTTA
ATTATCAATTGTAGTTTAGTCCGTTGGCCTTCATTTTATATTAGTTAAATTATACAACTG
ACTGGTAAAAATATTCATTAAACATATATGTTAAAACACGTTATAAGTAGTATAATTCTT
GGTGCGTCTCCCACGCAACTGATTGATAATAATTATATATTGTTGAATCTTTTGATATTT
CTTTAATAATATAACTATGTTATCCTAAAAGTACTTAGATTTAAAAAGAAATTAATTGTT
GCCAGAATTTTATACACACATGCATACTACATATATATTTATATATATATGTGTATGTGT
GTGTGTGTGTGTGCGTCCCGTGTGACACATGTCTTTGGTATAGATAGGGGCGCGGGTGGC
GAGGGCCGCGGGGCGCGGGTGGCGCGCGGCGCTGACGGCACGGGGAGGCGCGGGCGAGGT
GTAAAGCGTACAGCGGCGGCAAAGGATATTACGCCTGCTTGACGCGCTTCCGCGGCGGCC
CTATCGGCGGTATCTGCTGCTGTTGCGTCGCGAGCGCGCGGAACGCCTCCGCGATCAAGT
GCGGGTGTGAGGAGATCATGTTCTTCCATCCGGCCGTGTCCATCACGTCCGTCGCGTGAC
TTGTGTTTATAAAATCGATGGTTTGAGCCTTGAGTTGATCCGCAGAATGCAAATCCGCCA
GTATAAGTGTATCCGCCGCCGTTTCCACAGATAAACTAAGGCACAATGCCTCTTCGCACA
TAACTTTTAACCGTTCCAATGCGTATTTGTCAGCGGCAGCTAATAAGTCGTCAGCCATCT
TGTCCAGGTTAGGCGCTCGACCGGTGTATATGAAACGCAACATTTCTCTCAGTACTTCAT
GGTCGACGTCCGTTATGTCCACTCTATTTCGTTTTCTCTCTTCCATTTCATGTTCGAACA
TTGCTGCGAACACAGGACTTCGCGCTGCTAATATAGCTTTGTGTGCTTGGAATTCCCTAC
CACCGACGGCTAACGTTACATCGGAAAACCTTTCATTGTCGAATAGAGCTCCTAAGTCGT
CCGATAATCTGCACTCTGGCACTTTGAATTGCACCACGTTGCTCTGCCCACTGATGTTAA
TGCTATCTGCGACCACTGACACCTCGCAGAATATCGTTAACTTATCTTCTGGTAAAAGTC
CGTTCGCTTCATCTAGTAAAAAGTCTCTCCTTATAAATTTTTTGAATCCCCAATCTTTGC
CTTGTACGAATCTGTAGGCCCTTTGTGACTCCATTGCTTTAGTTTCTTCCCGTTTAGCGT
TTAATATCGAAAACTTGAACTTTGCTCGTACTTCTGATTTATTACACGACACTAATAATA
GATATAATGATAAATAGTCTTTGCTCTCTTCGTCGAGACCTTTTGGATTAACACGAAGAC
ACCATTTTAACTTATCACTAGCACCCGCTGAAAAAGTCGATGATTTTAACACTTCACCCA
TTTCTTCTCTACAAAAACTAAAATTGTTTATGGTCCACATATAACTGAATTTAACCACTT
TGACTTGTGTGAAGCACCAGTTCTCCGCGACGGGTGTATTCCCGTCGTGCAAGGGGCTGG
GCACGCGGCTCACCGCCATCCCGCCGGCGCCGTTCGAAGAGACGCGCGCCGACTGCGGAG
CGGGCGCGCCGCCGCCCGACCCGCCACCGCCACACTCGCTGCCTGAACCGAGCTTTAACC
AAGAGGAGCGCGCGGTTTGCTGATTATACCTGGCTAAGGCCATTATTTGTTCGTATAATC
CAATTTTCCGAAATAGTTGCACCACAACGTTCACATAAGAAACAAACACAAATGAAGTTG
GGGAATGCAAAAGAGTCCACTGTAACGAGATCACACCGGTATACGAAAGTGTATATTTAT
TACGTTTGACAGTTTCACTTCACCGCATGGTTAAAAGGTTGTGCGCGATAACCTGACACG
TACTATAGACTCGACGCTCG
(4700 bp)

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