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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30223_c0_seq11
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
Transcript
Level		FPKM:0.97 TPM:0.98
ORF EntryO_SariMG15006_complete:A_SariMG_comp30223_c0_seq11
Sequence
(Nucleotide)
GGTTTCGATACCTATTTATTGTTGTGATACATTTATTTATTATATTGCCTTGAATTTAAA
AGTCATATTAGGCTAAAAACTGAAGGATTAAGTCTGCGAAACTTGATGGTTGAACCGGCC
GCGGCTGCTGCGTGCGCTTCAGAAGAATCTACTCTTATCGAAGAGTACCGGGTTCCGCAA
TCTGAGGCGATACCGCGGCCCGATCGGGCGTTGCTCGCCAAGCTGGAGGAAGAGAACAGG
CGTATCGAGGCGGACGCTAAGGCCGCTTCCCTAACAACTGTACATAGCCGGAAAAGTTCA
GACACGTCTCAAATATCTCTGGCTTCTGCGACAAGTTCTGGACACGAGGCTGAAGCACGT
GTCAGCTGTAGTAGCAGTAATGGCGAAGAGGATCTGTGGACTCTGTGGGGCCGCATCGTC
AGCAACTGGGATACCGAGTGGAGGAGGAGGAATCAGTTCGTGCGCGATCTCGTCCGGCAA
GGTGTTCCCCACCATTTCAGAGGGATCGTCTGGCAACTACTCGCCGGCGTCGATATATCA
CCTGAAAAGAAATTGTATGCTTCTTACATTAAGGCTAAATCGGCATGCGAGAAGGTGATT
CGACGAGATATCGCGCGCACTTACCCGGAACACGACTTCTTCAAAGAGAAAGACGGTCTC
GGGCAGGAGTCGTTGTTCAACGTGATGAAAGCGTACTCGCTGCACGACCGCGAGGTCGGC
TACTGCCAGGGCTCGGGGTTCATCGTCGGGCTACTGCTCATGCAGATGCCTGAAGAGGAA
GCTTTTGCAGTACTAGTTAAAATAATGCAACAGCATCGAATGCGGGACATGTTTAAGCCG
AGCATGGCCGAGCTCGGCCTCTGCATGTTCCAGTTAGAGAATTTAGTCCAGGAGTTACTC
CCAGACTTGCATGTCCACTTTCAATCACAGAGCTTCAACACGTCGCTGTACGCGAGCAGC
TGGTTCCTGACGCTGTTCACGACGACGCTGTCGCTGCCGCTGGCGTGCCGCGTGATGGAC
GTGTTCCTCTCGGAGGGCATCGAGATCGTGTTCAAGGTGGCGCTGGCGCTGCTCACGCTC
GGGAAAAACGATCTGCTCTCACTCGATATGGAAAGCATACTGAAGTACATACAAAAAGAA
TTACCATCGAAAGCGGAAGCCGATCAGGATTCATTCATGAATTTATCGTATTCGATCAAA
GTGAACCCGAAGAAAATGAAGAAACTGGAGAAGGAATACACAGTTATAAAGACAAAGGAA
CAGGGCGACATCGCGGTGCTCCGGTGCTTGCGCCAGGAGAACCGGCTCCTGAAGCAGCGC
GTGGAGATCCTGGAGAAGGAGAGCTCGGCGCTGGCGGAGCGGCTGGTGCGGGGGCAGGTG
GACCGCGCCGAGGGGGAGGAGGAGACGTTCGCTCTGGCGCGGGAGGTGCACGCGCTGCGC
CGCGCCAACACGGACGCGCAGCAGCGGCTCGCGCTCGCGAGGGACGAGATCAGGTCGCTG
GAGATGACCATCGCCGAGAATAACTCGAGGCAGTCGTCGCTGGAGGATATGGAGTTTGTG
GGAGGCGGGAGCGGGGGCGGGTGTGGAGGTCCGAAGGGCGAGGAGCTGGCGCGGTGCCTG
CAGCGCGAGCTGGTGCGGGCGCGTCTCCACGCGGCGGAGCGCGACGCCGCCGAGAGGGAC
CTCGCCGCTCGGATCACTGAACTAGAGAACGAGAACAAGACCCTGCGCCGGCAACGCGTC
GACAACAACGTCGCGCACCTACAGGACGAGTTGATAGCGGTGAAGCTACGCGAGGCCGAA
GCGAACCTCTCGCTGAAGGAGCTCCGGCACCGCGTCGCCGACCTCTCGGACGCGTGGACC
CGACACCTGCAGGAAAACAGACAGGAGCCCGCGGCGCCGCCCGCGCAGTCCAACGTCGTC
TCGGACATAATGGCGACTCCCAAGAAACTGCTGCGCGCCTGGGAGGGACGCTCCGCTGAC
CTCCTCAAACTCGACGAGGAACTCATGAGCACCAAGATGAGGGAGGTCGACGCCCTCACG
GAACTCAAGGAGCTAAGACTCAGGGTGATGGAGCTGGAGACGCAGGTGCAGGTGTCCGCG
AACCAGCTGCGCCGGCAGGACGAGGAGGCGCGCCACCTGCGCGACGAGTACGAGCTCGCG
CTGCAGCGGGAGCGCGCCCTGCTCGCGCGCCAGAGGGACTTCCACCACAAGTACGCCGAC
CTCGAGAGCAAGGCGAAGTATGAATCGATGCAAGCGAACATACGGAACATGGAGGACGCG
CAGAGGATAGCCGAGCTGGAGGCGGAGGTCTCGGAGTACAGACTGAAACACGAGGTGATG
GCGACCGAGGGCGAGCTCAGGAGTAACGTCGACGATTCGGACAGAGTTCGCGAGCTGCAG
GAACAGATCGCCGAAATGAAAGCCGAGGTGATGAGACTGGAGGCGTGGAAGGCGCGAGCG
AGCGGTCGCACTGACGGGGACCGGGAACGGGACCGGGACCGTGATCGAGACCTTTGCTTC
GACGACGACGCCGAGGAGGACGACAAGCTGAGACTGATCCTCCGGCGCGAATCCTCACTC
GGTCTCGATCTCCCGACCGCACTCATGAAACCCTCCTAGCGAACTGTCCACACCAACTCG
GGGGGTTTGCATAGGAACCCGAGCGACAACCCTACAGGGCTCGGAGCGAGTCACTCGCGC
GCGCGACCTCAGCGGCGACTCGGCTCATTTCATTTATTAATTCACTCTAGTTTGTTTTTA
TTTATTTGCTGCAACTCTTCGATCGTTTGTTTATTATATTGTACTAAATTCTTTTGAAAC
ATTTCTTAGAGTTAATACTCCGTTGATACTGAAATCGTAAATATTACTATGACTAGATTG
TTGGTCACGGTCACAACCCGAGCCTTGAGTGGTGACCGTCACGAGCATTGATAATTCTAT
ATTCAGTACTTAATTATCAATTGTAGTTTAGTCCGTTGGCCTTCATTTTATATTAGTTAA
ATTATACAACTGACTGGTAAAAATATTCATTAAACATATATGTTAAAACACGTTATAAGT
AGTATAATTCTTGGTGCGTCTCCCACGCAACTGATTGATAATAATTATATATTGTTGAAT
CTTTTGATATTTCTTTAATAATATAACTATGTTATCCTAAAAGTACTTAGATTTAAAAAG
AAATTAATTGTTGCCAGAATTTTATACACACATGCATACTACATATATATTTATATATAT
ATGTGTATGTGTGTGTGTGTGTGTGCGTCCCGTGTGACACATGTCTTTGGTATAGATAGG
GGCGCGGGTGGCGAGGGCCGCGGGGCGCGGGTGGCGCGCGGCGCTGACGGCACGGGGAGG
CGCGGGCGAGGTGTAAAGCGTACAGCGGCGGCAAAGGATATTACGCCTGCTTGACGCGCT
TCCGCGGCGGCCCTATCGGCGGTATCTGCTGCTGTTGCGTCGCGAGCGCGCGGAACGCCT
CCGCGATCAAGTGCGGGTGTGAGGAGATCATGTTCTTCCATCCGGCCGTGTCCATCACGT
CCGTCGCGTGACTTGTGTTTATAAAATCGATGGTTTGAGCCTTGAGTTGATCCGCAGAAT
GCAAATCCGCCAGTATAAGTGTATCCGCCGCCGTTTCCACAGATAAACTAAGGCACAATG
CCTCTTCGCACATAACTTTTAACCGTTCCAATGCGTATTTGTCAGCGGCAGCTAATAAGT
CGTCAGCCATCTTGTCCAGGTTAGGCGCTCGACCGGTGTATATGAAACGCAACATTTCTC
TCAGTACTTCATGGTCGACGTCCGTTATGTCCACTCTATTTCGTTTTCTCTCTTCCATTT
CATGTTCGAACATTGCTGCGAACACAGGACTTCGCGCTGCTAATATAGCTTTGTGTGCTT
GGAATTCCCTACCACCGACGGCTAACGTTACATCGGAAAACCTTTCATTGTCGAATAGAG
CTCCTAAGTCGTCCGATAATCTGCACTCTGGCACTTTGAATTGCACCACGTTGCTCTGCC
CACTGATGTTAATGCTATCTGCGACCACTGACACCTCGCAGAATATCGTTAACTTATCTT
CTGGTAAAAGTCCGTTCGCTTCATCTAGTAAAAAGTCTCTCCTTATAAATTTTTTGAATC
CCCAATCTTTGCCTTGTACGAATCTGTAGGCCCTTTGTGACTCCATTGCTTTAGTTTCTT
CCCGTTTAGCGTTTAATATCGAAAACTTGAACTTTGCTCGTACTTCTGATTTATTACACG
ACACTAATAATAGATATAATGATAAATAGTCTTTGCTCTCTTCGTCGAGACCTTTTGGAT
TAACACGAAGACACCATTTTAACTTATCACTAGCACCCGCTGAAAAAGTCGATGATTTTA
ACACTTCACCCATTTCTTCTCTACAAAAACTAAAATTGTTTATGGTCCACATATAACTGA
ATTTAACCACTTTGACTTGTGTGAAGCACCAGTTCTCCGCGACGGGTGTATTCCCGTCGT
GCAAGGGGCTGGGCACGCGGCTCACCGCCATCCCGCCGGCGCCGTTCGAAGAGACGCGCG
CCGACTGCGGAGCGGGCGCGCCGCCGCCCGACCCGCCACCGCCACACTCGCTGCCTGAAC
CGAGCTTTAACCAAGAGGAGCGCGCGGTTTGCTGATTATACCTGGCTAAGGCCATTATTT
GTTCGTATAATCCAATTTTCCGAAATAGTTGCACCACAACGTTCACATAAGAAACAAACA
CAAATGAAGTTGGGGAATGCAAAAGAGTCCACTGTAACGAGATCACACCGGTATACGAAA
GTGTATATTTATTACGTTTGACAGTTTCACTTCACCGCATGGTTAAAAGGTTGTGCGCGA
TAACCTGACACGTACTATAGACTCGACGCTCG
(4892 bp)

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