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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30218_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_m7GpppN-mRNA_hydrolase_[Amyelois_transitella]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
GO:0050072 F m7G(5')pppN diphosphatase activity
GO:0071044 P histone mRNA catabolic process
Transcript
Level		FPKM:8.60 TPM:8.63
ORF EntryO_SariMG14955_complete:A_SariMG_comp30218_c0_seq2
Sequence
(Nucleotide)
TTCCAGTCCATATGTTTATTTTGGTTAAATATATGTGTATATATTGTATTTCAGGTAGAT
AAATCAGTGGTTACATTTTAAAAATCATGAATTCTGCGTCAGGAAATTCGAACCAATACA
AACATTCTATTCCAACTGATATCTTGGATGATCTTTGCAGTCGTTTCATAATAAACTTAC
CACAGGAAGATAGGGGTAACCTAGTGAGAATATGCTTCCAGATAGAATTAGCTCATTGGT
TCTACTTGGATTATTACTGTACAGATGAGTCGAAAAGACTTAACCCATGTGGTATTAGGG
AGTTTGCGGCACACATTTTTCAACATGTTCCACAACTCAGAGAACATGTTAGCAGCCTTG
ACGAAGTCCTAGACAACTGGCGTGAATATAAATTGACTGTACCAACATATGGAGCCATAC
TCCTCGATACAGACCTGACTCACGTGTTGTTGGTGCAGTCATACTGGACTAAAGCTTCAT
GGGGTTTCCCTAAAGGGAAAGTCAATGAAGATGAAGAGCCATGGAAATGTGCTGCTAGAG
AGGTGCTGGAAGAAACTGGTTTCGATATAAGCAAATTGATAAACAAAAACGATTACATAG
AGGCCGTGATACACGATCAAATCGTACGTTTGTACATAATAGGGTACATACCGCGCGACA
CGAAGTTCCAGCCGCGGACTCGGAACGAAATCAAAGCCTGCGAATGGTTCCCCCTCGCCG
ATCTACCGGCGAACAAGAAGGACATGACCCCGAAACTGAAGATGGGCGTCAGCCCGAACG
CTTTCTTCATGGTGTTGCCGTTCGTGAAACGAATGAGACGCTGGGTCGCGGAACGTAACC
CGAAAACGTTCAGCACGAAGCGGACCCGGCACAAATCCATGGGCGATCTCGAAGGATCGA
CGGGGAAGAGTAACAAATCCATCTCGCTGGGGCTGCAGAACGAGATCCAAGAGTACCAGC
AGCTGCAGAATACCGAGCCCCGGTACGCGAGTCACAACGGTAGCGGTGTGAAGAATAACA
CAAACGGGTACAACACCTCGAGGAAGGACAGGAAAGCCGCTGCTAAGAGGCAGCTCTTCA
CACCTCAGAATACTCACGCGGAGAGTTCCTTGCAAGTGCAGGAGGAGAGTCACGTCGAGG
AACCTCAGGAGGCTGACGACTCGATCTATTACAATTTCGTGGCTCCGTCGTGGGCCAACT
TCAAGTTTGATAAGCGAGCCATCCTTGAGTCTCTCATTTGAAATATTTGCTAAATGGTGT
CTTAATTACTCCATAATTTATATGGTACAAATAAATTTGAAGATATCAACTGATATTACT
TACATTAGAGAAATA
(1335 bp)

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