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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30217_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_Smaug_[Amyelois_transitella]
Ontology
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0017022 F myosin binding
GO:0017148 P negative regulation of translation
GO:0030371 F translation repressor activity
GO:0043488 P regulation of mRNA stability
GO:0051236 P establishment of RNA localization
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
Transcript
Level		FPKM:8.01 TPM:8.04
ORF EntryO_SariMG14949_complete:A_SariMG_comp30217_c1_seq1
Sequence
(Nucleotide)
ATCCGGCCGCACTACCCGCTGCGCATTAGCAGTTTGCGATGTGTTTGTGAGGATGCTAGT
CGATGGCTTGCTCGGTCATCTGCAGGCAGAGCGCGTCGAGGCTCGAGTACTCGTCGGGGA
GCGTGGTGAGGCAGGGCGCCGGGGGCTGGTGGTGCCGGGGCAGGTTCCCCGGCGGGAAGG
GGGGGTACGAGTGGGACTTGCCGCGCGGCTGGGGGGGCGGCACCGCCTGCTGCTTGCACT
GCGGGCTCCACACGCGCTTCTGATACGGCTTCTGGTATCCGTTGTGCGGGTTCATGCGCC
ACCTGGGTTTGGGTGCGCCGCGCCTGTGCAGCGGGATGTCGCTGACGTGGTGAAAGAACT
GTCGCGGCGGCATCCGATGCCGGAGCCGCTTCAGCGCCTCCTGCAGCTCGGCACTAGCGA
ACGACTCGTGGTGCAGAGCCTTCTCAATGAGCCAGCAGTGTAGCGACATGGGGTCTATGG
GGGAGTCGCGGTCGCCCTCCTCCAGGCCGGCGAGGGCGAGCGCCACGTTCGAGGCGCCGC
CCGCGCTGTTCAGTCTCTTCGACGCGAGATGCAGGACCCTGAGGATGCCGGCCGGCAGGT
CGGATGCCGGCGGCATTGGGCTCAGCAGCACCGCGCGGAGCCGTTCCAGCACCCTCCCCA
CCGCCGGCACCGGGAGGGGGGGCGAAGAGCTCAACTCCGCTTCGATCCCCTCCACGGTGG
CGGCCCGCTCGTTCAGCTTCTTTATCGAGAGCAGCAGCTTGTGCCGGGCGCCCTTCGTTA
CACCTAATTTTTCGAGGTATTTATCATCCATCGCCATCATTTGCTCGTACGTGATATTCG
TGAAGAGCCAAACGTATTTGTGCAGTCTCAAACTCTTCAGCCACTGCGCCACCGTCGACA
TGCCCGGGTGCTCCGCGAAGTTATGGGATCTGAGATCGTCCAGACGCGTCTCGCTCCCGG
CCGTCCCGTACATGATACCTATCGGCCGGATCTGACTCAAACTGTGTTCGCTGGACAACG
AAAAGCTTCTAGGTTTCTGTACAAACGGTTCATCGCTCAAGTTCTCCGCTGACGATGACA
TCTGCATGAACTTCGACGAGGGCGGCGTCAAACTGTTAGACCTTTGCGACTTGGGCTGTG
CTATCGCTGCGTCAAACTGGGATTTCTCCGCTTCCACGCTGATGTCAACATCTCTGCCGT
TCTTAGAAAAGGACTCTAGCAGTAGATCACTACTGAACTGGTCTATGGAATCAAATATAC
TTCTGAATTCAATGTTCTTGCCGATGGTCCGTCTGAAGGAGTTGTTACTGCCCCAGATAT
TCGTGTCGGGTATTAAACATGAGTCTATTCTCTGTTGCCATACACTCTCTGTGTTTCTGT
TACCTGATATATGATTTTCTAGGTATCTCAGCCACTGCTTTAAAACTCTCTGGTCATGAT
GTGTCAGAGCTGGATGCACTAATAAATACGATAACAATTGTCTGCATAACTCAGGTGGTA
CTGATGAACGCCGCGGGGAATCTATACAGCGTTGCACCAGTATCGGAATGCCATTCACAT
ACACATCCTTAGCTCTCTCGTTCTCTGTATTTAGTAGTGGTAATAACCTTAAAAGTTGTC
GGAGGCGATCAACTCCTTCATCGTCGTCATCGTCGCTTCTTGGTGTGAGTAAGTTCGTAA
GAACCACTTCGTCATTGGCGTCGTGTTGTAGAAGCTCGTCCTCCTCATGATGCCGCAGAG
CTGCCTCCACTGCGCGCTGCACCAGTCTCAAACCCGGCCACGGTACTCGACGCGCCAACA
CACACGCTGAAACCGTACGCTCGCACGCACCCCACTGTTCAAATACCCCAGTAACGCCAC
CCAGCTGCTCGTAAAAGGTACCGTTCATTGTGAAGACACCATAGCAGACTGAAGATCAGA
TTTGTTTGTATTGTATTCTACACGTCAATGGTGAATGACAGCTGATCTCCGAGTCAGACT
TCAGTTCTTCACCGGTCAGATGTTTAGTTGCGTGTTGTCGCCGTCGATTAAATATTTATA
AATCCAGATTTTAGGTTGAATTTTATTTGAACATTCACAGGTAGTTTGAAAAACATGAGA
TTTGTTTCGACGAACAAG
(2118 bp)

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