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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30204_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_very_low-density_lipoprotein_receptor_isoform_X8_[Papilio_xuthus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
Transcript
Level		FPKM:0.96 TPM:0.96
ORF EntryO_SariMG14781_complete:A_SariMG_comp30204_c0_seq3
Sequence
(Nucleotide)
TTTTTAATAAATAGTTACAATGCACCAGGCATTACTAATAATATTAAAATGATGGAGCGA
TGATGTATAGTTTTAAAATCTCTAATCTATTCACAGTCTAAGATAAAAAAAAATTAAAGC
AAACTTTTGTCCCTCTTAGTAAATTTAATGTGATAATAACAGGAAAATAAAAGAAAGTTC
TAGAAAGATCCTTTTCCTCTTCTATATACGTATAAAATAATCGACCTCTTGTGATATGAA
TTCCGAATATGAATTACTAACCGTAATTATTATGAGATCCTTAAATACACGGGCGAGAAT
TGTATACAAATGTGCGTGTGGATCGAAAAACAGAACTATATTCCATAGACACAAATATTA
CTTTTTTAAACACAGTTTTAAAACGCAAACGAATTTAAAACGATTTCGCGACGAACTATA
TCATCAGTTATAAGTCACATTCACTGGTTAGCACTTTTATATTTTTAATTATCACAATAT
GTCGTCCTTCGTTTTCTTTTCACATTTAATGACATTATAACGTATTTACTTCCGGCTTGA
ACACTATACAAATTCATTTGTACCGGGTGTGTTGAGGGGTTCTTGAGCCTCTTCACCCAC
AGTACTGGGGTACAGTTTGCTGCCCGGAGCGTAGCCATTTTTCTCTAAAGCAAACTGATC
TTCTGTAGTTTTACGGTATACTGGATTGTCAAAGTTCATCGATGTAACATTATGGTGAAC
GTAATGTCTGTACATAACAACTGCGATCACTCCCGCTATTAATAATACTCCAGAGATTAC
CGCGACAACAATGCCGGCGACTACGCCAGCATCGCGCCCACTGTTTGAGATTCCGGTGCC
TACCTTTGGTGTTTCTGGTACACCATTAACATCTAAGAAACCCAATCTGTCTGGCAAATG
ACCTAGGCTGAGTTTTTCAAAATTATAATGAGATTCCTTGACGGGTTCATCTGTGGTATC
CGGTATTCGATCTAGAGCTGCGTCATTCAAAAACAGATCGATAAAAGGTTGATTCCTATT
TCCGAAACTTTTTTTATCAGTTTCCCAGTAGGCCTTCATTGGCTCAGATTCCGTGTAGTC
TGTTGCAATTCGTTCTGTAGTTGTTTCTACGGGCACCTCGGTCGAATCTTCTTCACTTTT
GAGGATAGCTCGCCCCAACTTTACGAGAAGGACAAACCCTTCTCTTGGTATATTCACCAT
ATGGTTCAAGCTTTCCGGTTAATCATTCACATTCAAAACGATAATTAATCAGTTCTGAAT
ATAGTAGTTGTACATGCCTAGTTACAGGTCTTTCCTCAATTACTACTGTTTCATTTGAAC
CATTACTCGTTATATGCACCTCCTCTGGTATAATCGTATTGTCTTCGACGCACATCTGGT
TGTCGGGGAGTAACCGTAGGCCATTGGGGCAAGCGCAGGAGACGCGGGGCGAATTTGGTC
CTATCCTGGGTGCAGGTAAGCAGAGGTGGGAGCAGTGACCGTTGACCGCCGCGCAATGAT
TTACTCCATCAGGTTGACGGTACGGATGGTACACGTGGATAACCATCGGATTTTGGAGAG
TATGAGTGGAGGTGATAGCTTCGATATCTTTTCCGTTGAACTTGTTAGCGCGGTACACAG
CGGTCTTGTCCCAGTCGGTCCAGTACACCCAGTCTTCGAATGTGGTTATGGAGAACGGAT
GTCGCAGTACATCAGTCGAGTAAAGGACTAGGCGACGGCCGGATCCGTCATAATTGCATG
AGGAGATTGTGTTCATTTTGGCATCCACCCAGTAAACACGTTTGCGCACAAGATCCAAGG
TTAACCCATTGGGCCATTTGACGTCATAGGAGACGATAGTTTCCCTGTGAGAACCGTCCA
TACCAGCTCGTTCGATCTTCGGCACCTGTCCCCAGTCAGTCCAGTACATCCATCCATCCA
GAGGATTAACTGCAATAGCTCTAGGTTCCTCGAGGCGGTCTCGTACAAGTATTTTCCTCA
TGTTTCCCTGTAGATCAGAGAGTTCGATGTGGTTCTTCCCGGTGTCGGTCCAATACAGAT
GGTTGTATATCCAGTCGACTGCGAGCCCGTCTGATGTAATTAACTGTTCGCCTATTACAA
CAGTTCGTTGTGTTCCTTCGTCTATAGGCGCCTTGTATATTTTCTCATCCGTTACATCAC
TCCAAAATATCATTCCCGTTCTGAACACGTAGTCTAAGGCTGTTGCGGATTTAGTATCAT
TGACAATAGCAACCATCTCATGATGGTCCAAGCTGATTTTGCGGATGTCGAAGCGTCTTG
CAAAGAGCAGGGAGGGGTGACCTTCAGTAGCTTTACACCGTGTACGGTCGCGTGGATCAC
GCGCGTACCCAGCGTGGCATTCGCATTTGAACGTTCCTTTCTCGTTGATGCAAACTTGGG
AACACGCTCCGGGATCAGAGCATTCGTCTATGTCTTCACAAGTTCTGTTATCAATTAATT
TGAATCCCTTATCGCAGTCGCAGTAGTAACTGACGGGAGTGTCCACGCACTTTTGAGTGC
ATCCGCCGTTATTCTTTTCACATTCATTCTCACCGCACCTATCTCTGGGTTCATCTTCAA
AACCAGGGCAGTCTGGATGCTTGTCGCATACTTTTGATATGGGTATGCACATGCCACCGC
CACAATCAAATTCTGTCTTTTTGTCGCAGATTGTCTTCGTTCGTGTGCAATTGTATTCGT
CGCTGCCATCAGGACAATCCTTAACTCCATTGCAATAAAGTGCACCAGGAATACAGCTAT
GGTCCTTGCATTGGTACTGGTCGAGTCTGCACGTGACATTCCCCCGGCATAGTTCAGGAG
CTTCGTCACCGCCGTCAGGGCAATCTCTGTCGCCGTCACAGACCCAAGCTTTGTGAACAC
ACGTCATGCGATCGTGACATTCGAATTCAGTAGAAATGCAAGGTGACCTGACCTTCGGAG
TGGTCGCGCAACCAGTTTCATCACTGCCATCTGGGCAATCGATGTCCCCATCACAATGCC
ACCAGGCTGATATGCAATGGCCGTCAGCACAAGCGAAATGTGACTGCGGCTGGCACGTCG
GCGCCGGGCACTTCACTTCGTCACTGTCATCACCACAGTCGTCGTCGCCATCGCAAACCC
AACGCATTTGAATGCATTTACCATTGCCACATGTAAACTCGTCCGAGCGACAGGTCTCAT
TGCATGCTTTCTCGTCTGATCCATCTGAGCAGTCGGGATTGTCGTCACACATCCAAGTCA
GAGGCACACACTCCCCTGGTTTCCCTCTGCATGTGAACTCCTCCGGACCGCAAGCCTCCA
TTTTACATGTTCCAGGTTCTTCGTCAGATCCATCGGGACAATCTTTCTCGTTGTCACATC
GCCAGGATTTCGGTACGCACCTCCCTGTCTTGCATCGGAACTCCGTCGATGTACAAGTAC
GAGTCTCTTTGCATTCTTCGATGTCTTCATCGGAATTATCACCGCAATCGTTGTCTCCTT
CGCACACCCATGATATAGATATGCATCTTCCGTTTGCACACTGGAACTGTTTCAGTGAGC
AAACGCCACTGTCACTGCTATTAGAGGCTACTGCTCCAATCGTTTTGACATTTAAAACAC
ATAGGACTATAAACCACCACATATTGGCAAAATTTCTGAGGGCTGTCAGGCGACAGCCCA
CGAAAAGGAACATCCGTCCTTTGGAAACTTTCGTATTCGCCAAAATCACTTTTATCGAAC
ACACACGTTGAATTTAGAAACAAGTCAATGTTACGTCACTGGCTGTAGATTATATTATAT
GTTTGCAGTCAATGTCACTGTTTTTATTATCGAAGGAGAATATTTTGATTATTGGAATGT
CCGCGATGAGCGTGTTAGTTACTTTTACGTGCCACTGGTGTAAGCGCG
(3888 bp)

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