SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30177_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_ROP_[Amyelois_transitella]
Ontology
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0009416 P response to light stimulus
GO:0012506 C vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016082 P synaptic vesicle priming
GO:0016192 P vesicle-mediated transport
GO:0019898 C extrinsic component of membrane
GO:0019905 F syntaxin binding
GO:0030707 P ovarian follicle cell development
GO:0032940 P secretion by cell
GO:0043195 C terminal bouton
GO:0048489 P synaptic vesicle transport
Transcript
Level		FPKM:18.32 TPM:18.37
ORF EntryO_SariMG14651_5prime_partial:A_SariMG_comp30177_c0_seq3
Sequence
(Nucleotide)
CTTTAGTCTACGATTGAAGATGGCTTTGAAAGCGCTCGTCGGGCAAAAGATTATGAACGA
GGTGATCCGCTATCGCGGACCCAAAGGCAAGGAATCCCAGCGTATAGAATGGAGAGTGCT
GGTAGTAGATCAACTTTCTATGCGCATGGTTTCTGCTTGCTGCAAAATGCATGACATTTC
AGCTGAAGGAATAACTTTGGTGGAAGACATTCACAAGAAACGAGAGCCACTGTGCACCAT
GGATGGTATCTATCTTATAACTCCATCAGAAAAATCTGTGCACGCTCTGATCAATGATTT
TTCTGTTGGTAACCGTATCATGTACCGAGCTGCACATGTCTTCTTCACTGAAGCTTGTCC
TGATGTTCTGTTTGATGAATTATCGCGTAGTCCAGTAGCTAAATATATCAAAACATTAAA
GGAAATCAACATTGCTTTCATACCATATGAACAGCAGGTTTTCTCACTGGACTCGCCTGA
GACGTTCCAATGTATGTACAATCCAGCATTGGCACAAACGCGTAACGCAAACATGGAACG
AATTGCTGAGCAAATCGCAACGCTTTGCGCCACTCTCGGGGAATACCCATCGGTTCGATA
CCGCAGCGACTGGGAACGCAATGTCGAGTTAGCTCAACTCATCCAACAGAAACTTGACGC
TTATAAGGCCGATGAACCAACTATGGGCGAAGGTCCTGAAAAGGCTCGTTCTCAACTACT
AGTATTGGACCGTGGCTTTGACTGCGTATCACCGCTACTGCATGAACTGACCCTGCAGGC
TATGGCCTACGATCTTCTCCCAATAGAGAATGACGTATACAAGTACGATGCATCTCAAGG
GCAGATGAAGGAAGTGCTCTTGGATGAAAATGACGAACTTTGGGTCGAGTTGCGACATCA
GCATATTGCCGTGGTCTCCACATCCGTTACCAAGAATCTGAAGAAATTCACGGAATCCAA
ACGCATGGGCGGAGGTGATAAGCAGTCGATGCGTGATCTATCGCAAATGATTAAGAAAAT
GCCGCAATATCAGAAGGAGCTGTCCAAATACGCGACACATTTACGTCTCGCCGAAGACTG
CATGAAGGTGTACCAGGGCTACGTGGACAAACTGTGTAAAGTTGAACAGGATCTTGCAAT
GGGAACTGACGCCGAAGGTGAAAAAATCAAAGATCACATGAGAAGCATTGTACCAGTGCT
CCTGGATCAGGCAGTTATTAATTTTAACAAGATGCGAATTATCGCTCTGTATATAATGTC
TAAAAACGGCATATCGGAGGAGAACCTGAACAAGCTGGTCACTCACGCCCAACTCGAGCC
CTCGGACAAGCAGACACTGCTGAATCTCGCCAACCTCGGATTGAATGTCATTGTCGATGG
TAACAGGAAGAAGCAATACCAAGTGCCGAGGAAGGAGAGGATCACAGAGCAGACATATCA
GATGTCCCGATGGACTCCTGTAATCAAGGACATCATGGAAGACGCCATTGATGATAAATT
GGATCAGCGCCATTTCCCGTTCCTCGCTGGACGAGCTCAGACTTCAGGCTATCAGGCACC
GACTAGCGTACGTTATGGTCACTGGCACAAGGACAAGGCACAGCAGACTATAAAAAATGT
GCCCCGTTTGATTGTCTTCGTCGTTGGAGGTGTTTGCTTCTCGGAAATCCGATGCGCTTA
TGAGGTGACCGCCGCTCTTAAAAACTGGGAAGTTATTATCGGTTCCTCACACATACTCAC
TCCGGACAACTTCCTTTCAGACTTGAGCTCTCTCACCGCCTAAACACTATCCGCGTACAT
ACTTTACCATTCGTTTGCTCTTGAATTGACTAAGACAACTATGCGAACGAAACGCATAAT
AAATAAAATTAAAAATAAATATATCCCTTAAAACATACTAGTTTGATTAGAATGACAGCT
GTCAAAACTAATGTCACCAGTCCAATGAGAAAGTACTACTCAAATGGGTATAAAAAATAT
GTGCAGTTCGTATATTAGCGTAGCGAAACTAAAACTGTAAAATCGATATTTTTTTATCTG
TGGTTAACACTATGCAAGGACATCGCCATTTACCACAGCCAATAAATATGGCATTGTCTT
GATTGCGTTCTATGACAGCAAAGTGCAAAATTACATGCACGTGGTCTCAGTGACAGCTGT
CATTCTATTAAAGTTACATGCTAAGGGCTGATATAAGTCTTTAGATTTACATATCGCAGT
GAGCAAAAACATAGAAGAAATCATTCGTAATATGTTCTTTTTTCGTTACATTCAAAATTA
CATTTCAAGAAAACTATATAGAAAATGCAATCTTTTTTTTTTAAGTATTTAAAATAACTG
TTGAAAATTATATTAATCTTATTTAAATAAGATACAATTTGAATTTAGAACTTCCTGTTT
ATGTAATATCGCGTGTTGACCTTTAAAAAGACATTCAGTTGTTTTTCACAAAATGGCTCG
TTTAAGAAGTATTTTATCGTTTATAAGAAAATGATTACACACCCTATCGTCATTTGTTTA
TAAATATTATC
(2531 bp)

- SilkBase 1999-2023 -