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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30172_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_A-kinase_anchor_protein_17A_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007165 P signal transduction
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042113 P B cell activation
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0051018 F protein kinase A binding
Transcript
Level		FPKM:7.82 TPM:7.84
ORF EntryO_SariMG14643_5prime_partial:A_SariMG_comp30172_c0_seq2
Sequence
(Nucleotide)
ATTCAAGTATGCAGGGACATATCAGACGCTGTGGCTTTATATTTGCCACAGCGTTTGTAT
TTGAAACCATTTGCCAAACTAAACATTTCTGTTCAGCTTCCAACACACAAGGTACACGGA
AAATCTATCTCCAATTGGGAACTTATGGAGAAACTACGAAAAATGGCCCAACCTGACAAC
TTTTCTGTTCTCAAAGTGTCGAAGCAAAGTTTTGAAGTGATTAGATTTGAAGCGGAACTC
GAATGTCGGGATAAACTCGCAAGGGTGTTAGCGAAGCTCGACGGTCGTGTCGTACAATTA
AACGATTACCCAGATGCGTTGAAAGTGAGAGTGACAGAAAATAAATGTGATTTTCCCACA
CACCATTCATGGGATTCGTTCTTTCGCGATGCGACTGACATGGACGAGATGAAACCCGGT
GAACGTCCAGATACAATTCACATAATAAACCTGCCAATCCGTTGGTTTGTTCATGACCAA
GAACGTGATGAAAATGCACCTCCATCTGAGAGTATATTCAAGAAAGCGTTTGAGAAGTTT
GGTTCTATACGTCAAGTCGATGTACCAGCATCGGATCCATTTAGAATGCAGATGAAAGCA
TCAATACGAGGTATTACTATACCTCCTCAAGAGTCTCTACTTTATTTTGAAGGTTATATT
CAATTTAATGAATATGTGAGCTTTGTTCGTTGTATGGATTCACTAAGAGGAAAGAAATTA
TTAAGAAGACAAGATGATGTAGCTGAGTGGTGTGGCATTAAAGTTGATTTTGATAAAACA
AAACATATGACTGATGCAGCTGTGAAACGTAGAGCTATTGTACGTGAGAGATTGGTTGCT
AGGCAGAGAGCTAAGGAAGAAGAGGAAAAGGCTGAGAAAGAGAAAATAGCCAAAAAAGAG
GCAAAAGAAAGACAAAAATATGAAAATTATGAACGTGAAAAATTGCAAAAGATGAGGGAA
AGAGAAGAAAGGAGAAAAAAGAAGCAGCTTGCTAAATTAATGGAGAATGAAAATATGGAT
CTTAATAGCAAAGTTGCTGAGGAACAAAAGAAGTTACTGAGGGCTCAAAAGAAGTTGCAA
GCAATAAGACTGATTGAGGAACTTTTTAAAAGGATAGAGTTACGTCCGGAGTTACAACGT
AACGGGTTACGTGAAGAGCGTTACTATGGTGCCGGTGAGAGAACTGCTCGGGCGCGTTGT
GTCGACAAATTCAAACGGAAACAGGAAGAGGCAGTTGAAGAGCAAAGGAACCATTTGCAA
AGTGCCCTCGATGGACGAATAGTAATTCGTTCCGCTCTCGAAACGAAGAAACCGAAACGC
GAATCGTCGATAAGCTCGATATCGAGCGAGGAAGATGCAGACTTCAAGAGAATTAAATCG
GAGAAGATGACCACGCCTGAACGTGAGATGGAATATAACAAGACGGCAGGACTATACAGC
GTCGCAGGTCCATACGGGTTCGGATACCCGTTCGGAGCCGTGGCGCCGCCCGCTTACCCA
TATCCGCATCAAACGGCGTCTATGTATTATCCGATGAGAGGTGCGTACTACCCGGCGGAT
ACGTTCGCGCCGCGGAGAGGCTTCCGGGGCCGGGGGAGAGGCAGAGGCCGGGGGCCCAGG
ATGCCCTACTTCGATGGGCCCGACGCCTCACACCAGTACTACAAATACTTCAAGAAACTG
ACAGAGACCGAGAGTCGTAACGAGCACGACGACCGTATCCGTTCTCGTTCGCACTCTCGG
TCCCGGTCCCGGTCCCGGTCTCGTTCCCGGACGCGGCGCCGGTCGTACTCGCGGTCTCGG
TCCCGGTCCCGGTCTCGGCGCCGCTCGTACACTCGTTCGCGGTCGCGGTCCCGAGCCCGG
CGGGACAGGAGCAGGAGTCGCCGTTCTAGAACCAGAAGATCTAGTTCTAGAAGTAGACGC
TCTAGGTCTTATCAGAACCGCTCAAGGTCGCGCTCGAGGAAGAGGTCAAGGTCACGCAGC
CGCAGGGCAAGGACACCGGATAAGACGAAGCAACGTTCACCGGCGCGAACAGATAAAAAG
GGACAGAGTCCACCTAGACCGGACGTGGTGGATAACGGAAAAGTGGAATCTCCGAGAAAA
CGAAGGTCGAAGAGCTGGTCCCTCCCGAAGGACTGCGATAGAAAATCTTGGTCGAGAAGT
CCTAACAACGTACAGAAGAGTTAAATTATTCGTCGAGATATGAAATGATTATTAAATGTA
ATATATATATATTTAAAAAATAAAGTTTTTTTTCTTTCCCCA
(2262 bp)

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