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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30169_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_DHX8_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.05 TPM:6.06
ORF EntryO_SariMG14633_3prime_partial:A_SariMG_comp30169_c0_seq2
Sequence
(Nucleotide)
TGGTGCGCTGTATCTCCGGCACCGGCGTCGGCAGCATCTCGTCCCGGTAGGCGCGCTCCG
TGTACAGCCTGTAGCACTTGCCCGGGCCGGTCCTGCCAGCTCGACCCGCGCGCTGTTTAG
CCGCTGCTTGAGAAATGGGAGTCACGACCAACGAATCCATCCCGGTCTTCGAATTATACA
CCTTCTGTTTCACGAAACCCGGATCCACGACGTAATAGATCCCGTCGATCGTCAATGATG
TCTCAGCTATATTGGTCGCTATGACCACCTTCCTGGACCCCGGGGGAGCGGGCTCGAATA
TCCTCGTCTGCATTTCAGACGGCAGCGCGGAGTAAACCGGAAGGATGATCAGCTCGGGCA
CGTCCTGCCCCAAGGATTTCATTCTCTCGTACAGGATCTCACAGGCGGTGTCGATCTCCT
CCTGGCCAGTCAGGAACAGGAGCACATCACCGGGCGGTTCCCTCAGATGTATCTGCATAA
CGGTGATGAGAGACGCGTCCAGGTAATCCGTCTCGGGTTCCTTAGTATAAAGCACCTCGA
CTGGAAACGTCCTGCCTGGTATAGTGAAGATCGGCGCTTCGAAGAAGTATTGGGAGAACT
TCACAGCGTCCAGGGTCGCCGAGGTGACGATCAGCTTTAGTTCGGGACGTTTCTGTACCG
CTTGCTTCAGCAGCCCGAAGAGCACGTCAGTGTGGATGGTTCGCTCGTGGGCTTCGTCCA
ACATTATCACAGAGTATGACTTCAAGTCGAGGTCCATCAGACATTCGCGGAGCAACATAC
CGTCTGTCATGTACTTGATAATGGTCTCGGGGCTGGTGCAGTCCTCGAAGCGTATGGTGT
AGCCGACCTCCTGGCCGAGCCGGCAGCCGAACTCCTCGGCGACGCGCTTGGCGACGGACA
TGGCGGCGACGCGGCGCGGCTGCGTGCACGCGATCTTGCCGCGCGCCGTCAGCCCGCACT
CGGACAGGTACTGCGTTATCTGCGTCGTCTTACCGGAGCCCGTCTCGCCGATCACTATGA
GGATCTGGTTGTCCGCCACCGCCTTAGTCAACTCATCTCTCAGTTTGTAAATAGGCAGCG
ACTGTCTCTGTTCCAGTAACGATAAGTTAGTTTTTTTCCCGAATGAAGACTTCTTTCCTC
CGATGACATGTTTCTTCCACTCGGGCAAGTCTTGGGGGGTGATCCCTGTCCCCCTCATAT
TCGCCGCCAGGGTTCTGCCATCGCTCTCCGGCAGCGGGTCTATCCAGTTCTTATTTAGAC
CCGTCGGTAAGCTCTCCATCTCTTGTTCTCTCTGTATCATCTTCTGCTCTCTTCTCTCCT
TCGCTAGAGCGGACTGCATCATGGCAGCCTGTGCCAAGGATCCGTCAGGGTTCTTCACGA
TCCTCACTGGCGATAAGTCGTGTAGGGCTCGTCCGTGGCCTTGGAGGAAAGGGGGTTCGT
CTTCCACCAGTTCTATCTCGATGTCCGCTTCGCCATCTTCCTCTTTCGGTAGGAGACCGG
TTTCTTCGTCGAAATCTGGTAACTCACTCTTGTCTATCACTCCTGATGAAATCATCTGTT
TGATCTCCCACCTCTCTGGACTAGATATTCTGGTGACTCTCTTCCGGCTGGAGTCTTCAT
CTGGGTCCAAGCCACCTTGTAACCCTGCTAAAACTGTCGCGGCTGGCGCTGGACGATCGG
GATTGCGACCTTCACGTTCAGCCTCTAAATGAGCATGAGATGTTGGATTCAGATCTTTTC
CAGTCTCTTGACAGACATCCTTCATTGTAAGAGATACTTTTTGTCCAGTTATCGATATAA
CTTTAATCTTTACTCTATCTCCCCTATTTACAATATCTGATACATTATTAACTCTGCCTT
CTGCCCTCAGCTGTGATATATGGACAAGTCCTTCCCATTTTTTTCGTACACCTTCGATTT
GCACGAAACAACCAAACGGCACTATATTTGCAACACGGCCATTATATATTCTTCCGGGCT
CTGGATCATCACTCATTTCTGCATCTGGGCTCTTTTTCCTTGCTCTCTTTCCATAATCAC
TGTGTCTGTCATCTCTTTCATGAGAGTTCGGCCTTTTCCCTCTAGACCTTGACCTTCTAC
CTCGAGATCTAGATCTTCTATTCCTAGACCTAGATCTTCTGCCTCTTGATCTTGATCTTC
TACCTCTCGACCTGTCTAGGTCTCTCCTGTGCCTCTCCCGTGACCTTGATCTATTTCTCT
GATGACTTCTTGATCTCCTTCGTTTCCTTTCATCAGGGCTTCTGCTTTTGTGATCTCTAT
TAATATTTATTTTGTCGTCACTTCTGCTACGCCTTTTTCTTGTATCTCTGGAGTCTTCTG
TTTTTCTAACTCTCTCTCGACTGCGGCTTCTTTCTCTTTTCTTTATATTTTTTGTCTCAT
TCTTTGAGCTTGAATTTGATGGAGCAAGAGCTTCCAATTCTGCCATAGCTTTATCAACTG
TATCATCTTTACTTATTTTAACTTTGGTTTCCTCTGTAAAAATATCTTTTGATGTTACTC
TCTTTGCTTTTTGTTCATTCTCACTATCTTCATCTGATGAGAATACGTCAGGTTTTTTAT
TGGGTATTGCTAAACCTGGAAATTTTTGTGCTAGAGGATTTTTGTTATCTATTTCAGTTA
CCTTATTAGTTGTATTGTTTATGGGTTTCATGTGTTGTATGATACGAAGAAGATTTGTCA
CAAAAGAATCTAAAAATTCAGCTCCATTATCTATGAGAGCTTTCTTAAAATCTTCAAAAT
TTGGATTCTTGTCAGCAAGATCTATGATGAATTCAGCTAAATCCTTGTCGTTTAATCCTA
AATGGTTATCCAGTTCCGTACATACTTTAGAAACAAGTGATAAGTGTTCTAATTTAGCAA
CTTCATCCATTTTTGTATATTTCTTTACAAGAACAAATAATTACAGTAATAAACAAATTC
AACCAAACCAGCGATATTTTCGTTTTATTATTTATTTGTATATTTCCCCTTTTT
(2994 bp)

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