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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30149_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_regulator_of_nonsense_transcripts_2_[Amyelois_transitella]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:6.51 TPM:6.53
ORF EntryO_SariMG14570_complete:A_SariMG_comp30149_c0_seq1
Sequence
(Nucleotide)
AAAAAAATTAGCTCAATTCTCGGTTATATTGTGATAATTTGTTTTTGAACAATTACGAGA
TCCTTTTTTCTGTTTTATTATCAAAAGTGCGATCACTAATTATGACTACTACTGATAATG
ATGGTGAGCAGGGTACAGAAGATAACAATGAAAATACAGAGGAAAATGAGAAAGCTGCAC
TTGCAGAGTATATAACAAACCTCGAATCTAGGCTCAAACAGAAATCAGAAATACGTAACC
TAAATTTAAACTGTGTCCGACCTCCAGACAATCATTTTTCAAAATTAGACTCTGGGCTGA
AGAAAAATACGACATTCGTTAAAAAATTGAAATCTTTTAGTGCAACGCAAATAGATGCAT
TGCTAAAAGATTTTACAGCATTAAACCTGACGAAATATATATCGGAAGTGGCGGCTGCTA
TGGTAGAAGCCAAGCTCAAGATGTCAGATATACCTGCTGCAATAACTCTCTGCTCTTCCC
TGCATCGTACTTACAGTGATTTTTCATCGAATTTTTTTGAAAACTGGCAAAAGATATTAA
CTTTTAAAGCCACAGACAAAATATCTAACTTTTCAAAGCTACGAGTCGATATAAGATTTT
ACGCTGAACTAGTCTCTGTAGGCATTTTTTCAAATAAAACTGGTTTACCTCTATTGGGTA
ATGTACTTACAGTGTTAATTAATATGGATAAAGATGACCACAATAATATACCAATACTAT
TATCATTTTGTAAACATTGTGGTGAAGATTATGCTGGACTGATACCTAAGAAAATAAGAG
ACACAGCAGAGAAATTAAGCATAACTATTCCAAGAAACACATTTCTACCAGCTGAAAAGC
AAGCTGTGGTTAGAGCATTACTTAAAGATTATTTTATATCACTAACAAAGCATCTACTTG
CTGAAAGGACACAGCTTCAAGCTCTTCATGCTGCTAACCAGAGGACTCTGCACACAAGAG
GTGAACTCTCCCAGGAGAGGAAAGATCAATTGGAACAGCACCAGGCAACATATGACAAAC
TTCTCAGTGGTGCCCAAAACTTTGCAGAAGTGCTAGGAGAAGAATTGGGAGAGGCCGGAG
AACCTCCAGCTCTCTCAATGACAGTGATTGAGACACAAGGTACAGTAACTATAGGGGGAA
ATGAAGAGTTTATTATGCAAGCCGGTACAGACCCCTGGCAGGATGAAGATACCAGGACAT
TTTACACTAGTCTACCTGATTTAAAAGTGTTCATGCCTAACTATCAGGCCGTAAAAAGTA
AACCAGAAACAGTTACTGAAGAAATGCTAGATGAAGATTTGAAAGAAGATGAATTAAGTG
ATAGCGAGGAACCACTGACGCTGCCAGATGTGGAACAAGAAGAATCTCAACCTACTAATG
TTTCAAACAAATATGCTCTTGACGCTTTTTTAAATGAACTGCCGAATTGCATAAATCGAG
AACTCATTGATAACGCAGCTGTTGATTTCGTCTTAAATCTAAATACAAAGAATAACCGTA
AGAAACTTACTAGAGTACTGTTTAGCGTCGCCAGGACAAGATTAGATTTGTTACCATTCT
ATTCAAGATTCGCAGCAATATTATATCCAGTGTTGCCAGATGTGTGTGTAGAATTATGCC
AGATGTTAAAATTAGATTTCAAATATCATGTGAGGAAAAAGGATCAAATAAATATTGAGT
CAAAGATTAAAGTGGTAAGATTTATAGGTGAATTAGTGAAATTCGGTTTGTATTCTAAAA
TGGAAGCGCTGTACTGCTTCAAGGTGTTATTACATGATTTCAAGCATCACCACATTGAAA
TGACATGCAATCTTTTGGAAACCTGTGGGAGATTTCTTTATTGCAACCCGGATACCCATC
AGAGAACGATGATATACTTGCAACAAATGATGAGGAAGAAGACTGTTTCAGCCCTGGATT
CACGTTACGTAACTCAGATAGAGAATGCCTTCTATTATGTTTGCCCTCCGGAGGCACCGG
CCCAACCCAAAGAGGAGGAACCAGCTATTCATCAGTTTATTAGGAAAATACTTCACGAAG
ACTTGCAGAAGAGTAACGAGGAGAAGATACTAAGGCTCATGCGCAAAATGAACTGGGATG
ATCCCGAGATAGCGGATGTTGCCATCCAGCATTTAGCTGGCGGTTGGAGAGTAAGGGCCA
GCGCTAGAAGAGCTTTAGCGCGAATGACTGCAGAGTTAGCAGCTTGGCAGGAAGCCGTGG
CACCTGCTGTAGTTGATACTATATTAGAGGAGATCCGCCTCACTATGGAAGACCCTCATC
CGAGATACAACCAGAGGAGGGTCGCAACAGTACGATATCTCGGTGAATTGTACAATTACA
AGTTACTGGATTCACGGGATGTGTTCACCGTACTCTACTCATTCATAACGTTCGGCGTCA
CGAATGACCACAACAACGTTTCACCATTAGACCCACCGGATAACGTGTTCAGGATAAGAC
TAGTCTGCGCGCTCCTCGAGACTTGCGGCGCGTACTTCAACAGCGGTTCGAGCAAGAAAC
GTCTGGACTATTTCTTAGTGTTCTTTCAAAATTACTACTGGTTCAAACACACCGATCCGA
TTTGGAGCGATGAGAATAAATTCCCTATTTACGTGAAATATATATACCAAGAGTGCCTCA
CGATGCTGAGGCCGAAGCTATCGTTATTCAGTAATTGGCAGCAGTGCAAGGATGCCATAG
AAGATCTAAGAAAGACTTTGTACCCTGAGTTGGGTGAAGAGGAATATGATAACGATGATC
AGGGTGATGATAGTGTCAACGATGGGTTGGATACTATTATAGAGACCGACGATGAGACTG
ATAACCCGCAGCTGCCAGAAGAGAGTTCTGATGAAGAACAGATAACAGAGAACACTGCAA
ATGATGATAACGAAATGCAAGATGATATGACTGTTGAATCCAGAAGACCTGCCCCTAAAC
CTGTCGAAGATGTTGAGTTTGAATCGGCATTCGAAAAAATGGTAATGGAGAATATTGCTG
AGAGACAACGGGAAAATAGACCACAGCAGCGGGACATCGCTGTACCGATGACCTGCCGTC
AAACTACCAAGAAAACATACGAACAACTGCTGCAAGGAAAAGAAGGTGTAGAATTTGTAC
TGATGGTCCGTAAAGGTACAAAGCCCCAATATAAGTCATTCAATGCACCCCCTGAATTAG
CTAGTAATCTGCAACAACAAGCGCTAGCTGATAAGCAGGAGATGGAGAGAGTGAAAAGAT
TGACATTAAATATATCAGAGAGACAAGAAGAGGAAGAGTACAGCGCAGAAAGTGGTGGCG
GTTCTGGTGGCATTGGAAATCCCAATAGAGGGCAGCATGTTCGACAGAAGTACCAACACC
CTAAGGGGGCACCTGATGCCGATCTTATATTTGGCCCTAAAAAGTTCAAGTGAAATTTAA
AAAAAAAAGACTACTATAATACATGAAAATAATTGTATATGGGACTGTTATTTGTGCAAA
ACATATTTTGCATAATATATTTACTGGTACTAATATGACCGTATAATGTAATAATTTCGT
TAGACTTTATTTTCAGACTGAAGTACATGTATATAATATTGCAAAATTTATTTTGTACAA
ATAACGAAAATCCGTAAAATATAATTTATGACAGGAATTTTCTTAAAAATACCTTGAAAA
ATTGTTTTTTTAGGTACTAAGGCACTTGTGCAAGATTTTTCTTTGAAGTACCTATCCTTG
TGCCTATTTTTTAATTGTTAATAAAAAAAATGTCTATGTTGAAAAAAA
(3768 bp)

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