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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30109_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006461 P protein-containing complex assembly
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0007163 P establishment or maintenance of cell polarity
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0007409 P axonogenesis
GO:0008289 F lipid binding
GO:0008356 P asymmetric cell division
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
Transcript
Level		FPKM:1.72 TPM:1.73
ORF EntryO_SariMG14320_complete:A_SariMG_comp30109_c0_seq2
Sequence
(Nucleotide)
GAAGCTGGCGTAAACGCCAGGTTACTGCTCAAGGGGTTAAAATTAAATATTTCATTAGAC
AGCCTATATTGTTCAAAATAATATCGTGCGAAACTTTTTACGCAGTTAGTACTTCGCTAT
GACGTCATCAGAGCGGGGTGCCTAGTTAACTTCTACAAGTTGTAATTATAGAATATCCTG
TAGGTCAGTGGTAGTGGGAAAGTTTCCCCGGTCTCCGCGGCGGTGCGCTCTCATACTCGT
AGTAATTGGATTGGGGCCGAACCCCTCCCTCCCTACAGGAGCGCTGTGAGTGGAAGCCAC
CCGCCCCTACCCGACGACTCTCCTCTTCGGCCTTAGCTCTCTGCGCATGCACCTGCCTTC
GCATTTGTCCGATCTGTACTTCGCTTAATTTCTCACGGCGTGCATTCAAGTTTTGTTGGA
TCTCTTCGTAGTTGACGTAATGGCCGGAAGGTCCCCACGCACTGTCTATCGCCTGTGGTT
GATGATGCGGCGGGTCCGGTAGTGGCTGCGTAGGCGGAGCGCGGTACGGCGGCGCACGCT
GTTTTCTATCAGATTTATGTGCGCGGTCACTACTACTTCCAGTACTGCTCTGCCGGGAGT
GTTGAACCTCAGACCTTTGTTGTGTAGGTGGGTTGTCGTTGGGCTGGTGTTCGAGTCTTA
TATGTCGATCGATCGCATCTCGTGATAGTGATTTCTCTGATGCTCTCCCCGGCTGAGATC
GACCGTACAATTCTCCTTCCGCTTTTTTATGAGGCTTCCCTATCCTAAACATAGTTGATA
ATGATTTTAATAAGGAAGGCTTTTTGTGTGAGAGAGACGACTGTTGCGGCGATCCTCTTA
CTATGTCTGGTCCGGTGTTGTCATCAGTCAACCAGTGCTTTAACGGTGGGTGCGCACGCG
CATATATAGGTTCGTTCCGTGGATTCCTTTGGTTTTCTTGTATGGCAGTCTGTAATGATT
CTAGACTCGATGACTTTCGCATGCCCAATGAGGGTCCGACTTGCATCGAGTTAACAGCCT
TTATCTCTTTAATCTTCTTGTATGTGCCGGTTTGCTTGGCGTCGAGCGCGGCATGTCGCT
TCTCGGACATGGATCGTCTCCCCACAGCATCCCGACTGAATCCTGCACCGCATTCGCTAC
CAGACTCACCTCCTCCCCCACTACCGCTCCCCCTCGTGGTTCCATAGTCCTCCTCTATAA
TAACGTTATGGTGAGCAGGGGGCGACCGCGACATATGCACGTGGCCAAGATTCTGCCTGT
AATGGTGCCCGTTCATAACCGGTGCTTCCATCTGCGTCGCCATATAATAACTCTCGTTCC
GCAAACCAGTAAGTCTATCTATCACGGGATTCCATCCGTCCAAGCGACTCCACTCGAAGC
TGTCTCTTTTATTATCATGGGGTATTGTATCTTTGTCCTTGTCTAAATACCCTTTGCTGT
CATCCGATTGGTTGGTAACGTAACTGTTGTTATTGTTTATCGTAACTATGGAAGCGTGCC
TCTTTGTTGTCCGACCGTCGTGGTTGTCGTATGTATCATTTTTGTTGGCATCGTAGTTGT
GATTGTCGAGTGTGTTGTTTTCTTTATCGCTCGTATAGATGACAGTATTGAAGTTTGTTG
AGCTGTTGTCGTTTGAGTTGGTTGTGTCGTTGCCGTTCGGAGGCGTGTCGTCTTTCCATC
GAGCGAGGTTATCCATACTATCAGTTCTGCGGGCGACGGTGAGCGAGATGCTGCCGCGCG
TGTCGGGCGCCGAGTGCAGCAGCGCGCGCCGCAGCGTCTCCATCGCGTCCGCGTTCGACT
GTCCGACCAGCGACACGCCGTTCACGCTCAACAGCTGATCGTTCGTGTGTAACCTTCCGT
CTCTTGAAGCGGCACCACCGTTCAGTACAGATTTAATAAAGATGCCGAGGTCCTGCGGGT
CCGGTCCGACGGTGACTTTCCCTTTAACGCTGATACCGAGACCAGCTTTCTCGGAGTCGT
GCACCGGCACGTCCAGCCGCAGTATCAAACGATTTCTTAAACTTAATATCGAACTAGATG
ATGTGTTTAAAGCCTCTTGTAGCACAAAGTCCCCGTTATGTTCTTTATTTAGTAAATCGT
CCTTGGAGGAACTCTTCTTTATTCTGCCTCGCATAGAGCTGTTGTTGGAACTGTTCTGGT
TTATCGCATTCACTATGGTCGAGACGCGTCCGTTTTCCGAACTCACGCCCATTTCGACCT
GACTCTCTGACCCGATGGCTTTCTCTGTATATTTCGTCGGACTCTGCTGTGGCTCTACTC
GCTGTGTACGATTAGGTGAAGTCCTCTCGATGATTATATCGACAGTGGAGTCAGCAGGCG
TGTTTCTCAGCAGGGCTACCACTTGCTGCTGCGTGAGACCGGACACAGACACGTTGTTAA
CCGACACCAGCTTGTCGCCCGCACGGAGCCGGCCGTCCGTCACAGCCGCACCCTTTGGCA
ATATATTTTTGATGTATATAGGACAGTGTCCACCGGTGGGATTGTCTCGCGTGGTTATCG
TGAATCCCAAGCCCTTCTCGCCCTTGACCAAGGTTACCGCAATCGTTTGCGTCGCACCTG
ATATCGGTTTACTCGTTGGAGTCACTGGAACTTCCATGCCAGATATGGCACGCTCCCTAC
TGCCAACTTCAGGTAAGAGATCTAATGGACGTTCTTGCACCGGATGCACACTTGCGACGT
TGTTCACGCCGGTCACCCACCGCAACATGTCTTCTACTCTATGATTTTGATGATTATTAA
CAGGAGTGTCTTGCCCTAACGGATCCCTCCTAGCGTCTCTCGGAAGGCTTTTACTACCGT
AACTTTGTACTCTCTCAACTGCATCTAACCATATACCACTCCCTGGTCCTGAAAACTGCA
TAGACAACCTATTGGACTGCCTCTGAAAGTGTTGTCCGGAATGTCCATGCCTATCAGAAG
ATTGGTCCGTGTGCTGTCCATCCAATAGTGGATGTACTTTTTGTGTGACTCTACTGTTGT
CATCTCGACAAACGACGGCTGCAGACCAACGCTTGGTTTGTTCTGATACCTGTCTTTGTG
GTGGCATAGTGTCTTGATGTAAAGTCGGCTCGCTACCTCGGCGGACTTGTAAACCGTTTG
CTCCATCCTCCAGATCGCCTTCCCCGACTTCAACGCACGAGTCTGTGTTCGGAACCCGCA
TACTGCCTCCGATACCACCACCACCTCGGAACATGTCCGGAGATGCGGTTCCTGCTGATG
AGCCACTAGCGCCATCAGCCTGAGCTGCCCTTGGCTGTGGTGTTTGGTTAACACATTCCG
CCGTTAATGTTTCCCGGTCGTCAGCAACATCACGCACCCTATCATCAGGATCTAAAATGC
CGCCGGAACTGGCGCGTAATGCTCGGACGCCCACCCATGTTTCTGGACCCGTTTCTGTTC
CCTGTGGCAATATACTCCGTTGCAGTTTCTGTACGGGATATGTTTGCCTCCATCCGAATA
GTCTCACTAATTTATCAGCCATATCTTCACATCTTGGAGTCGAATCCTTCATTTTCACTA
TCACTATTCTTAACACTACCGTTTTATACACATATCTAAATTTTTTCTACTAAGTTTACC
ACCAGTTTATTTTAAATTATTTTTTATCACAGATATCCGGAATACTGCAATATTTAATTA
AGCGCGGAAAAGTGTTATAAAACATGACAAAGCGATTGGC
(3700 bp)

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