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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30105_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_5'-3'_exoribonuclease_1_[Amyelois_transitella]
Ontology
GO:0000723 P telomere maintenance
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004534 F 5'-3' exoribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006396 P RNA processing
GO:0007126 P meiotic cell cycle
GO:0007569 P cell aging
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0071028 P nuclear mRNA surveillance
GO:0071044 P histone mRNA catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:3.69 TPM:3.70
ORF EntryO_SariMG14308_complete:A_SariMG_comp30105_c1_seq1
Sequence
(Nucleotide)
AAAAAAAAACACTCAAAAAATTATCCGTTCCGCAATGTAGGTGAAAGAAATCGTTCGCTT
ATTACTTACATTTCGATAAGTTCAAACTGTAAATATAACAGCTTTCCGACAAAGATAACA
GTAATCATTGCAATCGAGTAAAAGGACGATAATATGAAAAAGTATTGATTGTGAAATAAG
GTTATTTTCTATTTGGGGTCATTTTGGATAACAAACGCGTAATTTGTGTTTTATATAAAA
ACCCACTAAAGGATAAGTGAAAATGGGAGTACCAAAGTTTTTCAGGTATACCAGTGAAAG
GTACCCTTGCCTCAATGAACTGGTAAAGCAGTATCAGATTCCAGACTTCGATAACATGTA
TTTAGATATGAATGGTATTATCCATAACTGCTCACATCCAGATGATTCCAATCCACATTT
TCGGATTACAGAGGAGAAGATATTCCAAGATATATTCCATTATATTGGTATTCTGTTCCA
AATAATAAAACCCAAGAAGTTGTTCTTCATGGCAATTGATGGAGTAGCTCCAAGAGCTAA
AATGAACCAACAAAGAGGTAGAAGATTCAGATCAGCGAGAGAAGCACAAAATGTAGAGGA
GGAAGCTAAAGCAAGAGGTGAAGTCCTGCCAACTGAGAAAAGGTTCGATAGTAATTGCAT
TACCCCAGGCACAGTTTTCATGGCACGTCTGCATGAACAGCTCAGATTCTTTGTCAAGGA
AAAAATATCTAGTGATCCTCTCTGGTCCAAAGTCAAAGTCATATTATCAGGGCATGAGAC
TCCAGGTGAAGGAGAACATAAAATAATGGACTACATTAGATGGTCGCGGTCACAACCTGA
TTATGATCCTAATACAAGGCATTGTCTATACGGACTGGATGCGGATCTAATTATGTTGGG
CATGTGTACGCACGAACCTCACTTTGCACTTTTGAGAGAGGAGGTTAAGTTCAATAAATC
AACACAACGGACAACTAGTCCGGAAGAGACTAATTTTTATCTACTTCACTTGTCGCTATT
AAGAGAATATTTGGAACAAGAGTTCCTCGGTATAAAGGACAATCTGCCCTTTCCTTATGA
TATAGAAAAGATTGTCGATGACTGGGTTCTTATGGGTTTCCTAGTGGGCAATGATTTTAT
ACCCAATTTACCAAATATGCATATCAGTAATGACGCACTGCCATTGTTGTATAAGACTTA
TATGACAGTATTACCTACATTGGATGGTTATATAAATGAAGCAGGTGATTTAAACTTAGC
AAGATTTGAGATATTTATGCAGGAATTGGCTAAAATAGACATGGAAAAATTCCAAGACAC
ATATGCGGATTTGAAATATTTTGAAATGAAAACAGGACGTCGGCCTAACGCTATGGAAAG
GAAAGAGTATAAACCTAACAATGAGGAGACATTCAACGTTGATGTGAACGATATAAAATC
AAACAAACCGGATGATGAATTGCAAGCCCTAATCGATGCCACTCAGGATATGTTTATGGA
CGATATCGACGATGACGATGAATATGAGGATATTAGTGATGAGGAAGCAACCATACAGAT
GGAATTTGCATTACATAAAAAAGATTACTACATCAATAAATTGGATTACTCAAAAGTTAC
CGAAGAAGTTTTAGCGGACCAAGCCGAGGGCTACGTCCGAGCGATACAATGGAATCTCTT
CTACTACTATAAGGGTTGTCCGTCTTGGTGTTGGTACTACCCTCATCACTACGCCCCTTA
TATATCAGACATAAAGGGTTTCAAGGATTTGAAGATCGAGTTCGAATTGGGGGAACCTTT
CAAACCTTTTGAACAGTTGTTAGCGGTGTTGCCATCTGCTAGCAAACATCTGCTACCGTC
GCCATTCCACGACCTGATGACGGATGAAGACTCGCCTATAGTCCATTACTATCCGATACA
TTTTGAAACAGATCTCAATGGCAAGAGGAACGACTGGGAGGCTGTTGTACTTATACCGTT
CATTGATGAAACTAATTTATTATCAGCTATGGCGCCATGCTATCAGAGGTTAACAGAGGA
AGAATTAAGACGTAATACACACGGACCGATGCTTGTCTATAACTGGACACATGAAAATCA
AGGTGAAGTGATAGCTCCGGGTTACTTCTCGTCTATCCTGAATTGTCATGCGATAGAGAC
CCAGGTCTGGAGACAGGAGCTGGACGTGCCAGAAGGGCGACTGAAGCGAGGCATGCTGCC
CAATGCTCGAAGAGATATGCTTTTCCCCGGCTTTCCCACTATGAGACATCTGAAGTATCG
AACTTCCGTTATGAAAGCTAAAGTGAGAGTGTTCGATCAGTTATCGCGTAACGAGAACAT
GATCGTTGAACTGATAAGGGATAATGATAAGGAAGATCCTTTAGAACAAGTTGCTAAGAA
GTTTCTAGGTAAAGTGATATGGGTCGGGTGGCCGCACCTCACTAGAGCCAAAGTGATAAC
GGTTTCCAACGAAAAGATGCGTTTGCATCACGTAAATGATAAAGAAAACAACAGTGTCCA
GTATACGACTGAGACGAACACCGGTAACCTCCACAAGCAATGGATATCGGAGAGATCAAC
TGTACTCGATCACAATAAGAATCGTCTTGGTATTGAACTAGGTGATGTGAATATTCTTAT
TCATGCTGTCAATTTAAAAGGCTACAAGTACATAATCCAGGATAAGTGTCAATTGGTCCA
CGAACCGGAGTGGTGTTCGGTACCGTGCGGGTACGCGTTGCAGGCTGTAGTCACTGACCT
CAAGGCTTACATCATAGACGAGTCCGGGAAGTATAGCACAGTGCACGAGGCATACCCGAG
TGGGGATAAAGTGTTCCTCTTAACCCCCGGACAGTATTACGGATGCCTGGCTACGGTTGT
CGATTCTGAGTCGATACGGAACGGTCGTATCAAAGTGCAAGTTGTAGAGAAACCGGAGCC
GATACCGGTCGTCAATCCGGCTGTTAATCCTTATAAGAACGCGAACCATGCTGCAGCTTC
TTGCGGTATATCAACACATATGCTGTCCCGGATAACCGGTACCATACTTGTCATAGAAGG
AGAGAGAAATAACTTGCCAGTGGAAAATCAGAATAAAATAAACATTGGTCTCAGCTTGAA
GTTTAATAAAAAGAATCAAGAGGTGTCCGGTTACACGCGTAAGTGTTCGGTGACCGGCAC
GTGGCTATATTCAGAGCGGTGTATATCCCTTGTATCGGCATACGCTCAACAATACCCGGG
TTTATTAGACGCGTTGGCACAATGCACCAGGCAGGATATATATTTCGAGAGCGATCTCTG
GCCAAATGAGGTCGGGCAGAAGAAGACCCAAGAAGTGGTCCAGTGGCTGAAGGAACAGCC
CCATATGAAGGCAGCTCGCCGGGAGTGCGGCTCTGAGGCCCTGGAGCCCGAGGAGATGCG
CGCCATCGCCGACCTCCTGGCCGTGGACATCAACCGTATGCGGGGACAACAGAAGAAACT
CACTCTACAGGTCAAATGGAACCTACTCTACAAGCCGGAACTACACGAGGGCAACATCCA
GCCGGACCCGAGCGCTGACTTCAAGGTTTACGATCGCGTCGTGTGCGTCGCTCGCTGCAT
AACGGTGCCGTTCGGCGCGCGCGGTACTGTGACGGCAGTGTACGCGCCCACCGACAATAA
CACCGTGAGGCTATCGGACAAGCTGAACGCTCGTCCCTCCTACCAAGTCATGTTCGATGA
ACCGTTCCCGGGTGCGCTGTCGGAGGATTTATTTGACGAGCCGAGGTTTTATAGAACGTG
TTCGACAAATCTGTTGAACATATCGTACGGCCGTAAGTTGAGGCAACCGGAAACTGTAAA
CGATTGCTTCCAGTTTTCGAAGACGCCGTCGCTGCTCCGGCGCGGCGACGGCCATAACTC
TGCTTTTGCTAATTACAGCCCACCGGTGGACAAATTAATTGCGTTAGCCGATAACAGGGA
CCAGACAGAGAAAAGTACCAATGGACAACCTCAGGACAAAGCTACTAACCTATTAAAGAC
TTTATTGAAAATAAGTGAAAACGAAACTGAATCTACTCAGAAAAACAAGACCGGAGCAGA
GAATGTCCAGAACTGGCGGGCGAAGTCAAGTGATCAAGTAATGCCGTCGCCTTCGCAAAC
GCAACCGCCGCCGATAAAGAATCAACAGCATCAGAACTGGCGTAAGGAGACGAATAATTT
CAACAGCATGAGAACACAACAATCCCAACAATTACTTACGAATGAATGGGTCAATAGTAA
TTTTAAGAATCAACCCCCAATTCCACCGTTCCCAGCCTTCGGGCAACCGTTCCCAGCTCC
CGGTCACAGTCAGATACTGTACCCCCAATTCCAGAATCCACATTTCCAAACGCGCAACCA
GAATCAGAATTTACCTTACCCGGGCAACCAGCGTAACCACCAGTACCATCAGAAGAATCA
AAACCAACATAATAGTAACAACCAGAGCAGCGGACAAACGAACAGACAACACGAACAGCC
CGGCTTCCCTAAACACCTACCGATTGTAAGTGGACCCGACGCCTTAATACCCACTTGGGC
TAGAAACCCAAAACCAGCTTCGAATGCAGAGCAACAGATGAGATCGAATCCCCAGCAGCA
GCAGCAAGCAATAGTGAATCCATTTGTACCGCTTCAAGTACAAACCAGTCGAAGAAGAGT
CCAAAATACAAATTGCCTTTCAAGAAAGAATACTGAAGAATGTTTACAACCGAAATCAAT
ATTACCCAAACCGCAGCCTGCGAATTTACCGATCCAACAACAGAGTGACGCAGCAATTAA
GCCTATAAAGAAAAAGAAGCCGAGAATTGCGGCAAATTTGCCATTTCAGATAGATTAAGA
TTTAATGTGCCAATCTAATTACGTTTTACTTACGAGAGAGAAACGATAAAAAAAATGTGT
TGGACAATTTTAAAATAAAAAGAGAAACGTAATATTAATACTTTGACAGATCCAGTTGGA
TAACATTTATTGTTTCATATTATTTTTTACTTTCACAATTGACTAAGATTCTATTAACTT
TTAGATAGAATCGATTGTACAATTTTTTTTTTATTTATTTATA
(5083 bp)

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