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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30078_c0_seq8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_factor_SPT6_[Bombyx_mori]
Ontology
GO:0000176 C nuclear exosome (RNase complex)
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0030707 P ovarian follicle cell development
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
GO:0035327 C euchromatin
GO:0035363 C histone locus body
Transcript
Level		FPKM:11.53 TPM:11.57
ORF EntryO_SariMG14128_complete:A_SariMG_comp30078_c0_seq8
Sequence
(Nucleotide)
ACATTTTTTCACAGTAAAACTTATAAAATTACTTGTTATCCATTTATTTAGTGTAAATTT
TAGGTAGCTGTTTGTTCAACCAAGGTTGACAATGGCAGACTTTATGGATTCAGAAGCTGA
AGAGAGCGAGTTGGATTCTGAAGACGAAGATCAGCCGACAGAGCGCAAGAAGCCGAAACG
GAAAGCAGCGGTACAGAGTGACGATGAAGACGAAGAAGAAGAAGATGATGAAGAGAGACT
CCGTGAAGAATTAAAAGATTTGATTGATGATGCACCAATAGAAGAATCTGGTAGTGATGG
AGAAGACTCAGATGCTAGTGCAGGGCCGAAAAAAAGAAAAAAAAGTGATGATGAGTTAGA
TGATAGACTTGAGGATGAAGATTATGACCTTATAGAGGAAAATCTTGGTGTAAAAGTTGC
GAGAAACAAGTTCAAACGTTTGCGTCGTTTGGAGGAAGATGATAGTGATAATGAAGGTGG
TGATGATCCTGACTTAGAGAGAGAAGTTATAGCTGAGAAGCTTTTCGTTGGAGGATCAGA
TGAGGAAGATGAGAATCGTTCAGAATCAGCAGCGCCTCGTGAGGTGGAATATGACGACGA
CAATGAGGACATGGAATCAGACGCTGATGATTTTATAGTCGACGACGACGGTAGACCTAT
AGCTGAGCGAAAGAAGAAACGTAAACCGATATTTACTGATGCGTCACTCCAAGAAGGTCA
AGATATATTCGGTGTTGATTTTGACTATGATGAATTCGAGAAATATGGTGATGAAGATTA
TGATGAAGAAGATGAGGAAGACCTGGATGAGTATATCGAAGATGAGGAAGAAGAAGGTGA
GAGACGTCGAACTAAAAAAGGCAAAGCTAAACGGCCAAGCAAGAAATCAATCTTTGAAAT
ATACGAACCTAGTGAGTTGAAACGGAGCCATTTTACTGATTTGGACAATGAGATACGTAA
AACTGATGTACCGGAGCGAATGCAAATTCGAGAGGTTCCAATAACTCCAGTGGAAGAAGG
CAGCACGGAACTAGAAGATGAAGCTGAATGGATCTATAAGCAGGCATTTCTGAAGCCGTC
TGTTTCGAAGCCAGATTCTCAGGAGACAAGAGATAGATCACGAAGAGGTTCAAGTACAAT
AACGAAGATCCGTCAAGCGTTGGATTTCATGCGGAACCAGACTCTAGAAGTTCCGTTCAT
AGCATTCTACCGTAAGGAGTACGTTCAGCCGGAGCTTAGTATCAATGATCTATGGAAAGT
CTACAAATATGATGCCAAGTGGTGCCAGCTGAAGCAACGTAAGGAAAATCTACTCAAGCT
ATTTGAGAATATGCGGGAATTTCAACTGGACAAAGTGATGGAAAACCCTGACGCACCGAT
ACCTGATAATATGAGGCTAATTAAAGACGAAGATATAGAAAGGTTGAAAAATGTTCAAAC
ACCGGAAGAGTTGCGCGATGTCCATACGCATTTCTTACTGTATTACTCGACTGAGCTACC
CGAGATGCAGAAAGTTGCGAGGGTGAAAGAGAGGAAAAGGGAATTGGAAGAGAAAAAGAG
ATTAGCTCGCGAGGAAGCCGAGAGGAACGGTGAAGATGGAGAAGAAGCCGTGGCAGCAGT
GGAAGCGGCAGAGCCTGAAGAGGAAGAGCAGACCGAAATCAAGTACGCGGTTAGGTCTGG
ACCGTATGAACTCTGCAGGAAGGCTGGCATCGAGCCGCTGGTGAAGAAGTTTGGTCTGAC
TCCGGAACAGTTCGCTGAGAACGTACGGGACAACTACCAGCGGCATGAAGTGGAACAGCA
GCCTGTGCCGCCGCTCGAGGCGGCCGCTGAATACGCAGGGGCAATGGGTTCAGCGGCTGA
GGTGGTCCGCCGTGCTGTTTACATGTGCGGGGTTCAATTAGCTCGGGAACCTTCGTTGCG
GGCTACCCTTCGTGACGCGTTGAGAGAGAGGGCCACTATTACTATCAAACCTACCAGTAA
GGGTATCAAGGAAATCGACGAAAGCCACGCCTGTTACAGTTTAAAATATATTAAGAAAAA
ACCAGTTCGCGACCTTACTGGAGATCAGTTCTTGAAGTTGACGATGGCCGCTGAAGACAA
ACTCTTAGAACTAAGCATCAGCGAACAGATTGAAGGAAACACCGGACCCAGCTACCTCGA
GGAACTCAAGCAGTTGTACCAAAAGGACGAATTCGCCGCAACGGTGGAGGCGTGGAACGA
ACTACGTGCCGAAGCGGTCACTATTGCCCTTAACAAAATAGTGATGCCCGAATTAAGAAG
AGAACTGAATGCTGTACTACTTCAAGAGTCTAAAGAATATGTTTTAAAATGTTGCCGTCG
ACGTCTATATGACTGGTTGAAAGTGGCTCCATATGATTCACGTATATCAGATGATGATGA
TGAAGAATGGGACGCTTCTAACGGTCTCCGCGTGCTCTCGATCGCGTACGTGCCGGACCG
GACGCACTCTGCGTTCGCGTGTATTGTCGCCGCGAGTGGCGAGGTGGCCGACCACCTGCG
TTTGCCGCACCTCCTCTCCCGGCGCAACGCTTGGGACGCGCTCGAACGACGCAACAAGGA
GGCCGACATGACCGCACTCAGGAAGTTTATATATCGTAAGAAACCTCACGTGATAGTAAT
AGGTGGCGAGTCCCGGGAAGCTCTGAATGTAAAGGCGGACGTGTCCGAATGCGTCCAGCA
ACTGGTAGAGGATGAACAGTTCCCAAGGATACCAATAGAGATAGCTGATAACCATATTAG
TCAAATTTACAGTAACAGCATTAGGGGAAAGAATGATTTCAGAGAATACCCTGATGTTCT
ACGTCAAGCCATATGCCAAGGTCGACTCCTACAGGATCCTCTAATGGAGATATCACAGCT
ATGTGGTCCAGATGAGGAAATATTGTGTTTCCGATATCATCCCCTACAAGATCAACTGGC
TAAAGAGGACCTACTCGAAGGAATCGAACTTGAGTTCGTGAATAGGATAAACGAAGTCGG
CGTTGACGTCAACGAGGCGATACTGACGGGACGTGGTACTGAACTCTTGCAGTTTGTATG
CGGCTTAGGCCCGAGGAAAGCCCAGGCATTAATAAAACTCTTCAAACAAACCAATCAGAA
ACTGGAGAACAGGACGCAGCTGGTGACAGTGTGCCACATGGGACCGAAGGTGTTCATCAA
CTGTTCAGGATTCATCAAGATTGATACCAGCAGCCTCGGTGATAGCACTGAAGCTTATGT
AGAAGTACTAGACGGTTCTCGAGTACATCCTGAAACGTACGAATGGGCTAGGAAAATGGC
CGTCGACGCTTTAGAGTATGAAGACGAGGATGCCAACCCTGCAGGTGCCTTAGAAGAGAT
CCTCGAAGCTCCGGAGAGACTGAAAGATTTGGATTTGGATGCGTTCGCTGAGGAACTGGA
ACGTCAGGGTTTCGGTAACAAGAGTATAACATTGTACGATATCAGAGCGGAATTGAACTC
CAGGTATAAGGATCTCAGGGTACCGTACCGTTCCCCCACACCGGAGGAAATGTTCAATAT
ACTGACTAAAGAGTCACCGGAAACCTTCTACGTTGGGAAGATGGTGTTGGCTTCGGTTAT
GGGTATAACGCATAGGAAACCTCAAAGGGAGATGCTCGATCAAGCGACACCCGTGAGGAA
CGATAAGACCGGATTGTGGCAATGTCCTTTCTGTTTCAAGAATGATTTTCCGGAATTATC
TGAGGTATGGAATCACTTCGATGCAGGCACATGCCCCGGACAAGCAACTGGTGTCCGGAT
AAGGCTGGACAACGGTCTGTCCGGGTACATACATATAAAGAATTTATCGGACAAACACGT
CACAGATCCTACGGAGAGGGTCAGGATAGGACAGACTGTGCACTGTCGCGTACTAAAGAT
TGATGTGGAACGGTTCTCTGTGGATTGTTCCTCTAAGTCTTCGGATCTGTTGGATAAAAA
CAATGAATGGAGACCACCGAAAGATCCGTATTACGATCAAGAAGCCGAGGACAAAGATTT
ACGTAAAGAAAAGGAAGCGAAACAGACCAAAGAACGGATGCAGTATGTGAAACGGGTTAT
AGTGCATCCGGCGTTCCATAACATATCGTTTGCGGAGGCTGAGAAGCTAATGGACAGCAT
GGCCCAGGGCGAGGTCATTGTGAGGCCTAGTAGTAAGGGTTCTGATCATCTTACCGTGAC
GTGGAAGGTTGCTGATGGTATTTACCAACATATTGACGTCCGGGAGGAGGGCAAAGAAAA
TCAATTCTCTTTAGGTCGAAGTCTCTGGATACAGGGTTCAGAGTTCGAGGATTTAGATGA
AATTATAGCACGACACGTGACGCCGATGGCGGGACACGCGCGCGATCTCATAGCGTACAA
GTACTACAAACCTCTCGGCGGAATGAGAGACAAGGCTGAAGAAATTCTAAAGGAGGAGAA
AGCTAAAAACGCCAATAAAATCCACTACGTCATATCGGCTGCCAAAAATTACCCCGGCAG
GTTCCTGTTGTCGTACCTGCCGCGGTCGAGATGTACCCACGAGTATGTCTCTGTTACGCC
CGACGGGTACAAGTTTAGGCAGAGAATGTTCGACTCTCTGTCTAGTTTACTGAAATGGTT
TAAGGAGCACTTTAGAGACCCTCCCCCAGTGGCCACGCCCGTACAGCGTACGCCGGCGTT
GCGTACGCCGCACGGCGGGATGACGTCCACTATGTACCACACGCCCGCCGCGCACACGCC
CGCGTTCCACACGCCGGCGCACACGCCCGGCCCCGCCTACATCAACACGCCGTACACGCC
CTCCGCTCAGACGCCGTATATGACGCCGTTCGCGACGACGCCACGTCAGCCGGACTTCCT
GACGCCGGCGGCGCCGCGCCACAAGCCGGTGCCGATACCCGCGTACACAGAGCCGGCGGA
CTGGCAGAAGGCGGCCGCTGACTGGGTGCGGCACCGGACCTCGCGCGACACGCCATCCAC
GCCGCGCAGTAGCGAGGGCTCCGTGACGCCGCGACACTCGTCCCGCACGCCGCGACCCGA
CTCGCGCTCGACCCCGCGCCACGAGTCGCGCTCGACCCCGCGGCACGAGTCGCGCTCCTC
CTCGCACGGGCATACGCACGGTCACTCGCACGGCCACTCGCACGGCCGGTCGTCGCGCGC
GCATTCCGTGCGCTCGACCCCGCACACGAACACGTCGCCGCGCTCGATGTCGTTCGGCGA
CGCGACGCCGCTCTACGACGAGAATTAGACTGATTGTGACGCGATCACTCATGTATTTTT
GTATATAGGTCGCGGTGCTTGTTGCCCAACACGTGCGGCTTCGATTTCGTGTTTGTATTG
TCGGTGAAGCGTGCTGGTTAGTCCACGCTGAGCTTTGTGCTCACTTAGCCTTTGATATTT
TATTATTTGGTCAGACCTCGCGATCAACTCGATCGGCTCTTGATTTGTTACTCGTAATAA
ATAAACGTAAAGTCTGCTAAACATCTACGATAATTTGAAATAGTTATGCAATTTTATGTA
TACTCAGAGTCTTGAGATGCGTGAAATATATTTAAAACATTATATTCTAAAATAACACAT
AAATTATCTAAATTAAAAATATAATGCTGTTAATACACGTACGGGCCGGACCGCGGACAC
GGTACGTCGAGCGGCCGAGGTCATCAGTCACCTAAGTAGGAATGGGGAATAAGAGTTTTC
AAAAAGATTGATTTTTTTTTTCGATTCACATAATATCGATGTCCAAGAAATATATCTTTT
TTCTATTTGTTTTATTTGACTGTTTATTCGTAAGTAGTATTCTTCCAGTGGTCGAAATTA
GACAATAATTATAATTTTTTACAAAATCTGTTTCCAGTTTTTTTATTAACAGCACTTAAG
GTCCAAAAATGCCTAACCTACCAAGGAAAAATGATAATGAACTGTTTTATTAAATCGAGT
TTCTTGCCGGCTTTTCTCGACGGGGTTGTTTTCTGAACCGGTGGTAGTTTTTTGACGT
(5998 bp)

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