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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30058_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Amyelois_transitella]
Ontology
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
Transcript
Level		FPKM:8.86 TPM:8.88
ORF EntryO_SariMG14047_5prime_partial:A_SariMG_comp30058_c0_seq1
Sequence
(Nucleotide)
CTTTTATATAATTGCAAAATATGGGTCCGGTCAGAAAAATAAACAACCGATTGGTTTATG
AAAAAAACAAACAATTTCGGATTAATTTATTTCTCTGTCCGAACTAACAAATTTAATGGA
ATTCAATAGGTTACAAATATTCAGACCTTATTTTGAACATTGTACAGAGACGGACATTGG
GTATATATATATATGTATCAATATGACCATAATTATTATTGTAACACGAGCTCTTACTGA
ACTCCAATTTAAAAACCCGTTTTCACTCAGTTTGTATGAACTTCTACGGCGGCTTATTTC
TTAGCTTTCTTAGAACTACGATCGTTCTCCCGGCTCTCGTCGCGAGCTCGCTTGTGGGAC
TTCTGATCGCCGGAGTGTCTCTTCGAGTCTTTGCTTGAGGACTTGTTGTGTTCGCTCTTC
CGGTCGCGTTCATGGTGAGACGACTTATGGTGTTTATCTCGGTTCTTGGAAGGACTGCTA
CTGTTCTTTGATGGGCTCTTATGATTTGAACTCTTATGGTTGGAGCTCGAACTCTTATGG
TTCGAACTTGAACTCTTGTGGTTGGATGAACTCTTGTGGTTGGATGAGCTCTTGTGGTTG
GAGGAGCTCTTGTCGTGTTTGCCCTTCTTGCCGCCGCCGCCGTCCGAGTCGTACGACCGT
CGGGGGTTTCCTCCCTTCCGTTTACGGTCGAAATCTTCACGGTCGTAGATACGCTCCTTT
TTATCTTCCTCGGCCGCTTCTCGTTCCAGATCCGACCAGTCTTTACCGGATTCTTCATCT
TCTTCTTCACTATCCCCAGACGCATCCGACTCATCTGACGCCTCGGAATCGTAATCGGAA
CCGTCATCGGATTCTTCCTCCGTTTCCGCATCAGTCGGTTCGTATGCGTCATCTTCTTCT
TCAGATTCTTCGTCCTGCTGATCGTTTTCAGCATCGGACTCGGGATCTAGGAAGGACCAG
CCCCCGTTTTCAAAGAACCCTTCGATATCATCCGTGATGGTCTTCATTACTTTCGTCCAA
TTGAGTGATTGAATACCTTCTGAGTAACGTATATCGCAAGAATTTAACCACTCCTTGACA
TGGTCCAGCATGTTCATGGGCACAGCGTTCACCATAGCCACTTTCTTTGCATAGTCTTTG
AACACAAACACCATATCGAAGTTCTTCAGGTGGAATTGCACTCTCTCGAAATGCACTAAC
TCGACGTCTTCTAAAGCGATGACAAACGGCGGCCATTCCGTCAGGTTGACGAGTGCTCCT
GATGTCGGCTGAAGGAGTACTGTACTTCGGAACGGTGCACCAGGGAATCCTAATTCTCTG
AACGGAGTATCGAATTCCACCTCCTGTTTGGTCATGTTCTCGACTCTCTCGCAGAAGCTT
TTGAAGGCGACTTTGAGCTTGTGACGTAGCTCTCTCTCGCTCTGTTCCGCCGCGAGGTCG
TCTCTGTCGTGCATGTGCTGATGTTTGCCCAAGTCCGTTGTGATCTCACCCACCTCCGTA
TAGAATTGCACGTCGACATGTTTCTTTTTCCCAAACATAATAGCGTGTTTCAAATGGAAA
TGCAACAGTATAATCATTTCTCCATCACAGGGCTGGAAGAATGCATTCTTTATGTTGTTA
TATAGGATATCCACTTTATCCCCTCTAACTGAAGTGAATCGGAATCCATTAGTATGGGAT
TCCAGTGAGCCGCTCATTCTTTTGGTCACTATATTAGGTCTTATGTATAAGTCTTTTAAT
TTCGGGTTGCCTTTACTCTGCGATAACACTAAAGTGTCTTGTTTCACTAAATCTTCCTTT
TCTCTTTCTTCCGCTTCTCTTGTTTTGAACTTCTTCTGCACTTCTTTAATAAGTCTAAAA
CCTGTGTTTAGATTCGAAGACGGCGGAGATATTTCACCAGGTTCTTTAGTGTTTGTACTT
CGATAGGTTACCTCTTTCACAAAAGTGGCATCAGGTTGGGTGTAGTTACCACCCTCGTTC
CTTCCCATAGTGGCACCGGGATGAAAGAAATTTATCCTGAGATAGGTGTAATCACCCTCC
ACTGACTGGGATATGTTCTTTATAGTTGAGATGTGGAATGGTACCGGGATACCGAATATC
GGCAGAATTATAGTTTCGTATTTTCGATCAACATATAATTTGAGTTCTTTAACTTCATTC
TCTCTAGGCATCTGACTAATACTTTTGTATGAGACTGTACTTTTTCGTAATTTCTCTGCA
TCTTTACCGCTGGACTGTTTCGCAAGACGTTCCTTTGCCTTTTCATTTAAAGTAATAGCT
AATTCTCTTTGATGTTCTTTGCGTTTCTCTTCTGATGAATGTTCCGTACGAAGTTTAGAC
TCTATAACCGCCGTTCTTTTGCCTCTGCCGAGTATTTCAGTCTTGTTTTCCTTTTCTTCC
TCTTCTTCCTCATCATCATCCTTTAAGAAGATACCTATGTTTTTGATTTTCTTCTTAGAC
TGTGTTAATAAAGACGCTGGCTGTTCTTCATTTACTAATACTGTGTCACCGATGAAAAGA
GCGTATGTCTTTCCCTCTTTTTCAGTCGCAGCACTATTTGTTAAATTTGCCAAGCCAATA
TTAATATTAAAGACCATCCCTTTTTTCGCTACCACTGACGTTTTCGGACCTATAACTATA
GAACTTTCTCGAAATTCTATCCCCATCGCGAAACCAAAAGTTTTTGTAAGGTTATCCACT
AAAGCCGGTTTCTCTTTTTTTGCTAATTCTAAACCAGCTTCATAAACAGTAGACAATTTG
GCGCCAGCAACGAGGCGTTTCATTACTTCTTCTTCTATGTTTAATAAAAAATTATAATTA
CTCTGCACTTCATCTGTAGGATTGACCAGCAAAGTACGGACTATATTCGA
(2870 bp)

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