SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30048_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X2_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:0.46 TPM:0.46
ORF EntryO_SariMG13992_complete:A_SariMG_comp30048_c0_seq2
Sequence
(Nucleotide)
TTTCAATATAGAATATTTCTAATTTAATTATATATGTATATATTGTCTTATGTTCACAAA
TGCAATATTTTATTAGTTAAAAAATACTACTAAAAATAGACAAAAAGTAATATTATTGTC
TACATATTCCTAAGTTTTATTTTTTACGTCATTTGTATAAATCTATTGGGTGTTTATATT
CCAACAGATCTCCCATAACAATTCAGTTCCAGGGTAAAAATGCAGTATTTTTGTATAATC
TGACGATCGCAGCGTACCTAATACGTATACTTACATAAATAATAATTAATATAAGACAAG
CCCAAGCCAAATGTCATTGTAGATGTATGTAAACTATGATTAGGACTGAGAAAGCGGCGA
CGGCCAAACAGAGCCGCGCGCGGAGACAGGCGCGGCGACTAGTCGCGCACAGGGGCCCTA
TATCCTCGTCGCCTTCCTCGCAACTACTGAAATCTGTATCGAATTGGGGCCTTACGTAGT
CGAAGGCGCGGAGTAAGTCCGGGGAAGCTTCCTGCCGGACCATCAGGGCCTCCGCCGCTT
CCAACTGCGAACTCGACCGGCGGATGAGCGACTTCACTTCCTCCGACTCGGAATCCGAAT
CGGGCCCGCTCCAATTCCTCCGACTGTGCTTCTTGGGGCTCGTCGATTCGTCCTCCGAGT
CGGCGCTGCCCGTCGATCTCCGGCGCAGTTCACTGATCGCGATCTTCTGTAACTCTGTCT
CGCCGTCGTTATCCGTCCTCCGCCTTCTGTTCAACGAGTCCAGTAAGTCCGGGCGATTGT
TCACCTCGGTGTACTCCAACGAGCTGTTCAGCTCGTCGCTGGTCAGGTTCGAGCTGTGCC
GCCTTCGGCTCAGCGCCTGTATGTTGAGCAAGTCGAATTCGGGCGAGCGTTTGCTGTTCT
TACGCTCGCATTCCGACTGTTTCCTGCGTCTCGCCCCTTCGCTGCTCTCTATACTGGTGT
TATTTCTGGACCTTTCCAAGCTGTCGAGCAGTGATTTTTTACGTTCAGCACTGGTCATTG
ATTTTTTTGGTTTTCTCGATGGCGTTTCGACAGGGGAATTTCTGGTGGGCCGTTTGTGGC
GGGGTAGGCTTCGTTCTCTGGATACTTCCGAGGGCGGTCGACGTCTGCGGGTGCCGCTGG
GACTGTGCTCGTACTCCGGCTGTGCCGACAAGCTTGAGCAGCAATCCGACTGCGAGTCCA
AGAAAGCTCTATAGTCGTCACCGAATTCAAGTAAACGTCGCGCTGCATCCGAATCTGGAG
CTTCGGAGTAAGGTTCAGAGTTATATTTTTCCTGATAGAAGTCCCACGCTTGCTCGGAAA
ACGAGCTGTGCTCTTCTGTACCGGCGGTCACGCTCTTGTCTACGTCGGAATCCTTGTCCA
TGCTCAGGTCCCACAACTGGTTCGGGTCGCCGAGACTCAGAGCTATGAAGTTCTTCTCCC
TCTCCAAGCTCCTCGCTAGCCGCGGCCTCACGGCTCCACCGGCGGGCCCGAGTTTGAATT
CAGCCTTAACGTTCACCGCCTCGGCTGGTTCGGTTTGTTCAGGAATAGCGCTCTCCTCCC
TCGTTGAGATGTGTGTTTTTTCAATGCTCTTACGTAGGTTTGCGATTGTGGCCAGCTGCT
GTTTAATTAAACCTTCGTCGCTGTCGTTTCCAGATGTCGATGTCGTGTCAAATCTGCTCT
TTCTACTGGTGGCGGGGTCGCTGGCGGCACTCCTCTCGTTCTTGTCTTCGATTTCTGGAC
TGAGTCGTCCGCAGAACGACAACGACTTGACGAGCCGGTCGCGCCGGTCCCGCCGGACCG
ACGTGTCGTTGTGCCGACGCAGTTTGAGACGTTTGCGACGCAACCAGCATTGTTTATCGT
TCGCTTCTACGCAGGACGTGCACGCTTCCGTCATTGTGTTTGTGCTGGACACGTGACCCT
GTACAGTGGTGGAACTGCCGCGAAGCTTCGAGTTAGAGTTAGCCGGAGTGACTCTCTGAG
GCGAGGCGAGCGTGTTAAGCGCGGACTCGGATATAGACATGTTGTGGGACATAGCGGTGA
CGTCACCGGCGGTGGGCGTGGCCGCGAGTGACGCGCCCGCGCCGCTCAGCTGTGACAAGC
ACGAGACCGACCACGGGCGAGCGCTGTTACCGCCGCGCTTCTTCCGCATTTGCACCTTTC
CGTGATGTGTCGGTGTAACTGTGCACGTGGAAGTACTCATATCCATCGAAGAGTGGATGT
TCCTTTCTTCTGATGTCAATGACGTATCCACTTCGCTCTCTGTGGTGTATTCACCAGATG
CGTCGTAACTTTCCGTGCCCTGATTGCTATCATTCTTATCATCTGAACTTTGATTCAGCC
ATTCCTTTATCCTAGACATTTTATTCCTACTCGTATTCTTTCCTTCCTCTTCAAAGGTTA
ACGGTTTGAAATTTCTCGATCCCTTTTTTTTAGACAATGCCTGTTTTTGTACCAGTTCCT
CTGCTTGGTTCACCAATCGTTCTATATCCTTGCACATTGCGTTCTGATCGACTTTCAGTA
AATCAGGCGTCGATGATTCCAGTTTTGGTTTAGGCGAATCGAGTTTATCTTTATCTTTTA
TATCGTCCAAAGGTAATTCGCATTGTATTTCAATAGATGATGTCATAAGATCAGTTGAAT
CATCGTTAGCTATTTTCGGACTACCGACGTAAGTCCATTCTTCTTCTGACGATTCTTCTT
GGCTCTTCTCATCTGTTTCGATCATTTGCCTATCGGAATCCGTATCATGGTGTCTGAAAT
AAAACGTTGCCAAGTGTTTTGATTTTCGGTCAGTTTGGTTAAATTTTGACGTGTCTACAG
GTTTTTTTCTCTTTATAACTGTAGGCGGTGTTCTGATTTTGTCTTCGGTTATGGTGTTCT
GTGCTTCGATGCCGTCAATCTGGTCGGTAGAAGGCACTGTCTGATCGGTGGGTCTAACGT
CCATATCGTCGTAAGGTCCGGGAACGCGTCTCTCATCCGCCATGTTTATCTGTTCTCGCA
TTAGTTCTGATTCACAATCGGACCCGAAGCCGCGCCACGTATACGTTGTCAGCACATAGT
CTTGCTCCTCCTCTGAGGCAGATTGTCTGCTATCAGTAGAATTATCCCTGCAGCGTGCAT
TAACCGGGGTGCGCTGTCTTCTTGGACTTCTAGGGCTTCTTGGAGAACCACGCCTGCTTA
GTCTCGGCTGCTTTAATGCTGGTTCGTCGTCGCTATCACTTGCTGCTTTTTCTGATGCAC
AGCTCTGGTTATTGACTTTGGTTAAACACGCTTCCAGATGACACTGCCACTCGATGGCGC
GAAGATATAAAAGTTGCCAACGCCGTTCCAAGGCGCGTGCTGAATCACCCCCGTGGCACA
GACGCACCACTGAGTTCACTATACGCCCGTGACATTCCACGTCACGTTGTAATACCTGAT
GTTCTCTTAATTTCCTCATCAGCTCGTGGTAAGACGCCGACCTGGCTGCAGCTAATGAAG
GTGGCGGCAATCTCCCTTCCATACAGTGCAACCAGCGGCGTAAACAACGTAACTCGTGCG
CGGTGTCAACAGTATCAAGATTCTCATCATCACGGTGCTCCTGATCTGGGCTGAGGAGAA
GACGTAAAGCTTCCCATTTGATCTTCAAATGTTCTATTCGCCACGTGACCTCTCCACTAG
CTTCAGGGATCCGTTCAAGTATTGCGCTTGCTTGTTCTATAAACTTAGCTCGTCGCGGTT
CCACTGACACCAATTCGGACATACGACTCAATCTAAGTTTCCTGTTGGACAAATTCTCGG
GACTAGAATATATCTCTTCTTGCACCTGCGTGAGCCACTGACAGAGTTCGTTGAACTCCG
TGATCAGCTGGTTGAGCGACCACTGTCGGTTAAACCCCGAAGTGGGATTTAGCAACCGCG
GTCCGGTTTGCAAAGGCGTTGAATTATGGGATAACAATTCACCGTTTGCCTCCTTGCAAG
AATCTATGATCTGGTTGTCCATTATGTAGTCATAGTGTCGTTGCAAAAGTGGCCAGAGGT
CGTCACCAGCGCTGCCACCGCTTGCTGTCGAGCCCCAACTTCGGCGCCACGCTTCACGGC
ATGGCTCCTTCCTTTTTTTAGTAAGGCTATGATAGGGTCGCTCGAGTTGCTCGCAATGGC
CGCCAGTCGGCGCTGGCGCACTCCGCAGCGACGACAGCGAGAAGCTGCTCTTCATGGCCG
AATGTTCGAAACTTGTAGTGGACATTTCGTTATTCACCGAGAACATCTAATTGAATCGAT
TTATTATATAAATCAATTATAGGGTTCCCGGAGTCGTTTTGTACTCTCACGTCAGTTCTT
TGTACTTCCTCTTTATTTCACTTAATGTTTAATTCTAAATTGCTTCGTTTTAAATAGTGC
TATGGCGACTAGATTCGTTGAATTAAAATTATAAGTACAATAAATAGTGTCGCATTCATG
TTATGTTGCGATACCCATTTAGTTGTCGAGTGCATATTGGTTTGGTTAGTTTTTCGGTGG
TCACATTTTCTTTGTCAATTTCTTCTGCTTCCTTTTTCAGTTCAATATTTGCCGGTCGGT
CCTATACATAGCACTCCATTGTGCGATAATTGGGATGTCGCTGGAATATCCGGCTACAGG
TGCACTCAACGACACTTGGACACTTGCAACCTTGCAAATGCAATATAATCGCCACACACT
TCTAATAACACAAAAACTTCACAAGATAAACAAAAACAACATTTATTTGAATAATTATTG
TCATATTTTACCAAAGCCTCACTAGAAATGTACGTTTATATATTTATTATTAAGAAATTG
GGCTAACTTAGTTCTCCGAAAACTGCACAACACAGACAATCCGTGCCTCAGTCACACTCA
AGGAATATAACTTACACAATGTTACTATTGCA
(4892 bp)

- SilkBase 1999-2023 -