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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30030_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.75 TPM:2.76
ORF EntryO_SariMG13919_complete:A_SariMG_comp30030_c1_seq2
Sequence
(Nucleotide)
TGGAATATTGTTTTATTTCAACAACATCCATGATTTTTCTTTACCTTATGGTAACCTAAA
TTTAGTATAGAGTGAACATATTAGACCATGAATTTATTATATGCAAATTACAAATTAATG
TTATATTCAAAATCCATAGTTGATATTGGATATTCAGATGAGACTATTATTACTACATTT
CATTTTCCTGTTACAAAATTAGTATTTGGTCTTAAATACATGATAATTAGTAGAGGAACC
ATTAAAATAGATACTGACCTGAGATCCTCACCTGTAATTAAAACCATTAACATTAAACGG
TATAGGAATAAAACTCACCTAATTTCCATCTTCCTGCCCGACAACCTCTTTGTATCTAGC
TATCATCAGCTTCTTGACAGTATCTCTATACGTTTCGCCCGGCGTTGGTGTGTAGATGCC
CCGTTTCTGGCCGAGACCAGCCAACCCCGGTCTCTGATGGGCTTCTATAGGGGCTGTCCT
ACCCTGTTCAGTTTTACCCAAACCCTTACCCTCTGACCATCCCATTTTCTGAAGCATTTT
GCCACCAATAGTATCGACTACAGACGGAGGTGGATGAGAAGGAACAGGTGGCCCCATCGT
TTGGGAATCATAGTGCTTTCTAACAATGGGAGTATCATCTTCACCAAACTTTAACCTTCT
TTCCGCAGCTCGGTCCCTATAACCGTTTAACTGAGGTAATAAGTCATTTTTCTTTCTAAA
CTCTTCCAAGTTCTGTTTGTGCAAATCTGACATTGTCTTATGCTTTGTGAGTATTTCCGC
GGAGGGGAATTTGCGTTTACATAAAAGGCAAGTTAATTTAGACCAGTCAATGATCCCTTC
ATCGTTATCCTCTACTGCTTCATTAACTTTTTTCACTAGAAACTCTTCAGCAGATGGAGG
TGGTGACAACTCCCTCACATGAGTGACAGATGGTCCTGCTCCTAAAACTGAGAAACCTAT
ATCAGCTGATCCTTTACTGGCACTCGTGTCCAGAGGTTGTTCCATCACAATGTTACTTCT
GGCATTCTCCTTCTTCTGGTTTAATGTCCGAGCCCATCTTTCCATATCCTTAGCAATCTT
CTTTGCAACTTTCACTTTATCTTCTTTATCCCTTTTCTTTTTCTCTTCTGGCTCTTTGTG
TGTTATATCAGAAGCCTGAGAGGGATTCTGTGCATTCATCTGTTCACCACCTGGCTGCGG
TTGCCCAGCAGCAACATATGTGGAAGACATTCCATCCCAATACATATATTGGTTTACTTG
GCTATTATAGAAGTACTGGGTACTTCCATCATAATATAAACCAGTAGATGGGTCATAGTA
GTAACCAGAAGTCTCATCATACATAAAAGTTCTCACATCTGGTGCAGTATAGACTGTTCT
TCCGTCACCTGTTGGTACCTTCATTGGTGCAGTTACTTGAGCTGATGTTGCACCAAAAGT
TGGAGTCGAGTTTGGAGTCCATGACAAATTCCTTGCTTGAGCAGCACTGATAGCAGACTG
GGCTACAGCCGCAGCTGCATTCACCCTATCTGCTTCTGATAATGCCTGTGTAGCTGTCAC
ATTTCCACAAGTAGAAGCTTGTGAATAATAGCCAGCATAATCAAGGTTATTTGGTTTTAC
AAATTTCTTAGGTTCATTGTAAAAAGTAATTAATACTTCTCGTTCATCAATTTCCAATGG
AGGCTGCAAATTGGTCATCTCAGTATATGCAGCAGTTGAGTCAGCTATTGAATTGAAATT
AATAAATGCTAAACATTTAGAAGCTCCTGTCAATGCCTCTCTGCCAATAGTGATTCCGAT
AATGGAATCAAGTACAGTTTTTGAACATTTATCCTTTATAACTTCAAGAATCCTTTCTTC
AGTTGTCAAAGCATCTAGTCGCCGGAACAGGAGACGTTTAGTTATTCCTGATTTCTCACT
GATTCTATCTGGATCACCGTTGAAGATGATACCTTCTGATTTTTTACCATTGCAAGCCCT
TCTATAGCATACTTGGCGCCTTTTAAAATTATTCAGGCCACATTTACAAACCCAATCTCC
CGGAGACGCGTTTATTGGGTGTTGCTCATCATGAGAGTGTTTTTCTTTGTCATAATCAGT
ATCGTGTTTGTCTTTTTCATGACTATTTGAACGGCTGCTTGATCGAGAAGTCTTCCTATC
AGACTCACCGCTGATACGGGGCGGTGATGGTGGAGTTGGAACGTACGCGTCCTCATGACG
TTTGGGCGAACGTTTTCTGTCGCGGTCGCGCCTGTCTCGGTCGCGGCGGTAATCACGCTC
GTGCCGATCGCGACGGTCATCCTTATCGTAACGTTGGCGCTCGCGTGGTGGCGACCGCCG
GTTCGGACTTAAGCTGCGTCGTAACTCCCACACAGGTGATCGACCTCGACTTTCCCATCT
CGCGTCGGACTCCCACCTCGTTCCGCGCTCTTCACGCCCACGCCACGACATCGTAGCCTG
TGAACATCATCCGTAACAATAAAATTCTTGCACTTACACATTTCCTGTTGTCGACCCATG
ATGATTGCGAATACCCAAATATTATCTTTCTATATAACCTTCCTTTTCCCTTTTTACCTG
CTGTAGCAATCACTTGTGGTATACGTTATCCTTCAATGTTTACTGAACACGTTTTAAATC
TTATTTTATCACGTTATAAGCGTTAAGAGAAAACTATACTAATTTAGGTAATGCGACATT
CACATCAAGATAGTAGATACAAA
(2723 bp)

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